RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 TNS3Q68CZ2 1445 aa11.75□□□□□ -0.53
RAB3GAP1-205ENST00000489858 SCN11AQ9UI33 1791 aa11.74□□□□□ -0.53
RAB3GAP1-205ENST00000489858 EIF2S2P20042 333 aaKnown RBP11.74□□□□□ -0.53
RAB3GAP1-205ENST00000489858 PDE1AP54750 535 aa11.74□□□□□ -0.53
RAB3GAP1-205ENST00000489858 CHPF2Q9P2E5 772 aa11.74□□□□□ -0.53
RAB3GAP1-205ENST00000489858 SALL3Q9BXA9 1300 aa11.74□□□□□ -0.53
RAB3GAP1-205ENST00000489858 TMEM94Q12767 1356 aa11.74□□□□□ -0.53
RAB3GAP1-205ENST00000489858 COL18A1P39060 1754 aa11.74□□□□□ -0.53
RAB3GAP1-205ENST00000489858 DDX11L8A8MPP1 907 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 ERC2O15083 957 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 RAB11FIP3O75154 756 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 PHF14O94880 888 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 HSP90AA1P07900 732 aaKnown RBP11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 MX1P20591 662 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 MCM4P33991 863 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 DDIT3P35638 169 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 MPRIPQ6WCQ1 1025 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 PKD1L3Q7Z443 1732 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 SSH3Q8TE77 659 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 DNAAF4Q8WXU2 420 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 RABGEF1Q9UJ41 708 aa11.73□□□□□ -0.53
RAB3GAP1-205ENST00000489858 PARP4Q9UKK3 1724 aaKnown RBP11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 MRC1P22897 1456 aa11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 PNMA6EA0A0J9YXQ4 647 aa11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 RGS20O76081 388 aa11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 PTMSP20962 102 aa11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 USP26Q9BXU7 913 aa11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 USP44Q9H0E7 712 aa11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 PHAXQ9H814 394 aaKnown RBP11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 STAP2Q9UGK3 403 aa11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 HDAC5Q9UQL6 1122 aa11.72□□□□□ -0.53
RAB3GAP1-205ENST00000489858 C5P01031 1676 aa11.71□□□□□ -0.53
RAB3GAP1-205ENST00000489858 ADCY9O60503 1353 aa11.71□□□□□ -0.53
RAB3GAP1-205ENST00000489858 HEG1Q9ULI3 1381 aa11.71□□□□□ -0.53
RAB3GAP1-205ENST00000489858 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
RAB3GAP1-205ENST00000489858 ALDH1L1O75891 902 aa11.71□□□□□ -0.53
RAB3GAP1-205ENST00000489858 RAPGEF4Q8WZA2 1011 aa11.71□□□□□ -0.53
RAB3GAP1-205ENST00000489858 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
RAB3GAP1-205ENST00000489858 KCNQ3O43525 872 aa11.7□□□□□ -0.54
RAB3GAP1-205ENST00000489858 TATP17735 454 aaPredicted RBP11.7□□□□□ -0.54
RAB3GAP1-205ENST00000489858 COL9A1P20849 921 aa11.7□□□□□ -0.54
RAB3GAP1-205ENST00000489858 MCCP23508 829 aa11.7□□□□□ -0.54
RAB3GAP1-205ENST00000489858 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
RAB3GAP1-205ENST00000489858 HSP90AB4PQ58FF6 505 aa11.7□□□□□ -0.54
RAB3GAP1-205ENST00000489858 BEND3Q5T5X7 828 aa11.7□□□□□ -0.54
RAB3GAP1-205ENST00000489858 GBP4Q96PP9 640 aa11.7□□□□□ -0.54
RAB3GAP1-205ENST00000489858 PI4KAP2A4QPH2 592 aa11.69□□□□□ -0.54
RAB3GAP1-205ENST00000489858 PPP1R42Q7Z4L9 355 aa11.69□□□□□ -0.54
RAB3GAP1-205ENST00000489858 PI4KAP1Q8N8J0 262 aa11.69□□□□□ -0.54
RAB3GAP1-205ENST00000489858 HYPKQ9NX55 129 aa11.69□□□□□ -0.54
RAB3GAP1-205ENST00000489858 SPG7Q9UQ90 795 aa11.69□□□□□ -0.54
RAB3GAP1-205ENST00000489858 MEGF6O75095 1541 aa11.69□□□□□ -0.54
RAB3GAP1-205ENST00000489858 LAMB4A4D0S4 1761 aa11.69□□□□□ -0.54
RAB3GAP1-205ENST00000489858 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
RAB3GAP1-205ENST00000489858 GIGYF1O75420 1035 aaPredicted RBP11.68□□□□□ -0.54
RAB3GAP1-205ENST00000489858 DDX58O95786 925 aaKnown RBP11.68□□□□□ -0.54
RAB3GAP1-205ENST00000489858 ZC3H6P61129 1189 aaKnown RBP11.68□□□□□ -0.54
RAB3GAP1-205ENST00000489858 RAB3GAP1Q15042 981 aa11.68□□□□□ -0.54
RAB3GAP1-205ENST00000489858 PROX2Q3B8N5 592 aa11.68□□□□□ -0.54
RAB3GAP1-205ENST00000489858 L1TD1Q5T7N2 865 aaKnown RBP11.68□□□□□ -0.54
RAB3GAP1-205ENST00000489858 KIF1BPQ96EK5 621 aa11.68□□□□□ -0.54
RAB3GAP1-205ENST00000489858 ESYT1Q9BSJ8 1104 aa11.68□□□□□ -0.54
RAB3GAP1-205ENST00000489858 NLRP2Q9NX02 1062 aa11.68□□□□□ -0.54
RAB3GAP1-205ENST00000489858 CPDO75976 1380 aa11.67□□□□□ -0.54
RAB3GAP1-205ENST00000489858 TRIM6-TRIM34B2RNG4 842 aa11.67□□□□□ -0.54
RAB3GAP1-205ENST00000489858 SRGAP3O43295 1099 aa11.67□□□□□ -0.54
RAB3GAP1-205ENST00000489858 SURF6O75683 361 aaKnown RBP11.67□□□□□ -0.54
RAB3GAP1-205ENST00000489858 CD2BP2O95400 341 aaKnown RBP11.67□□□□□ -0.54
RAB3GAP1-205ENST00000489858 KSR2Q6VAB6 950 aa11.67□□□□□ -0.54
RAB3GAP1-205ENST00000489858 EPAS1Q99814 870 aa11.67□□□□□ -0.54
RAB3GAP1-205ENST00000489858 XIRP1Q702N8 1843 aaKnown RBP11.67□□□□□ -0.54
RAB3GAP1-205ENST00000489858 EPB41L2O43491 1005 aaKnown RBP11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 ONECUT3O60422 494 aaPredicted RBP11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 ANXA1P04083 346 aa11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 CSB-PGBD3P0DP91 1061 aa11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 PHKG2P15735 406 aa11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 MTX1Q13505 466 aa11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 RHPN1Q8TCX5 695 aa11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 TNPO1Q92973 898 aaKnown RBP11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 DDX21Q9NR30 783 aaKnown RBP eCLIP11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 MAP3K2Q9Y2U5 619 aa11.66□□□□□ -0.54
RAB3GAP1-205ENST00000489858 SPATA31A3Q5VYP0 1347 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 USP42Q9H9J4 1324 aaKnown RBP11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 A0A0G2JS52 829 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 TRAK2O60296 914 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 NBPF7P0C2Y1 421 aaPredicted RBP11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 CHMLP26374 656 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 ANAPC15P60006 121 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 OS9Q13438 667 aaPredicted RBP11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 TSHZ3Q63HK5 1081 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 ERC1Q8IUD2 1116 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 IFNL2Q8IZJ0 200 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 ANKK1Q8NFD2 765 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 RILPL2Q969X0 211 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 SLC52A2Q9HAB3 445 aa11.65□□□□□ -0.54
RAB3GAP1-205ENST00000489858 C9orf78Q9NZ63 289 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms