RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 NME9Q86XW9 330 aa11.02□□□□□ -0.65
EXOSC3-206ENST00000489414 DPF3Q92784 378 aa11.02□□□□□ -0.65
EXOSC3-206ENST00000489414 BRIP1Q9BX63 1249 aa11.02□□□□□ -0.65
EXOSC3-206ENST00000489414 GBA2Q9HCG7 927 aaPredicted RBP11.02□□□□□ -0.65
EXOSC3-206ENST00000489414 TRIM17Q9Y577 477 aa11.02□□□□□ -0.65
EXOSC3-206ENST00000489414 EIF6P56537 245 aaKnown RBP11.01□□□□□ -0.65
EXOSC3-206ENST00000489414 STYK1Q6J9G0 422 aa11.01□□□□□ -0.65
EXOSC3-206ENST00000489414 ZC3H15Q8WU90 426 aaKnown RBP11.01□□□□□ -0.65
EXOSC3-206ENST00000489414 ATXN8OSP0DMR3 200 aa11□□□□□ -0.65
EXOSC3-206ENST00000489414 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11□□□□□ -0.65
EXOSC3-206ENST00000489414 ZNF333Q96JL9 665 aa11□□□□□ -0.65
EXOSC3-206ENST00000489414 CFHR5Q9BXR6 569 aa11□□□□□ -0.65
EXOSC3-206ENST00000489414 GPRC5DQ9NZD1 345 aa11□□□□□ -0.65
EXOSC3-206ENST00000489414 NCOR1O75376 2440 aa11□□□□□ -0.65
EXOSC3-206ENST00000489414 MRC1P22897 1456 aa11□□□□□ -0.65
EXOSC3-206ENST00000489414 MUC6Q6W4X9 2439 aa10.99□□□□□ -0.65
EXOSC3-206ENST00000489414 ZBTB7BO15156 539 aaPredicted RBP10.99□□□□□ -0.65
EXOSC3-206ENST00000489414 DLK2Q6UY11 383 aa10.99□□□□□ -0.65
EXOSC3-206ENST00000489414 RASAL3Q86YV0 1011 aa10.99□□□□□ -0.65
EXOSC3-206ENST00000489414 C2orf69Q8N8R5 385 aa10.99□□□□□ -0.65
EXOSC3-206ENST00000489414 JDP2Q8WYK2 163 aa10.99□□□□□ -0.65
EXOSC3-206ENST00000489414 BCL2L12Q9HB09 334 aa10.99□□□□□ -0.65
EXOSC3-206ENST00000489414 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
EXOSC3-206ENST00000489414 TJP1Q07157 1748 aa10.98□□□□□ -0.65
EXOSC3-206ENST00000489414 SRGNP10124 158 aa10.98□□□□□ -0.65
EXOSC3-206ENST00000489414 ALYREFQ86V81 257 aaKnown RBP10.98□□□□□ -0.65
EXOSC3-206ENST00000489414 GUCD1Q96NT3 240 aa10.98□□□□□ -0.65
EXOSC3-206ENST00000489414 CACNA1GO43497 2377 aa10.97□□□□□ -0.65
EXOSC3-206ENST00000489414 LRIT3Q3SXY7 679 aa10.97□□□□□ -0.65
EXOSC3-206ENST00000489414 RTKN2Q8IZC4 609 aa10.97□□□□□ -0.65
EXOSC3-206ENST00000489414 P2RX7Q99572 595 aaKnown RBP10.97□□□□□ -0.65
EXOSC3-206ENST00000489414 R3HDMLQ9H3Y0 253 aa10.97□□□□□ -0.65
EXOSC3-206ENST00000489414 NARFQ9UHQ1 456 aa10.97□□□□□ -0.65
EXOSC3-206ENST00000489414 SBNO2Q9Y2G9 1366 aa10.97□□□□□ -0.65
EXOSC3-206ENST00000489414 SNED1Q8TER0 1413 aa10.96□□□□□ -0.65
EXOSC3-206ENST00000489414 CENPJQ9HC77 1338 aaPredicted RBP10.96□□□□□ -0.65
EXOSC3-206ENST00000489414 WTIPA6NIX2 430 aaPredicted RBP10.96□□□□□ -0.65
EXOSC3-206ENST00000489414 HIRAP54198 1017 aaPredicted RBP10.96□□□□□ -0.65
EXOSC3-206ENST00000489414 INTS5Q6P9B9 1019 aaKnown RBP10.96□□□□□ -0.65
EXOSC3-206ENST00000489414 OLFM4Q6UX06 510 aa10.96□□□□□ -0.65
EXOSC3-206ENST00000489414 USP48Q86UV5 1035 aa10.96□□□□□ -0.65
EXOSC3-206ENST00000489414 MASTLQ96GX5 879 aa10.96□□□□□ -0.65
EXOSC3-206ENST00000489414 NR2E3Q9Y5X4 410 aa10.96□□□□□ -0.65
EXOSC3-206ENST00000489414 SOS1Q07889 1333 aaPredicted RBP10.95□□□□□ -0.66
EXOSC3-206ENST00000489414 PRKAR2AP13861 404 aaKnown RBP10.95□□□□□ -0.66
EXOSC3-206ENST00000489414 PRR5LQ6MZQ0 368 aa10.95□□□□□ -0.66
EXOSC3-206ENST00000489414 STAP2Q9UGK3 403 aa10.95□□□□□ -0.66
EXOSC3-206ENST00000489414 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
EXOSC3-206ENST00000489414 TM4SF4P48230 202 aa10.94□□□□□ -0.66
EXOSC3-206ENST00000489414 SLC4A8Q2Y0W8 1093 aa10.94□□□□□ -0.66
EXOSC3-206ENST00000489414 BDP1A6H8Y1 2624 aa10.94□□□□□ -0.66
EXOSC3-206ENST00000489414 ZNF609O15014 1411 aa10.93□□□□□ -0.66
EXOSC3-206ENST00000489414 RTL1A6NKG5 1358 aa10.93□□□□□ -0.66
EXOSC3-206ENST00000489414 AMPHP49418 695 aa10.93□□□□□ -0.66
EXOSC3-206ENST00000489414 PSMD1Q99460 953 aa10.93□□□□□ -0.66
EXOSC3-206ENST00000489414 HCN4Q9Y3Q4 1203 aa10.93□□□□□ -0.66
EXOSC3-206ENST00000489414 POLR2AP24928 1970 aaKnown RBP10.93□□□□□ -0.66
EXOSC3-206ENST00000489414 KDM3BQ7LBC6 1761 aa10.93□□□□□ -0.66
EXOSC3-206ENST00000489414 BMP8BP34820 402 aa10.92□□□□□ -0.66
EXOSC3-206ENST00000489414 TRPM4Q8TD43 1214 aa10.92□□□□□ -0.66
EXOSC3-206ENST00000489414 DCAF11Q8TEB1 546 aa10.92□□□□□ -0.66
EXOSC3-206ENST00000489414 MPHOSPH9Q99550 1183 aa10.92□□□□□ -0.66
EXOSC3-206ENST00000489414 HTATIP2Q9BUP3 242 aa10.92□□□□□ -0.66
EXOSC3-206ENST00000489414 COL15A1P39059 1388 aa10.91□□□□□ -0.66
EXOSC3-206ENST00000489414 BCAMP50895 628 aa10.91□□□□□ -0.66
EXOSC3-206ENST00000489414 TJAP1Q5JTD0 557 aa10.91□□□□□ -0.66
EXOSC3-206ENST00000489414 UBE2Q1Q7Z7E8 422 aa10.91□□□□□ -0.66
EXOSC3-206ENST00000489414 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
EXOSC3-206ENST00000489414 SHISA4Q96DD7 197 aa10.91□□□□□ -0.66
EXOSC3-206ENST00000489414 STAC3Q96MF2 364 aa10.91□□□□□ -0.66
EXOSC3-206ENST00000489414 MAFAQ8NHW3 353 aaPredicted RBP10.9□□□□□ -0.66
EXOSC3-206ENST00000489414 GDF15Q99988 308 aa10.9□□□□□ -0.66
EXOSC3-206ENST00000489414 EVC2Q86UK5 1308 aa10.89□□□□□ -0.67
EXOSC3-206ENST00000489414 CDHR2Q9BYE9 1310 aa10.89□□□□□ -0.67
EXOSC3-206ENST00000489414 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
EXOSC3-206ENST00000489414 FAM109BQ6ICB4 259 aaPredicted RBP10.89□□□□□ -0.67
EXOSC3-206ENST00000489414 KRT26Q7Z3Y9 468 aa10.89□□□□□ -0.67
EXOSC3-206ENST00000489414 SPG7Q9UQ90 795 aa10.89□□□□□ -0.67
EXOSC3-206ENST00000489414 IRS2Q9Y4H2 1338 aa10.88□□□□□ -0.67
EXOSC3-206ENST00000489414 POTEB2H3BUK9 544 aa10.88□□□□□ -0.67
EXOSC3-206ENST00000489414 PHKG2P15735 406 aa10.88□□□□□ -0.67
EXOSC3-206ENST00000489414 GMPSP49915 693 aaPredicted RBP10.88□□□□□ -0.67
EXOSC3-206ENST00000489414 NBPF11Q86T75 865 aa10.88□□□□□ -0.67
EXOSC3-206ENST00000489414 A0A1W2PP64 1363 aa10.88□□□□□ -0.67
EXOSC3-206ENST00000489414 TONSLQ96HA7 1378 aa10.88□□□□□ -0.67
EXOSC3-206ENST00000489414 NCAPD2Q15021 1401 aa10.87□□□□□ -0.67
EXOSC3-206ENST00000489414 BAHCC1Q9P281 2608 aa10.87□□□□□ -0.67
EXOSC3-206ENST00000489414 ADM5C9JUS6 153 aa10.87□□□□□ -0.67
EXOSC3-206ENST00000489414 PTCD1O75127 700 aaKnown RBP10.87□□□□□ -0.67
EXOSC3-206ENST00000489414 FBLN1P23142 703 aa10.87□□□□□ -0.67
EXOSC3-206ENST00000489414 SLC9C1Q4G0N8 1177 aa10.87□□□□□ -0.67
EXOSC3-206ENST00000489414 TBC1D9BQ66K14 1250 aa10.87□□□□□ -0.67
EXOSC3-206ENST00000489414 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
EXOSC3-206ENST00000489414 ERO1AQ96HE7 468 aa10.87□□□□□ -0.67
EXOSC3-206ENST00000489414 EDC4Q6P2E9 1401 aaKnown RBP10.86□□□□□ -0.67
EXOSC3-206ENST00000489414 ERVV-2B6SEH9 535 aa10.86□□□□□ -0.67
EXOSC3-206ENST00000489414 MRE11P49959 708 aa10.86□□□□□ -0.67
EXOSC3-206ENST00000489414 IFNL2Q8IZJ0 200 aa10.86□□□□□ -0.67
EXOSC3-206ENST00000489414 LARGE2Q8N3Y3 721 aa10.86□□□□□ -0.67
EXOSC3-206ENST00000489414 C1QTNF1Q9BXJ1 281 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms