RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 CHMP4BQ9H444 224 aaKnown RBP16.37■□□□□ 0.21
CHD1L-208ENST00000488864 RTCBQ9Y3I0 505 aaKnown RBP16.37■□□□□ 0.21
CHD1L-208ENST00000488864 RPS6KA4O75676 772 aa16.36■□□□□ 0.21
CHD1L-208ENST00000488864 ALDH1L1O75891 902 aa16.36■□□□□ 0.21
CHD1L-208ENST00000488864 GIGYF2Q6Y7W6 1299 aaKnown RBP16.36■□□□□ 0.21
CHD1L-208ENST00000488864 LRRFIP2Q9Y608 721 aaKnown RBP16.36■□□□□ 0.21
CHD1L-208ENST00000488864 TCIRG1Q13488 830 aa16.36■□□□□ 0.21
CHD1L-208ENST00000488864 GCKRQ14397 625 aa16.36■□□□□ 0.21
CHD1L-208ENST00000488864 TAF1LQ8IZX4 1826 aa16.36■□□□□ 0.21
CHD1L-208ENST00000488864 CAMTA2O94983 1202 aa16.35■□□□□ 0.21
CHD1L-208ENST00000488864 GNAI3P08754 354 aa16.35■□□□□ 0.21
CHD1L-208ENST00000488864 EZH2Q15910 746 aaKnown RBP16.35■□□□□ 0.21
CHD1L-208ENST00000488864 DEFB132Q7Z7B7 95 aa16.35■□□□□ 0.21
CHD1L-208ENST00000488864 SRP68Q9UHB9 627 aaKnown RBP16.35■□□□□ 0.21
CHD1L-208ENST00000488864 GRM8O00222 908 aa16.35■□□□□ 0.21
CHD1L-208ENST00000488864 GNAI2P04899 355 aa16.35■□□□□ 0.21
CHD1L-208ENST00000488864 C4BP0C0L5 1744 aa16.35■□□□□ 0.21
CHD1L-208ENST00000488864 A0A087WZG4 1122 aa16.34■□□□□ 0.21
CHD1L-208ENST00000488864 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
CHD1L-208ENST00000488864 SIRT2Q8IXJ6 389 aa16.34■□□□□ 0.21
CHD1L-208ENST00000488864 ARHGEF1Q92888 912 aaKnown RBP16.34■□□□□ 0.21
CHD1L-208ENST00000488864 NUP188Q5SRE5 1749 aa16.34■□□□□ 0.21
CHD1L-208ENST00000488864 TNS1Q9HBL0 1735 aaKnown RBP16.34■□□□□ 0.21
CHD1L-208ENST00000488864 RREB1Q92766 1687 aa16.34■□□□□ 0.21
CHD1L-208ENST00000488864 MRE11P49959 708 aa16.34■□□□□ 0.21
CHD1L-208ENST00000488864 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.33■□□□□ 0.2
CHD1L-208ENST00000488864 FAM177BA6PVY3 158 aa16.33■□□□□ 0.2
CHD1L-208ENST00000488864 ERVV-1B6SEH8 477 aa16.33■□□□□ 0.2
CHD1L-208ENST00000488864 SF3B2Q13435 895 aaKnown RBP16.33■□□□□ 0.2
CHD1L-208ENST00000488864 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
CHD1L-208ENST00000488864 GRPEL1Q9HAV7 217 aa16.33■□□□□ 0.2
CHD1L-208ENST00000488864 CWC25Q9NXE8 425 aaPredicted RBP16.33■□□□□ 0.2
CHD1L-208ENST00000488864 ZNF827Q17R98 1081 aa16.32■□□□□ 0.2
CHD1L-208ENST00000488864 USPL1Q5W0Q7 1092 aa16.32■□□□□ 0.2
CHD1L-208ENST00000488864 CEP85Q6P2H3 762 aa16.32■□□□□ 0.2
CHD1L-208ENST00000488864 HSCBQ8IWL3 235 aa16.32■□□□□ 0.2
CHD1L-208ENST00000488864 N4BP2Q86UW6 1770 aaPredicted RBP16.32■□□□□ 0.2
CHD1L-208ENST00000488864 DDIT3P35638 169 aa16.31■□□□□ 0.2
CHD1L-208ENST00000488864 HDAC1Q13547 482 aaPredicted RBP16.31■□□□□ 0.2
CHD1L-208ENST00000488864 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
CHD1L-208ENST00000488864 SUCLG2Q96I99 432 aa16.31■□□□□ 0.2
CHD1L-208ENST00000488864 RFC4P35249 363 aa16.31■□□□□ 0.2
CHD1L-208ENST00000488864 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
CHD1L-208ENST00000488864 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
CHD1L-208ENST00000488864 CCDC191Q8NCU4 936 aa16.31■□□□□ 0.2
CHD1L-208ENST00000488864 CAMKK2Q96RR4 588 aa16.31■□□□□ 0.2
CHD1L-208ENST00000488864 TFCP2L1Q9NZI6 479 aa16.31■□□□□ 0.2
CHD1L-208ENST00000488864 UBN2Q6ZU65 1347 aa16.31■□□□□ 0.2
CHD1L-208ENST00000488864 AFDNP55196 1824 aaKnown RBP16.31■□□□□ 0.2
CHD1L-208ENST00000488864 ZPR1O75312 459 aa16.3■□□□□ 0.2
CHD1L-208ENST00000488864 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
CHD1L-208ENST00000488864 FAM89AQ96GI7 184 aa16.3■□□□□ 0.2
CHD1L-208ENST00000488864 PNMA6EA0A0J9YXQ4 647 aa16.3■□□□□ 0.2
CHD1L-208ENST00000488864 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
CHD1L-208ENST00000488864 KAZALD1Q96I82 304 aa16.3■□□□□ 0.2
CHD1L-208ENST00000488864 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHD1L-208ENST00000488864 NUP98P52948 1817 aa16.29■□□□□ 0.2
CHD1L-208ENST00000488864 DDX11L8A8MPP1 907 aa16.29■□□□□ 0.2
CHD1L-208ENST00000488864 ANKRD44Q8N8A2 993 aa16.29■□□□□ 0.2
CHD1L-208ENST00000488864 BCL2L12Q9HB09 334 aa16.29■□□□□ 0.2
CHD1L-208ENST00000488864 NARFQ9UHQ1 456 aa16.29■□□□□ 0.2
CHD1L-208ENST00000488864 BAG6P46379 1132 aa16.29■□□□□ 0.2
CHD1L-208ENST00000488864 EPHA10Q5JZY3 1008 aa16.29■□□□□ 0.2
CHD1L-208ENST00000488864 BICC1Q9H694 974 aaKnown RBP16.29■□□□□ 0.2
CHD1L-208ENST00000488864 GAS2L3Q86XJ1 694 aa16.28■□□□□ 0.2
CHD1L-208ENST00000488864 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
CHD1L-208ENST00000488864 SMC5Q8IY18 1101 aa16.28■□□□□ 0.2
CHD1L-208ENST00000488864 ZNF34Q8IZ26 560 aa16.28■□□□□ 0.2
CHD1L-208ENST00000488864 UTYO14607 1347 aa16.28■□□□□ 0.2
CHD1L-208ENST00000488864 TRIM28Q13263 835 aaKnown RBP16.28■□□□□ 0.2
CHD1L-208ENST00000488864 TNPO1Q92973 898 aaKnown RBP16.28■□□□□ 0.2
CHD1L-208ENST00000488864 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
CHD1L-208ENST00000488864 H7C1W4 665 aa16.27■□□□□ 0.2
CHD1L-208ENST00000488864 CASP7P55210 303 aa16.27■□□□□ 0.2
CHD1L-208ENST00000488864 TBC1D9BQ66K14 1250 aa16.27■□□□□ 0.2
CHD1L-208ENST00000488864 PPP1R42Q7Z4L9 355 aa16.27■□□□□ 0.2
CHD1L-208ENST00000488864 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
CHD1L-208ENST00000488864 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
CHD1L-208ENST00000488864 SUSD4Q5VX71 490 aa16.27■□□□□ 0.19
CHD1L-208ENST00000488864 USP42Q9H9J4 1324 aaKnown RBP16.27■□□□□ 0.19
CHD1L-208ENST00000488864 ESPNB1AK53 854 aa16.26■□□□□ 0.19
CHD1L-208ENST00000488864 APBB1O00213 710 aa16.26■□□□□ 0.19
CHD1L-208ENST00000488864 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
CHD1L-208ENST00000488864 SSFA2P28290 1259 aa16.26■□□□□ 0.19
CHD1L-208ENST00000488864 RBM25P49756 843 aaKnown RBP16.26■□□□□ 0.19
CHD1L-208ENST00000488864 UBR3Q6ZT12 1888 aa16.26■□□□□ 0.19
CHD1L-208ENST00000488864 HSP90AA1P07900 732 aaKnown RBP16.26■□□□□ 0.19
CHD1L-208ENST00000488864 ATP8B2P98198 1209 aa16.26■□□□□ 0.19
CHD1L-208ENST00000488864 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
CHD1L-208ENST00000488864 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
CHD1L-208ENST00000488864 ZBTB38Q8NAP3 1195 aaPredicted RBP16.25■□□□□ 0.19
CHD1L-208ENST00000488864 SNX21Q969T3 373 aa16.25■□□□□ 0.19
CHD1L-208ENST00000488864 ADRA2BP18089 450 aa16.25■□□□□ 0.19
CHD1L-208ENST00000488864 CCDC85AQ96PX6 553 aaPredicted RBP16.25■□□□□ 0.19
CHD1L-208ENST00000488864 PCCAP05165 728 aaPredicted RBP16.24■□□□□ 0.19
CHD1L-208ENST00000488864 COL23A1Q86Y22 540 aaPredicted RBP16.24■□□□□ 0.19
CHD1L-208ENST00000488864 LNPKQ9C0E8 428 aa16.24■□□□□ 0.19
CHD1L-208ENST00000488864 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
CHD1L-208ENST00000488864 EXOC6BQ9Y2D4 811 aa16.24■□□□□ 0.19
CHD1L-208ENST00000488864 C4AP0C0L4 1744 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms