RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 TCHHQ07283 1943 aa23.56■■□□□ 1.36
SYNGR1-207ENST00000489206 CASTP20810 708 aaKnown RBP23.55■■□□□ 1.36
SYNGR1-207ENST00000489206 RUFY3Q7L099 469 aa23.55■■□□□ 1.36
SYNGR1-207ENST00000489206 SYAP1Q96A49 352 aaPredicted RBP23.55■■□□□ 1.36
SYNGR1-207ENST00000489206 COPRSQ9NQ92 184 aa23.55■■□□□ 1.36
SYNGR1-207ENST00000489206 SPATA31A3Q5VYP0 1347 aa23.55■■□□□ 1.36
SYNGR1-207ENST00000489206 PTH1RQ03431 593 aa23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 ZSWIM6Q9HCJ5 1215 aa23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 SH2B1Q9NRF2 756 aaPredicted RBP23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 TMEM63CQ9P1W3 806 aa23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 UBR2Q8IWV8 1755 aa23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 ERBB4Q15303 1308 aa23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 CYP27B1O15528 508 aa23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 ZKSCAN1P17029 563 aaPredicted RBP23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 NECTIN1Q15223 517 aa23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 TMEM87AQ8NBN3 555 aa23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 CYP46A1Q9Y6A2 500 aa23.54■■□□□ 1.36
SYNGR1-207ENST00000489206 RBM27Q9P2N5 1060 aaKnown RBP23.53■■□□□ 1.36
SYNGR1-207ENST00000489206 PRPF40BQ6NWY9 871 aaKnown RBP23.52■■□□□ 1.36
SYNGR1-207ENST00000489206 CCDC8Q9H0W5 538 aaPredicted RBP23.52■■□□□ 1.36
SYNGR1-207ENST00000489206 RFX7Q2KHR2 1363 aa23.52■■□□□ 1.36
SYNGR1-207ENST00000489206 RABL6Q3YEC7 729 aaPredicted RBP23.52■■□□□ 1.36
SYNGR1-207ENST00000489206 MAP4K1Q92918 833 aa23.52■■□□□ 1.36
SYNGR1-207ENST00000489206 JAKMIP1Q96N16 626 aaKnown RBP23.52■■□□□ 1.36
SYNGR1-207ENST00000489206 PDRG1Q9NUG6 133 aa23.52■■□□□ 1.36
SYNGR1-207ENST00000489206 PRIM1P49642 420 aaKnown RBP23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 DDX17Q92841 729 aaKnown RBP23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 CHAMP1Q96JM3 812 aa23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 SMC3Q9UQE7 1217 aa23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 USP16Q9Y5T5 823 aa23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 JCADQ9P266 1359 aa23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 MED23Q9ULK4 1368 aa23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 ZSCAN22P10073 491 aaPredicted RBP23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 CABP4P57796 275 aa23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 NMIQ13287 307 aaPredicted RBP23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 RBSNQ9H1K0 784 aa23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 ATP6V1DQ9Y5K8 247 aa23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 RBM8AQ9Y5S9 174 aaKnown RBP23.51■■□□□ 1.35
SYNGR1-207ENST00000489206 NUP188Q5SRE5 1749 aa23.5■■□□□ 1.35
SYNGR1-207ENST00000489206 PSMA5P28066 241 aa23.5■■□□□ 1.35
SYNGR1-207ENST00000489206 EPHA10Q5JZY3 1008 aa23.5■■□□□ 1.35
SYNGR1-207ENST00000489206 SIL1Q9H173 461 aa23.5■■□□□ 1.35
SYNGR1-207ENST00000489206 NSFL1CQ9UNZ2 370 aaKnown RBP23.5■■□□□ 1.35
SYNGR1-207ENST00000489206 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.5■■□□□ 1.35
SYNGR1-207ENST00000489206 PAPPAQ13219 1627 aa23.5■■□□□ 1.35
SYNGR1-207ENST00000489206 RFX5P48382 616 aaPredicted RBP23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 CREB3L3Q68CJ9 461 aa23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 FSD1Q9BTV5 496 aa23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 TLR7Q9NYK1 1049 aaKnown RBP23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 STX6O43752 255 aa23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 PHF14O94880 888 aa23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 PDIA4P13667 645 aaKnown RBP23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 CHRNA2Q15822 529 aa23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 HS1BP3Q53T59 392 aa23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 RNF20Q5VTR2 975 aa23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 PLBD2Q8NHP8 589 aa23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 CABLES1Q8TDN4 633 aa23.49■■□□□ 1.35
SYNGR1-207ENST00000489206 FAM227BQ96M60 508 aa23.48■■□□□ 1.35
SYNGR1-207ENST00000489206 SYCE3A1L190 88 aa23.47■■□□□ 1.35
SYNGR1-207ENST00000489206 ATP5JP18859 108 aa23.47■■□□□ 1.35
SYNGR1-207ENST00000489206 KCNJ4P48050 445 aa23.47■■□□□ 1.35
SYNGR1-207ENST00000489206 ADCK5Q3MIX3 580 aa23.47■■□□□ 1.35
SYNGR1-207ENST00000489206 SYT1P21579 422 aa23.47■■□□□ 1.35
SYNGR1-207ENST00000489206 ILDR1Q86SU0 546 aaPredicted RBP23.47■■□□□ 1.35
SYNGR1-207ENST00000489206 BOLA2Q9H3K6 86 aa23.47■■□□□ 1.35
SYNGR1-207ENST00000489206 PTPN12Q05209 780 aaKnown RBP23.46■■□□□ 1.35
SYNGR1-207ENST00000489206 USP48Q86UV5 1035 aa23.46■■□□□ 1.35
SYNGR1-207ENST00000489206 PDLIM2Q96JY6 352 aa23.46■■□□□ 1.35
SYNGR1-207ENST00000489206 ALDH8A1Q9H2A2 487 aaPredicted RBP23.46■■□□□ 1.35
SYNGR1-207ENST00000489206 HMG20BQ9P0W2 317 aa23.46■■□□□ 1.35
SYNGR1-207ENST00000489206 UBAP1LF5GYI3 381 aa23.45■■□□□ 1.35
SYNGR1-207ENST00000489206 F13A1P00488 732 aa23.45■■□□□ 1.35
SYNGR1-207ENST00000489206 KLHL34Q8N239 644 aa23.45■■□□□ 1.35
SYNGR1-207ENST00000489206 PCDH11XQ9BZA7 1347 aa23.45■■□□□ 1.34
SYNGR1-207ENST00000489206 PCDH11YQ9BZA8 1340 aa23.45■■□□□ 1.34
SYNGR1-207ENST00000489206 TJP1Q07157 1748 aa23.45■■□□□ 1.34
SYNGR1-207ENST00000489206 A0A0D9SFI3 127 aa23.45■■□□□ 1.34
SYNGR1-207ENST00000489206 SLC27A2O14975 620 aa23.45■■□□□ 1.34
SYNGR1-207ENST00000489206 ANKRD1Q15327 319 aa23.45■■□□□ 1.34
SYNGR1-207ENST00000489206 TNNI3KQ59H18 835 aa23.45■■□□□ 1.34
SYNGR1-207ENST00000489206 KLHDC4Q8TBB5 520 aa23.45■■□□□ 1.34
SYNGR1-207ENST00000489206 FPGT-TNNI3KV9GXZ4 949 aa23.45■■□□□ 1.34
SYNGR1-207ENST00000489206 CPA1P15085 419 aa23.44■■□□□ 1.34
SYNGR1-207ENST00000489206 UBE3BQ7Z3V4 1068 aa23.44■■□□□ 1.34
SYNGR1-207ENST00000489206 LARGE1O95461 756 aa23.43■■□□□ 1.34
SYNGR1-207ENST00000489206 CASP7P55210 303 aa23.43■■□□□ 1.34
SYNGR1-207ENST00000489206 CSPP1Q1MSJ5 1256 aa23.43■■□□□ 1.34
SYNGR1-207ENST00000489206 TSGA10IPQ3SY00 556 aa23.43■■□□□ 1.34
SYNGR1-207ENST00000489206 CCDC83Q8IWF9 413 aa23.43■■□□□ 1.34
SYNGR1-207ENST00000489206 WDR17Q8IZU2 1322 aa23.43■■□□□ 1.34
SYNGR1-207ENST00000489206 A0A087WZG4 1122 aa23.43■■□□□ 1.34
SYNGR1-207ENST00000489206 ZSCAN30Q86W11 494 aa23.43■■□□□ 1.34
SYNGR1-207ENST00000489206 GJB2P29033 226 aa23.42■■□□□ 1.34
SYNGR1-207ENST00000489206 FBXO41Q8TF61 875 aa23.42■■□□□ 1.34
SYNGR1-207ENST00000489206 TSPY26PQ9H489 355 aa23.42■■□□□ 1.34
SYNGR1-207ENST00000489206 DBNLQ9UJU6 430 aaKnown RBP23.42■■□□□ 1.34
SYNGR1-207ENST00000489206 ABCA3Q99758 1704 aa23.42■■□□□ 1.34
SYNGR1-207ENST00000489206 ERVV-2B6SEH9 535 aa23.41■■□□□ 1.34
SYNGR1-207ENST00000489206 PIP4K2BP78356 416 aa23.41■■□□□ 1.34
SYNGR1-207ENST00000489206 TICAM2Q86XR7 235 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms