RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 RASSF7Q02833 373 aa24.53■■□□□ 1.52
MRPL55-230ENST00000489430 TRIM28Q13263 835 aaKnown RBP24.53■■□□□ 1.52
MRPL55-230ENST00000489430 NLRP3Q96P20 1036 aa24.53■■□□□ 1.52
MRPL55-230ENST00000489430 CCDC93Q567U6 631 aa24.52■■□□□ 1.52
MRPL55-230ENST00000489430 FAM9BQ8IZU0 186 aa24.52■■□□□ 1.52
MRPL55-230ENST00000489430 ZNF526Q8TF50 670 aaPredicted RBP24.52■■□□□ 1.52
MRPL55-230ENST00000489430 TAOK3Q9H2K8 898 aa24.52■■□□□ 1.52
MRPL55-230ENST00000489430 KDM2BQ8NHM5 1336 aa24.52■■□□□ 1.52
MRPL55-230ENST00000489430 GOLGA2Q08379 1002 aa24.51■■□□□ 1.51
MRPL55-230ENST00000489430 GRIPAP1Q4V328 841 aa24.51■■□□□ 1.51
MRPL55-230ENST00000489430 CC2D2BQ6DHV5 1058 aa24.51■■□□□ 1.51
MRPL55-230ENST00000489430 RPGRQ92834 1020 aaKnown RBP24.51■■□□□ 1.51
MRPL55-230ENST00000489430 TSR2Q969E8 191 aaKnown RBP24.51■■□□□ 1.51
MRPL55-230ENST00000489430 CRAMP1Q96RY5 1269 aa24.51■■□□□ 1.51
MRPL55-230ENST00000489430 RTKN2Q8IZC4 609 aa24.5■■□□□ 1.51
MRPL55-230ENST00000489430 ISCA1Q9BUE6 129 aa24.5■■□□□ 1.51
MRPL55-230ENST00000489430 SH3TC1Q8TE82 1336 aa24.5■■□□□ 1.51
MRPL55-230ENST00000489430 PRELPP51888 382 aa24.49■■□□□ 1.51
MRPL55-230ENST00000489430 TSPYL6Q8N831 410 aa24.49■■□□□ 1.51
MRPL55-230ENST00000489430 RBM17Q96I25 401 aaKnown RBP24.49■■□□□ 1.51
MRPL55-230ENST00000489430 ZNF219Q9P2Y4 722 aaPredicted RBP24.49■■□□□ 1.51
MRPL55-230ENST00000489430 TRMT112Q9UI30 125 aaKnown RBP24.49■■□□□ 1.51
MRPL55-230ENST00000489430 ARFGEF2Q9Y6D5 1785 aa24.49■■□□□ 1.51
MRPL55-230ENST00000489430 DDX58O95786 925 aaKnown RBP24.48■■□□□ 1.51
MRPL55-230ENST00000489430 TWISTNBQ3B726 338 aaPredicted RBP24.48■■□□□ 1.51
MRPL55-230ENST00000489430 SLX4Q8IY92 1834 aa24.47■■□□□ 1.51
MRPL55-230ENST00000489430 KIF3CO14782 793 aa24.47■■□□□ 1.51
MRPL55-230ENST00000489430 RIC3Q7Z5B4 369 aa24.47■■□□□ 1.51
MRPL55-230ENST00000489430 STK31Q9BXU1 1019 aa24.47■■□□□ 1.51
MRPL55-230ENST00000489430 FANCIQ9NVI1 1328 aa24.46■■□□□ 1.51
MRPL55-230ENST00000489430 PHAXQ9H814 394 aaKnown RBP24.46■■□□□ 1.51
MRPL55-230ENST00000489430 TNRC6CQ9HCJ0 1690 aaKnown RBP24.46■■□□□ 1.51
MRPL55-230ENST00000489430 SBF1O95248 1867 aa24.45■■□□□ 1.51
MRPL55-230ENST00000489430 FKBP4Q02790 459 aaKnown RBP eCLIP24.45■■□□□ 1.5
MRPL55-230ENST00000489430 GLTPD2A6NH11 291 aa24.44■■□□□ 1.5
MRPL55-230ENST00000489430 MYH16Q9H6N6 1097 aa24.44■■□□□ 1.5
MRPL55-230ENST00000489430 FER1L6Q2WGJ9 1857 aa24.44■■□□□ 1.5
MRPL55-230ENST00000489430 ANKRD36CQ5JPF3 1778 aa24.44■■□□□ 1.5
MRPL55-230ENST00000489430 SENP3-EIF4A1A0A087X0R7 540 aa24.43■■□□□ 1.5
MRPL55-230ENST00000489430 HSP90B1P14625 803 aaKnown RBP24.43■■□□□ 1.5
MRPL55-230ENST00000489430 DPY19L2Q6NUT2 758 aa24.43■■□□□ 1.5
MRPL55-230ENST00000489430 C3orf67Q6ZVT6 689 aa24.43■■□□□ 1.5
MRPL55-230ENST00000489430 PSMD1Q99460 953 aa24.43■■□□□ 1.5
MRPL55-230ENST00000489430 SALL2Q9Y467 1007 aaPredicted RBP24.43■■□□□ 1.5
MRPL55-230ENST00000489430 CCER2I3L3R5 266 aa24.42■■□□□ 1.5
MRPL55-230ENST00000489430 CCDC191Q8NCU4 936 aa24.42■■□□□ 1.5
MRPL55-230ENST00000489430 ATP5J2-PTCD1G3V325 749 aa24.41■■□□□ 1.5
MRPL55-230ENST00000489430 BBOX1O75936 387 aa24.41■■□□□ 1.5
MRPL55-230ENST00000489430 TOMM70O94826 608 aa24.41■■□□□ 1.5
MRPL55-230ENST00000489430 METTL22Q9BUU2 404 aaPredicted RBP24.41■■□□□ 1.5
MRPL55-230ENST00000489430 TMX4Q9H1E5 349 aaPredicted RBP24.41■■□□□ 1.5
MRPL55-230ENST00000489430 NMRK2Q9NPI5 230 aa24.41■■□□□ 1.5
MRPL55-230ENST00000489430 SNED1Q8TER0 1413 aa24.41■■□□□ 1.5
MRPL55-230ENST00000489430 HCLS1P14317 486 aaPredicted RBP24.4■■□□□ 1.5
MRPL55-230ENST00000489430 KSR2Q6VAB6 950 aa24.4■■□□□ 1.5
MRPL55-230ENST00000489430 ZBTB38Q8NAP3 1195 aaPredicted RBP24.4■■□□□ 1.5
MRPL55-230ENST00000489430 ZNF521Q96K83 1311 aa24.39■■□□□ 1.5
MRPL55-230ENST00000489430 PPEF1O14829 653 aaPredicted RBP24.39■■□□□ 1.49
MRPL55-230ENST00000489430 VAMP4O75379 141 aa24.39■■□□□ 1.49
MRPL55-230ENST00000489430 SLC4A2P04920 1241 aa24.39■■□□□ 1.49
MRPL55-230ENST00000489430 SF3B3Q15393 1217 aaKnown RBP24.39■■□□□ 1.49
MRPL55-230ENST00000489430 DDX46Q7L014 1031 aaKnown RBP24.39■■□□□ 1.49
MRPL55-230ENST00000489430 TMC4Q7Z404 712 aa24.39■■□□□ 1.49
MRPL55-230ENST00000489430 SYNE4Q8N205 404 aa24.38■■□□□ 1.49
MRPL55-230ENST00000489430 FAM89AQ96GI7 184 aa24.38■■□□□ 1.49
MRPL55-230ENST00000489430 ATP6V0A2Q9Y487 856 aa24.38■■□□□ 1.49
MRPL55-230ENST00000489430 MYD88Q99836 296 aa24.37■■□□□ 1.49
MRPL55-230ENST00000489430 VPS33BQ9H267 617 aa24.37■■□□□ 1.49
MRPL55-230ENST00000489430 ABCC4O15439 1325 aa24.36■■□□□ 1.49
MRPL55-230ENST00000489430 PI4KAP2A4QPH2 592 aa24.36■■□□□ 1.49
MRPL55-230ENST00000489430 VEGFAP15692 232 aaPredicted RBP24.36■■□□□ 1.49
MRPL55-230ENST00000489430 EXOSC9Q06265 439 aaKnown RBP24.36■■□□□ 1.49
MRPL55-230ENST00000489430 GRAPQ13588 217 aa24.36■■□□□ 1.49
MRPL55-230ENST00000489430 OLFM4Q6UX06 510 aa24.36■■□□□ 1.49
MRPL55-230ENST00000489430 C16orf71Q8IYS4 520 aaPredicted RBP24.36■■□□□ 1.49
MRPL55-230ENST00000489430 PI4KAP1Q8N8J0 262 aa24.36■■□□□ 1.49
MRPL55-230ENST00000489430 RBM46Q8TBY0 533 aaKnown RBP24.36■■□□□ 1.49
MRPL55-230ENST00000489430 GRAPLQ8TC17 118 aaPredicted RBP24.36■■□□□ 1.49
MRPL55-230ENST00000489430 SPINK5Q9NQ38 1064 aaPredicted RBP24.36■■□□□ 1.49
MRPL55-230ENST00000489430 CWC25Q9NXE8 425 aaPredicted RBP24.36■■□□□ 1.49
MRPL55-230ENST00000489430 MAP3K2Q9Y2U5 619 aa24.36■■□□□ 1.49
MRPL55-230ENST00000489430 IRS4O14654 1257 aaPredicted RBP24.35■■□□□ 1.49
MRPL55-230ENST00000489430 PCCAP05165 728 aaPredicted RBP24.35■■□□□ 1.49
MRPL55-230ENST00000489430 IARSP41252 1262 aaKnown RBP24.35■■□□□ 1.49
MRPL55-230ENST00000489430 NEXNQ0ZGT2 675 aa24.35■■□□□ 1.49
MRPL55-230ENST00000489430 SP8Q8IXZ3 490 aa24.35■■□□□ 1.49
MRPL55-230ENST00000489430 RRAGCQ9HB90 399 aa24.35■■□□□ 1.49
MRPL55-230ENST00000489430 ZNF277Q9NRM2 450 aaPredicted RBP24.35■■□□□ 1.49
MRPL55-230ENST00000489430 CACNA1SQ13698 1873 aa24.33■■□□□ 1.49
MRPL55-230ENST00000489430 FLIIQ13045 1269 aa24.33■■□□□ 1.49
MRPL55-230ENST00000489430 TIAM2Q8IVF5 1701 aa24.32■■□□□ 1.48
MRPL55-230ENST00000489430 JDP2Q8WYK2 163 aa24.32■■□□□ 1.48
MRPL55-230ENST00000489430 DICER1Q9UPY3 1922 aaKnown RBP24.31■■□□□ 1.48
MRPL55-230ENST00000489430 FZD9O00144 591 aa24.31■■□□□ 1.48
MRPL55-230ENST00000489430 FSTL1Q12841 308 aa24.31■■□□□ 1.48
MRPL55-230ENST00000489430 SUPT20HQ8NEM7 779 aa24.31■■□□□ 1.48
MRPL55-230ENST00000489430 RTFDC1Q9BY42 306 aaPredicted RBP24.31■■□□□ 1.48
MRPL55-230ENST00000489430 CDHR2Q9BYE9 1310 aa24.31■■□□□ 1.48
MRPL55-230ENST00000489430 E9PSI1 815 aa24.3■■□□□ 1.48
MRPL55-230ENST00000489430 TCERG1O14776 1098 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms