RNA–Protein interactions for RNA: ENST00000489549.5

GABPB2-206, Transcript of GA binding protein transcription factor subunit beta 2, humanhuman

TSL 3

Gene GABPB2, Length 915 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB2-206ENST00000489549 TWISTNBQ3B726 338 aaPredicted RBP18.34■□□□□ 0.53
GABPB2-206ENST00000489549 C7orf43Q8WVR3 580 aa18.34■□□□□ 0.53
GABPB2-206ENST00000489549 ISCA1Q9BUE6 129 aa18.34■□□□□ 0.53
GABPB2-206ENST00000489549 UTP14AQ9BVJ6 771 aaKnown RBP18.34■□□□□ 0.53
GABPB2-206ENST00000489549 LTBP3Q9NS15 1303 aa18.33■□□□□ 0.53
GABPB2-206ENST00000489549 PRPF40BQ6NWY9 871 aaKnown RBP18.33■□□□□ 0.52
GABPB2-206ENST00000489549 PHAXQ9H814 394 aaKnown RBP18.33■□□□□ 0.52
GABPB2-206ENST00000489549 ZC3H4Q9UPT8 1303 aaKnown RBP18.32■□□□□ 0.52
GABPB2-206ENST00000489549 NFKBIEO00221 500 aa18.32■□□□□ 0.52
GABPB2-206ENST00000489549 SOGA3Q5TF21 947 aa18.32■□□□□ 0.52
GABPB2-206ENST00000489549 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
GABPB2-206ENST00000489549 CACNA1SQ13698 1873 aa18.32■□□□□ 0.52
GABPB2-206ENST00000489549 SNED1Q8TER0 1413 aa18.32■□□□□ 0.52
GABPB2-206ENST00000489549 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
GABPB2-206ENST00000489549 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
GABPB2-206ENST00000489549 SALL2Q9Y467 1007 aaPredicted RBP18.31■□□□□ 0.52
GABPB2-206ENST00000489549 C21orf2O43822 256 aa18.3■□□□□ 0.52
GABPB2-206ENST00000489549 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
GABPB2-206ENST00000489549 C9orf131Q5VYM1 1079 aa18.3■□□□□ 0.52
GABPB2-206ENST00000489549 LAMB2P55268 1798 aa18.3■□□□□ 0.52
GABPB2-206ENST00000489549 SH3TC1Q8TE82 1336 aa18.29■□□□□ 0.52
GABPB2-206ENST00000489549 VAMP4O75379 141 aa18.29■□□□□ 0.52
GABPB2-206ENST00000489549 LMNB1P20700 586 aa18.29■□□□□ 0.52
GABPB2-206ENST00000489549 PRELPP51888 382 aa18.29■□□□□ 0.52
GABPB2-206ENST00000489549 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
GABPB2-206ENST00000489549 STK31Q9BXU1 1019 aa18.29■□□□□ 0.52
GABPB2-206ENST00000489549 CACNA1FO60840 1977 aa18.29■□□□□ 0.52
GABPB2-206ENST00000489549 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
GABPB2-206ENST00000489549 DDX58O95786 925 aaKnown RBP18.28■□□□□ 0.52
GABPB2-206ENST00000489549 RASSF7Q02833 373 aa18.28■□□□□ 0.52
GABPB2-206ENST00000489549 EXOSC9Q06265 439 aaKnown RBP18.28■□□□□ 0.52
GABPB2-206ENST00000489549 NLRP3Q96P20 1036 aa18.28■□□□□ 0.52
GABPB2-206ENST00000489549 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
GABPB2-206ENST00000489549 TIAM2Q8IVF5 1701 aa18.27■□□□□ 0.52
GABPB2-206ENST00000489549 C3orf67Q6ZVT6 689 aa18.27■□□□□ 0.52
GABPB2-206ENST00000489549 RIC3Q7Z5B4 369 aa18.27■□□□□ 0.52
GABPB2-206ENST00000489549 METTL22Q9BUU2 404 aaPredicted RBP18.27■□□□□ 0.52
GABPB2-206ENST00000489549 RNF181Q9P0P0 153 aa18.27■□□□□ 0.52
GABPB2-206ENST00000489549 DICER1Q9UPY3 1922 aaKnown RBP18.27■□□□□ 0.51
GABPB2-206ENST00000489549 CCDC93Q567U6 631 aa18.26■□□□□ 0.51
GABPB2-206ENST00000489549 KSR2Q6VAB6 950 aa18.26■□□□□ 0.51
GABPB2-206ENST00000489549 RPGRQ92834 1020 aaKnown RBP18.26■□□□□ 0.51
GABPB2-206ENST00000489549 RBM17Q96I25 401 aaKnown RBP18.26■□□□□ 0.51
GABPB2-206ENST00000489549 ATP5J2-PTCD1G3V325 749 aa18.25■□□□□ 0.51
GABPB2-206ENST00000489549 SLC4A2P04920 1241 aa18.25■□□□□ 0.51
GABPB2-206ENST00000489549 CC2D2BQ6DHV5 1058 aa18.25■□□□□ 0.51
GABPB2-206ENST00000489549 CCDC191Q8NCU4 936 aa18.25■□□□□ 0.51
GABPB2-206ENST00000489549 TAOK3Q9H2K8 898 aa18.25■□□□□ 0.51
GABPB2-206ENST00000489549 GPBP1L1Q9HC44 474 aaPredicted RBP18.25■□□□□ 0.51
GABPB2-206ENST00000489549 GRIPAP1Q4V328 841 aa18.24■□□□□ 0.51
GABPB2-206ENST00000489549 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
GABPB2-206ENST00000489549 RTKN2Q8IZC4 609 aa18.24■□□□□ 0.51
GABPB2-206ENST00000489549 SYNE4Q8N205 404 aa18.24■□□□□ 0.51
GABPB2-206ENST00000489549 CCDC88AQ3V6T2 1871 aa18.23■□□□□ 0.51
GABPB2-206ENST00000489549 PI4KAP2A4QPH2 592 aa18.23■□□□□ 0.51
GABPB2-206ENST00000489549 E9PSI1 815 aa18.23■□□□□ 0.51
GABPB2-206ENST00000489549 SF3B3Q15393 1217 aaKnown RBP18.23■□□□□ 0.51
GABPB2-206ENST00000489549 G2E3Q7L622 706 aa18.23■□□□□ 0.51
GABPB2-206ENST00000489549 PI4KAP1Q8N8J0 262 aa18.23■□□□□ 0.51
GABPB2-206ENST00000489549 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
GABPB2-206ENST00000489549 MYD88Q99836 296 aa18.23■□□□□ 0.51
GABPB2-206ENST00000489549 ZNF219Q9P2Y4 722 aaPredicted RBP18.23■□□□□ 0.51
GABPB2-206ENST00000489549 MAP3K2Q9Y2U5 619 aa18.23■□□□□ 0.51
GABPB2-206ENST00000489549 HCLS1P14317 486 aaPredicted RBP18.22■□□□□ 0.51
GABPB2-206ENST00000489549 FKBP4Q02790 459 aaKnown RBP eCLIP18.22■□□□□ 0.51
GABPB2-206ENST00000489549 FLIIQ13045 1269 aa18.22■□□□□ 0.51
GABPB2-206ENST00000489549 FAM89AQ96GI7 184 aa18.22■□□□□ 0.51
GABPB2-206ENST00000489549 PSMD1Q99460 953 aa18.22■□□□□ 0.51
GABPB2-206ENST00000489549 ABCC4O15439 1325 aa18.22■□□□□ 0.51
GABPB2-206ENST00000489549 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
GABPB2-206ENST00000489549 IGKV5-2P06315 115 aa18.21■□□□□ 0.51
GABPB2-206ENST00000489549 SLFN5Q08AF3 891 aa18.21■□□□□ 0.51
GABPB2-206ENST00000489549 CWC25Q9NXE8 425 aaPredicted RBP18.21■□□□□ 0.51
GABPB2-206ENST00000489549 LRRC37AA6NMS7 1700 aa18.2■□□□□ 0.5
GABPB2-206ENST00000489549 TCERG1O14776 1098 aaKnown RBP18.2■□□□□ 0.5
GABPB2-206ENST00000489549 KIF3CO14782 793 aa18.2■□□□□ 0.5
GABPB2-206ENST00000489549 PPEF1O14829 653 aaPredicted RBP18.2■□□□□ 0.5
GABPB2-206ENST00000489549 BBOX1O75936 387 aa18.2■□□□□ 0.5
GABPB2-206ENST00000489549 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
GABPB2-206ENST00000489549 TRMT2AQ8IZ69 625 aaKnown RBP18.2■□□□□ 0.5
GABPB2-206ENST00000489549 KDM2BQ8NHM5 1336 aa18.2■□□□□ 0.5
GABPB2-206ENST00000489549 CDHR2Q9BYE9 1310 aa18.2■□□□□ 0.5
GABPB2-206ENST00000489549 IRS4O14654 1257 aaPredicted RBP18.19■□□□□ 0.5
GABPB2-206ENST00000489549 OLFM4Q6UX06 510 aa18.19■□□□□ 0.5
GABPB2-206ENST00000489549 ATP6V0A2Q9Y487 856 aa18.19■□□□□ 0.5
GABPB2-206ENST00000489549 GLTPD2A6NH11 291 aa18.18■□□□□ 0.5
GABPB2-206ENST00000489549 C1QTNF8P60827 252 aa18.18■□□□□ 0.5
GABPB2-206ENST00000489549 NEXNQ0ZGT2 675 aa18.18■□□□□ 0.5
GABPB2-206ENST00000489549 GRAPQ13588 217 aa18.18■□□□□ 0.5
GABPB2-206ENST00000489549 DDX46Q7L014 1031 aaKnown RBP18.18■□□□□ 0.5
GABPB2-206ENST00000489549 TMC4Q7Z404 712 aa18.18■□□□□ 0.5
GABPB2-206ENST00000489549 MIER1Q8N108 512 aa18.18■□□□□ 0.5
GABPB2-206ENST00000489549 GRAPLQ8TC17 118 aaPredicted RBP18.18■□□□□ 0.5
GABPB2-206ENST00000489549 ZNF526Q8TF50 670 aaPredicted RBP18.18■□□□□ 0.5
GABPB2-206ENST00000489549 WDR90Q96KV7 1748 aa18.18■□□□□ 0.5
GABPB2-206ENST00000489549 NEURL1BA8MQ27 555 aa18.17■□□□□ 0.5
GABPB2-206ENST00000489549 SP8Q8IXZ3 490 aa18.17■□□□□ 0.5
GABPB2-206ENST00000489549 ZNF428Q96B54 188 aa18.17■□□□□ 0.5
GABPB2-206ENST00000489549 FKBP5Q13451 457 aaPredicted RBP18.16■□□□□ 0.5
GABPB2-206ENST00000489549 DNAAF4Q8WXU2 420 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms