RNA–Protein interactions for RNA: ENST00000488979.6

SH3YL1-225, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-225ENST00000488979 KCNQ3O43525 872 aa13.2□□□□□ -0.3
SH3YL1-225ENST00000488979 HTATSF1O43719 755 aaKnown RBP13.2□□□□□ -0.3
SH3YL1-225ENST00000488979 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
SH3YL1-225ENST00000488979 PHACTR3Q96KR7 559 aa13.2□□□□□ -0.3
SH3YL1-225ENST00000488979 USP16Q9Y5T5 823 aa13.2□□□□□ -0.3
SH3YL1-225ENST00000488979 SCN7AQ01118 1682 aa13.2□□□□□ -0.3
SH3YL1-225ENST00000488979 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
SH3YL1-225ENST00000488979 MAP2K2P36507 400 aa13.19□□□□□ -0.3
SH3YL1-225ENST00000488979 TPTE2Q6XPS3 522 aa13.19□□□□□ -0.3
SH3YL1-225ENST00000488979 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
SH3YL1-225ENST00000488979 ZNF652Q9Y2D9 606 aa13.19□□□□□ -0.3
SH3YL1-225ENST00000488979 TLL2Q9Y6L7 1015 aa13.19□□□□□ -0.3
SH3YL1-225ENST00000488979 CASP8AP2Q9UKL3 1982 aa13.18□□□□□ -0.3
SH3YL1-225ENST00000488979 FAM177BA6PVY3 158 aa13.18□□□□□ -0.3
SH3YL1-225ENST00000488979 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
SH3YL1-225ENST00000488979 SCNN1DP51172 638 aa13.18□□□□□ -0.3
SH3YL1-225ENST00000488979 JDP2Q8WYK2 163 aa13.18□□□□□ -0.3
SH3YL1-225ENST00000488979 PRAMEF22A3QJZ6 481 aa13.17□□□□□ -0.3
SH3YL1-225ENST00000488979 EIF6P56537 245 aaKnown RBP13.17□□□□□ -0.3
SH3YL1-225ENST00000488979 PSMD1Q99460 953 aa13.17□□□□□ -0.3
SH3YL1-225ENST00000488979 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
SH3YL1-225ENST00000488979 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
SH3YL1-225ENST00000488979 LMOD1P29536 600 aaPredicted RBP13.16□□□□□ -0.3
SH3YL1-225ENST00000488979 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.3
SH3YL1-225ENST00000488979 DGKZQ13574 1117 aa13.16□□□□□ -0.3
SH3YL1-225ENST00000488979 USP50Q70EL3 339 aaPredicted RBP13.16□□□□□ -0.3
SH3YL1-225ENST00000488979 SAPCD2Q86UD0 394 aa13.16□□□□□ -0.3
SH3YL1-225ENST00000488979 NIP7Q9Y221 180 aaKnown RBP eCLIP13.16□□□□□ -0.3
SH3YL1-225ENST00000488979 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
SH3YL1-225ENST00000488979 PPP2R1AP30153 589 aa13.15□□□□□ -0.3
SH3YL1-225ENST00000488979 LTBP1Q14766 1721 aa13.15□□□□□ -0.3
SH3YL1-225ENST00000488979 COL4A5P29400 1685 aa13.15□□□□□ -0.31
SH3YL1-225ENST00000488979 CA12O43570 354 aa13.14□□□□□ -0.31
SH3YL1-225ENST00000488979 CNGB1Q14028 1251 aaPredicted RBP13.14□□□□□ -0.31
SH3YL1-225ENST00000488979 TAF7Q15545 349 aaPredicted RBP13.14□□□□□ -0.31
SH3YL1-225ENST00000488979 HLFQ16534 295 aa13.14□□□□□ -0.31
SH3YL1-225ENST00000488979 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
SH3YL1-225ENST00000488979 ZIC5Q96T25 663 aa13.14□□□□□ -0.31
SH3YL1-225ENST00000488979 PDE4DIPQ5VU43 2346 aa13.14□□□□□ -0.31
SH3YL1-225ENST00000488979 BCORQ6W2J9 1755 aa13.14□□□□□ -0.31
SH3YL1-225ENST00000488979 SNED1Q8TER0 1413 aa13.13□□□□□ -0.31
SH3YL1-225ENST00000488979 CELF2O95319 508 aaKnown RBP13.13□□□□□ -0.31
SH3YL1-225ENST00000488979 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
SH3YL1-225ENST00000488979 MCM10Q7L590 875 aa13.13□□□□□ -0.31
SH3YL1-225ENST00000488979 LARGE2Q8N3Y3 721 aa13.13□□□□□ -0.31
SH3YL1-225ENST00000488979 THSD7BQ9C0I4 1608 aa13.13□□□□□ -0.31
SH3YL1-225ENST00000488979 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
SH3YL1-225ENST00000488979 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
SH3YL1-225ENST00000488979 GTF2E1P29083 439 aaPredicted RBP13.12□□□□□ -0.31
SH3YL1-225ENST00000488979 BRPF1P55201 1214 aaPredicted RBP13.12□□□□□ -0.31
SH3YL1-225ENST00000488979 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
SH3YL1-225ENST00000488979 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
SH3YL1-225ENST00000488979 PNISRQ8TF01 805 aaKnown RBP13.12□□□□□ -0.31
SH3YL1-225ENST00000488979 GLIS2Q9BZE0 524 aaPredicted RBP13.12□□□□□ -0.31
SH3YL1-225ENST00000488979 TRPM7Q96QT4 1865 aa13.12□□□□□ -0.31
SH3YL1-225ENST00000488979 ERVV-1B6SEH8 477 aa13.11□□□□□ -0.31
SH3YL1-225ENST00000488979 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
SH3YL1-225ENST00000488979 NEFMP07197 916 aa13.11□□□□□ -0.31
SH3YL1-225ENST00000488979 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
SH3YL1-225ENST00000488979 CC2D2BQ6DHV5 1058 aa13.11□□□□□ -0.31
SH3YL1-225ENST00000488979 NUTM1Q86Y26 1132 aa13.11□□□□□ -0.31
SH3YL1-225ENST00000488979 HHIPL1Q96JK4 782 aa13.11□□□□□ -0.31
SH3YL1-225ENST00000488979 GPRC5DQ9NZD1 345 aa13.11□□□□□ -0.31
SH3YL1-225ENST00000488979 SOX10P56693 466 aa13.1□□□□□ -0.31
SH3YL1-225ENST00000488979 NYXQ9GZU5 481 aa13.1□□□□□ -0.31
SH3YL1-225ENST00000488979 ADARB2Q9NS39 739 aaKnown RBP13.1□□□□□ -0.31
SH3YL1-225ENST00000488979 PGAP2Q9UHJ9 254 aa13.1□□□□□ -0.31
SH3YL1-225ENST00000488979 HIRAP54198 1017 aaPredicted RBP13.09□□□□□ -0.31
SH3YL1-225ENST00000488979 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
SH3YL1-225ENST00000488979 DLK2Q6UY11 383 aa13.09□□□□□ -0.31
SH3YL1-225ENST00000488979 ZNF408Q9H9D4 720 aa13.09□□□□□ -0.31
SH3YL1-225ENST00000488979 HOXA10P31260 410 aaPredicted RBP13.08□□□□□ -0.32
SH3YL1-225ENST00000488979 CXCL9Q07325 125 aa13.08□□□□□ -0.32
SH3YL1-225ENST00000488979 GRIPAP1Q4V328 841 aa13.08□□□□□ -0.32
SH3YL1-225ENST00000488979 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
SH3YL1-225ENST00000488979 GMPSP49915 693 aaPredicted RBP13.07□□□□□ -0.32
SH3YL1-225ENST00000488979 AOC3Q16853 763 aa13.07□□□□□ -0.32
SH3YL1-225ENST00000488979 NIM1KQ8IY84 436 aa13.07□□□□□ -0.32
SH3YL1-225ENST00000488979 ABCC12Q96J65 1359 aa13.07□□□□□ -0.32
SH3YL1-225ENST00000488979 IBTKQ9P2D0 1353 aaPredicted RBP13.07□□□□□ -0.32
SH3YL1-225ENST00000488979 PPIP5K2O43314 1243 aa13.06□□□□□ -0.32
SH3YL1-225ENST00000488979 EIF4A1P60842 406 aaKnown RBP13.06□□□□□ -0.32
SH3YL1-225ENST00000488979 NOGQ13253 232 aa13.06□□□□□ -0.32
SH3YL1-225ENST00000488979 NGEFQ8N5V2 710 aa13.06□□□□□ -0.32
SH3YL1-225ENST00000488979 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
SH3YL1-225ENST00000488979 PLEKHF1Q96S99 279 aa13.06□□□□□ -0.32
SH3YL1-225ENST00000488979 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
SH3YL1-225ENST00000488979 MAP3K15Q6ZN16 1313 aa13.06□□□□□ -0.32
SH3YL1-225ENST00000488979 RIC1Q4ADV7 1423 aa13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 HUNKP57058 714 aa13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 NFE2L2Q16236 605 aa13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 KIF6Q6ZMV9 814 aa13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 CDC37L1Q7L3B6 337 aa13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 USP48Q86UV5 1035 aa13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 CRAMP1Q96RY5 1269 aa13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 MIS18AQ9NYP9 233 aa13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 ZNRF3Q9ULT6 936 aa13.05□□□□□ -0.32
SH3YL1-225ENST00000488979 SHTN1A0MZ66 631 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms