RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 HOXA10P31260 410 aaPredicted RBP16.33■□□□□ 0.2
SRRM1-216ENST00000489130 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
SRRM1-216ENST00000489130 DUSP27Q5VZP5 1158 aa16.33■□□□□ 0.2
SRRM1-216ENST00000489130 C16orf71Q8IYS4 520 aaPredicted RBP16.33■□□□□ 0.2
SRRM1-216ENST00000489130 DBF4Q9UBU7 674 aaPredicted RBP16.33■□□□□ 0.2
SRRM1-216ENST00000489130 RNF123Q5XPI4 1314 aa16.33■□□□□ 0.2
SRRM1-216ENST00000489130 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
SRRM1-216ENST00000489130 DICER1Q9UPY3 1922 aaKnown RBP16.33■□□□□ 0.2
SRRM1-216ENST00000489130 CEP350Q5VT06 3117 aa16.32■□□□□ 0.2
SRRM1-216ENST00000489130 GNAI1P63096 354 aa16.32■□□□□ 0.2
SRRM1-216ENST00000489130 ANKRD36CQ5JPF3 1778 aa16.32■□□□□ 0.2
SRRM1-216ENST00000489130 SNED1Q8TER0 1413 aa16.32■□□□□ 0.2
SRRM1-216ENST00000489130 UTP14AQ9BVJ6 771 aaKnown RBP16.32■□□□□ 0.2
SRRM1-216ENST00000489130 FKBP4Q02790 459 aaKnown RBP eCLIP16.31■□□□□ 0.2
SRRM1-216ENST00000489130 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
SRRM1-216ENST00000489130 SLC10A5Q5PT55 438 aa16.31■□□□□ 0.2
SRRM1-216ENST00000489130 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
SRRM1-216ENST00000489130 OLFM4Q6UX06 510 aa16.31■□□□□ 0.2
SRRM1-216ENST00000489130 NLRP10Q86W26 655 aa16.31■□□□□ 0.2
SRRM1-216ENST00000489130 RTKN2Q8IZC4 609 aa16.31■□□□□ 0.2
SRRM1-216ENST00000489130 RPGRQ92834 1020 aaKnown RBP16.31■□□□□ 0.2
SRRM1-216ENST00000489130 VEGFAP15692 232 aaPredicted RBP16.3■□□□□ 0.2
SRRM1-216ENST00000489130 FSTL1Q12841 308 aa16.3■□□□□ 0.2
SRRM1-216ENST00000489130 C3orf67Q6ZVT6 689 aa16.3■□□□□ 0.2
SRRM1-216ENST00000489130 PLBD2Q8NHP8 589 aa16.3■□□□□ 0.2
SRRM1-216ENST00000489130 CRAMP1Q96RY5 1269 aa16.3■□□□□ 0.2
SRRM1-216ENST00000489130 HYPKQ9NX55 129 aa16.3■□□□□ 0.2
SRRM1-216ENST00000489130 WDR90Q96KV7 1748 aa16.3■□□□□ 0.2
SRRM1-216ENST00000489130 ANP32CO43423 234 aa16.29■□□□□ 0.2
SRRM1-216ENST00000489130 CCDC27Q2M243 656 aa16.29■□□□□ 0.2
SRRM1-216ENST00000489130 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
SRRM1-216ENST00000489130 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
SRRM1-216ENST00000489130 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
SRRM1-216ENST00000489130 POTECB2RU33 542 aa16.28■□□□□ 0.2
SRRM1-216ENST00000489130 APLP1P51693 650 aa16.28■□□□□ 0.2
SRRM1-216ENST00000489130 ANKRD13DQ6ZTN6 518 aa16.28■□□□□ 0.2
SRRM1-216ENST00000489130 PSMD1Q99460 953 aa16.28■□□□□ 0.2
SRRM1-216ENST00000489130 ZNF277Q9NRM2 450 aaPredicted RBP16.28■□□□□ 0.2
SRRM1-216ENST00000489130 GRIPAP1Q4V328 841 aa16.27■□□□□ 0.2
SRRM1-216ENST00000489130 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
SRRM1-216ENST00000489130 MRS2Q9HD23 443 aa16.27■□□□□ 0.2
SRRM1-216ENST00000489130 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
SRRM1-216ENST00000489130 SH3TC1Q8TE82 1336 aa16.26■□□□□ 0.19
SRRM1-216ENST00000489130 PPEF1O14829 653 aaPredicted RBP16.26■□□□□ 0.19
SRRM1-216ENST00000489130 IARSP41252 1262 aaKnown RBP16.26■□□□□ 0.19
SRRM1-216ENST00000489130 SYNE4Q8N205 404 aa16.26■□□□□ 0.19
SRRM1-216ENST00000489130 C8orf58Q8NAV2 365 aa16.26■□□□□ 0.19
SRRM1-216ENST00000489130 SMC1BQ8NDV3 1235 aa16.26■□□□□ 0.19
SRRM1-216ENST00000489130 ISCA1Q9BUE6 129 aa16.26■□□□□ 0.19
SRRM1-216ENST00000489130 ELL2O00472 640 aaPredicted RBP16.25■□□□□ 0.19
SRRM1-216ENST00000489130 DDNO94850 711 aaPredicted RBP16.25■□□□□ 0.19
SRRM1-216ENST00000489130 HCLS1P14317 486 aaPredicted RBP16.25■□□□□ 0.19
SRRM1-216ENST00000489130 WWC1Q8IX03 1113 aa16.25■□□□□ 0.19
SRRM1-216ENST00000489130 ABCC4O15439 1325 aa16.24■□□□□ 0.19
SRRM1-216ENST00000489130 TRIM28Q13263 835 aaKnown RBP16.24■□□□□ 0.19
SRRM1-216ENST00000489130 L3MBTL3Q96JM7 780 aaPredicted RBP16.24■□□□□ 0.19
SRRM1-216ENST00000489130 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
SRRM1-216ENST00000489130 LAMB2P55268 1798 aa16.23■□□□□ 0.19
SRRM1-216ENST00000489130 FZD9O00144 591 aa16.23■□□□□ 0.19
SRRM1-216ENST00000489130 SLC51AQ86UW1 340 aa16.23■□□□□ 0.19
SRRM1-216ENST00000489130 PHAXQ9H814 394 aaKnown RBP16.23■□□□□ 0.19
SRRM1-216ENST00000489130 ATP6V0A2Q9Y487 856 aa16.23■□□□□ 0.19
SRRM1-216ENST00000489130 IL16Q14005 1332 aa16.22■□□□□ 0.19
SRRM1-216ENST00000489130 ZNF541Q9H0D2 1346 aa16.22■□□□□ 0.19
SRRM1-216ENST00000489130 ATP5J2-PTCD1G3V325 749 aa16.22■□□□□ 0.19
SRRM1-216ENST00000489130 GOLGA2Q08379 1002 aa16.22■□□□□ 0.19
SRRM1-216ENST00000489130 CCDC30Q5VVM6 783 aa16.22■□□□□ 0.19
SRRM1-216ENST00000489130 RIC3Q7Z5B4 369 aa16.22■□□□□ 0.19
SRRM1-216ENST00000489130 TSPYL6Q8N831 410 aa16.22■□□□□ 0.19
SRRM1-216ENST00000489130 TSR2Q969E8 191 aaKnown RBP16.22■□□□□ 0.19
SRRM1-216ENST00000489130 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
SRRM1-216ENST00000489130 BBOX1O75936 387 aa16.21■□□□□ 0.19
SRRM1-216ENST00000489130 DDX60Q8IY21 1712 aaKnown RBP16.21■□□□□ 0.19
SRRM1-216ENST00000489130 COL4A5P29400 1685 aa16.21■□□□□ 0.18
SRRM1-216ENST00000489130 TCERG1O14776 1098 aaKnown RBP16.2■□□□□ 0.18
SRRM1-216ENST00000489130 DDX46Q7L014 1031 aaKnown RBP16.2■□□□□ 0.18
SRRM1-216ENST00000489130 DNAJC5GQ8N7S2 189 aa16.2■□□□□ 0.18
SRRM1-216ENST00000489130 JDP2Q8WYK2 163 aa16.2■□□□□ 0.18
SRRM1-216ENST00000489130 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
SRRM1-216ENST00000489130 FAM89AQ96GI7 184 aa16.2■□□□□ 0.18
SRRM1-216ENST00000489130 TMX4Q9H1E5 349 aaPredicted RBP16.2■□□□□ 0.18
SRRM1-216ENST00000489130 GRAPQ13588 217 aa16.19■□□□□ 0.18
SRRM1-216ENST00000489130 SF3B3Q15393 1217 aaKnown RBP16.19■□□□□ 0.18
SRRM1-216ENST00000489130 SP8Q8IXZ3 490 aa16.19■□□□□ 0.18
SRRM1-216ENST00000489130 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
SRRM1-216ENST00000489130 SCN4AP35499 1836 aa16.19■□□□□ 0.18
SRRM1-216ENST00000489130 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
SRRM1-216ENST00000489130 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
SRRM1-216ENST00000489130 GPC2Q8N158 579 aa16.18■□□□□ 0.18
SRRM1-216ENST00000489130 LARGE2Q8N3Y3 721 aa16.18■□□□□ 0.18
SRRM1-216ENST00000489130 ZBTB38Q8NAP3 1195 aaPredicted RBP16.18■□□□□ 0.18
SRRM1-216ENST00000489130 MYD88Q99836 296 aa16.18■□□□□ 0.18
SRRM1-216ENST00000489130 RTFDC1Q9BY42 306 aaPredicted RBP16.18■□□□□ 0.18
SRRM1-216ENST00000489130 VPS33BQ9H267 617 aa16.18■□□□□ 0.18
SRRM1-216ENST00000489130 TAF1DQ9H5J8 278 aaPredicted RBP16.18■□□□□ 0.18
SRRM1-216ENST00000489130 POTEIP0CG38 1075 aa16.17■□□□□ 0.18
SRRM1-216ENST00000489130 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
SRRM1-216ENST00000489130 HTRA3P83110 453 aa16.17■□□□□ 0.18
SRRM1-216ENST00000489130 TWISTNBQ3B726 338 aaPredicted RBP16.17■□□□□ 0.18
SRRM1-216ENST00000489130 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms