RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 PI4K2BQ8TCG2 481 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 GPT2Q8TD30 523 aa9.18□□□□□ -0.94
BEST3-205ENST00000488961 ZNF594Q96JF6 807 aaPredicted RBP9.18□□□□□ -0.94
BEST3-205ENST00000488961 SEC62Q99442 399 aaKnown RBP9.18□□□□□ -0.94
BEST3-205ENST00000488961 DNAJC2Q99543 621 aaKnown RBP9.18□□□□□ -0.94
BEST3-205ENST00000488961 SLIT1O75093 1534 aa9.17□□□□□ -0.94
BEST3-205ENST00000488961 IFIT2P09913 472 aaKnown RBP9.17□□□□□ -0.94
BEST3-205ENST00000488961 CASTP20810 708 aaKnown RBP9.17□□□□□ -0.94
BEST3-205ENST00000488961 EAF2Q96CJ1 260 aaPredicted RBP9.17□□□□□ -0.94
BEST3-205ENST00000488961 A1BGP04217 495 aa9.17□□□□□ -0.94
BEST3-205ENST00000488961 IGKV5-2P06315 115 aa9.17□□□□□ -0.94
BEST3-205ENST00000488961 SSH3Q8TE77 659 aa9.17□□□□□ -0.94
BEST3-205ENST00000488961 CYP27B1O15528 508 aa9.16□□□□□ -0.94
BEST3-205ENST00000488961 CCDC83Q8IWF9 413 aa9.16□□□□□ -0.94
BEST3-205ENST00000488961 SYNE4Q8N205 404 aa9.16□□□□□ -0.94
BEST3-205ENST00000488961 DBF4Q9UBU7 674 aaPredicted RBP9.16□□□□□ -0.94
BEST3-205ENST00000488961 SALL3Q9BXA9 1300 aa9.16□□□□□ -0.94
BEST3-205ENST00000488961 FAM208AQ9UK61 1670 aaKnown RBP9.16□□□□□ -0.94
BEST3-205ENST00000488961 A0A0G2JLW4 131 aa9.16□□□□□ -0.94
BEST3-205ENST00000488961 SASH1O94885 1247 aa9.16□□□□□ -0.94
BEST3-205ENST00000488961 ZNF790Q6PG37 636 aa9.16□□□□□ -0.94
BEST3-205ENST00000488961 KCNH5Q8NCM2 988 aa9.16□□□□□ -0.94
BEST3-205ENST00000488961 TRIM34Q9BYJ4 488 aa9.16□□□□□ -0.94
BEST3-205ENST00000488961 DIAPH3Q9NSV4 1193 aa9.16□□□□□ -0.94
BEST3-205ENST00000488961 PRIM1P49642 420 aaKnown RBP9.15□□□□□ -0.94
BEST3-205ENST00000488961 CSPP1Q1MSJ5 1256 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 TTLL7Q6ZT98 887 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 SYTL4Q96C24 671 aaPredicted RBP9.15□□□□□ -0.94
BEST3-205ENST00000488961 JAKMIP1Q96N16 626 aaKnown RBP9.15□□□□□ -0.94
BEST3-205ENST00000488961 NEUROD6Q96NK8 337 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 XRN1Q8IZH2 1706 aaKnown RBP9.15□□□□□ -0.94
BEST3-205ENST00000488961 NCOA3Q9Y6Q9 1424 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 TMEM94Q12767 1356 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 ERBB3P21860 1342 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 U2AF2P26368 475 aaKnown RBP eCLIP9.15□□□□□ -0.94
BEST3-205ENST00000488961 AK2P54819 239 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 PDIA6Q15084 440 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 TOM1L2Q6ZVM7 507 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 RAB11FIP4Q86YS3 637 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 LMBRD1Q9NUN5 540 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 ZKSCAN5Q9Y2L8 839 aa9.15□□□□□ -0.94
BEST3-205ENST00000488961 FIBPO43427 364 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 DDX46Q7L014 1031 aaKnown RBP9.14□□□□□ -0.95
BEST3-205ENST00000488961 CLASRPQ8N2M8 674 aaKnown RBP9.14□□□□□ -0.95
BEST3-205ENST00000488961 MYRIPQ8NFW9 859 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 TMEM63CQ9P1W3 806 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 SNX14Q9Y5W7 946 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 A0A0D9SFI3 127 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 NMIQ13287 307 aaPredicted RBP9.14□□□□□ -0.95
BEST3-205ENST00000488961 KSR2Q6VAB6 950 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 CHST3Q7LGC8 479 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 TTC5Q8N0Z6 440 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 KIF1BPQ96EK5 621 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 TRERF1Q96PN7 1200 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 SNRKQ9NRH2 765 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 CNPY2Q9Y2B0 182 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 NPHP4O75161 1426 aaPredicted RBP9.14□□□□□ -0.95
BEST3-205ENST00000488961 CEMIPQ8WUJ3 1361 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 VPS37CA5D8V6 355 aaPredicted RBP9.14□□□□□ -0.95
BEST3-205ENST00000488961 GRM8O00222 908 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 TATP17735 454 aaPredicted RBP9.14□□□□□ -0.95
BEST3-205ENST00000488961 TIMM10P62072 90 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 G3BP1Q13283 466 aaKnown RBP eCLIP9.14□□□□□ -0.95
BEST3-205ENST00000488961 ZSCAN23Q3MJ62 389 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 ZNF589Q86UQ0 364 aaPredicted RBP9.14□□□□□ -0.95
BEST3-205ENST00000488961 FSD1Q9BTV5 496 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 RBSNQ9H1K0 784 aa9.14□□□□□ -0.95
BEST3-205ENST00000488961 CHD2O14647 1828 aaKnown RBP9.13□□□□□ -0.95
BEST3-205ENST00000488961 GOLGA6L22H0YM25 854 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 CAPN2P17655 700 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 CABP4P57796 275 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 TFCP2Q12800 502 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 PRDM11Q9NQV5 511 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 PCNTO95613 3336 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 A0A087WZG4 1122 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 PHKG2P15735 406 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 STK11IPQ8N1F8 1099 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 DDX11Q96FC9 970 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 ADGRL3Q9HAR2 1447 aa9.13□□□□□ -0.95
BEST3-205ENST00000488961 MEGF6O75095 1541 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 NFAT5O94916 1531 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 HTATSF1O43719 755 aaKnown RBP9.12□□□□□ -0.95
BEST3-205ENST00000488961 MCCP23508 829 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 GPTP24298 496 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 SMIM5Q71RC9 77 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 RUFY3Q7L099 469 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 CNTROBQ8N137 903 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 C19orf44Q9H6X5 657 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 NPHP3Q7Z494 1330 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 CEBPZQ03701 1054 aaKnown RBP9.12□□□□□ -0.95
BEST3-205ENST00000488961 POLA2Q14181 598 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 DBNDD2Q9BQY9 259 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 OSBPL3Q9H4L5 887 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 SLC52A2Q9HAB3 445 aa9.12□□□□□ -0.95
BEST3-205ENST00000488961 SGSM2O43147 1006 aa9.11□□□□□ -0.95
BEST3-205ENST00000488961 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
BEST3-205ENST00000488961 HS1BP3Q53T59 392 aa9.11□□□□□ -0.95
BEST3-205ENST00000488961 ANKRD13DQ6ZTN6 518 aa9.11□□□□□ -0.95
BEST3-205ENST00000488961 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms