RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 HOXD11P31277 338 aaPredicted RBP11.33□□□□□ -0.6
SMKR1-202ENST00000488846 PDE6BP35913 854 aa11.33□□□□□ -0.6
SMKR1-202ENST00000488846 ST5P78524 1137 aa11.33□□□□□ -0.6
SMKR1-202ENST00000488846 FKBP5Q13451 457 aaPredicted RBP11.33□□□□□ -0.6
SMKR1-202ENST00000488846 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
SMKR1-202ENST00000488846 UTP14AQ9BVJ6 771 aaKnown RBP11.33□□□□□ -0.6
SMKR1-202ENST00000488846 N4BP2Q86UW6 1770 aaPredicted RBP11.33□□□□□ -0.6
SMKR1-202ENST00000488846 DLEC1Q9Y238 1755 aa11.33□□□□□ -0.6
SMKR1-202ENST00000488846 PTPRCP08575 1304 aa11.33□□□□□ -0.6
SMKR1-202ENST00000488846 ABCC12Q96J65 1359 aa11.32□□□□□ -0.6
SMKR1-202ENST00000488846 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
SMKR1-202ENST00000488846 DPEP1P16444 411 aa11.32□□□□□ -0.6
SMKR1-202ENST00000488846 CRY2Q49AN0 593 aa11.32□□□□□ -0.6
SMKR1-202ENST00000488846 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
SMKR1-202ENST00000488846 DNAAF4Q8WXU2 420 aa11.32□□□□□ -0.6
SMKR1-202ENST00000488846 MYD88Q99836 296 aa11.32□□□□□ -0.6
SMKR1-202ENST00000488846 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
SMKR1-202ENST00000488846 ATP5J2-PTCD1G3V325 749 aa11.31□□□□□ -0.6
SMKR1-202ENST00000488846 SRGNP10124 158 aa11.31□□□□□ -0.6
SMKR1-202ENST00000488846 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
SMKR1-202ENST00000488846 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
SMKR1-202ENST00000488846 ZBTB38Q8NAP3 1195 aaPredicted RBP11.31□□□□□ -0.6
SMKR1-202ENST00000488846 LINS1Q8NG48 757 aa11.31□□□□□ -0.6
SMKR1-202ENST00000488846 TRMT112Q9UI30 125 aaKnown RBP11.31□□□□□ -0.6
SMKR1-202ENST00000488846 COL11A2P13942 1736 aaPredicted RBP11.31□□□□□ -0.6
SMKR1-202ENST00000488846 TNRC6CQ9HCJ0 1690 aaKnown RBP11.3□□□□□ -0.6
SMKR1-202ENST00000488846 FAM177BA6PVY3 158 aa11.3□□□□□ -0.6
SMKR1-202ENST00000488846 NEURL1BA8MQ27 555 aa11.3□□□□□ -0.6
SMKR1-202ENST00000488846 H0YIN7 160 aa11.3□□□□□ -0.6
SMKR1-202ENST00000488846 PCCAP05165 728 aaPredicted RBP11.3□□□□□ -0.6
SMKR1-202ENST00000488846 CHRNA5P30532 468 aa11.3□□□□□ -0.6
SMKR1-202ENST00000488846 NEXNQ0ZGT2 675 aa11.3□□□□□ -0.6
SMKR1-202ENST00000488846 BEND3Q5T5X7 828 aa11.3□□□□□ -0.6
SMKR1-202ENST00000488846 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
SMKR1-202ENST00000488846 ARHGAP45Q92619 1136 aa11.3□□□□□ -0.6
SMKR1-202ENST00000488846 SMC4Q9NTJ3 1288 aa11.3□□□□□ -0.6
SMKR1-202ENST00000488846 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
SMKR1-202ENST00000488846 SH3TC1Q8TE82 1336 aa11.3□□□□□ -0.6
SMKR1-202ENST00000488846 F6X3S4 739 aa11.29□□□□□ -0.6
SMKR1-202ENST00000488846 YBX3P16989 372 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMKR1-202ENST00000488846 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
SMKR1-202ENST00000488846 STYK1Q6J9G0 422 aa11.29□□□□□ -0.6
SMKR1-202ENST00000488846 C2CD5Q86YS7 1000 aa11.29□□□□□ -0.6
SMKR1-202ENST00000488846 SYNE4Q8N205 404 aa11.29□□□□□ -0.6
SMKR1-202ENST00000488846 MASTLQ96GX5 879 aa11.29□□□□□ -0.6
SMKR1-202ENST00000488846 BCL2L13Q9BXK5 485 aa11.29□□□□□ -0.6
SMKR1-202ENST00000488846 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
SMKR1-202ENST00000488846 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
SMKR1-202ENST00000488846 DDX60Q8IY21 1712 aaKnown RBP11.29□□□□□ -0.6
SMKR1-202ENST00000488846 LAMB2P55268 1798 aa11.28□□□□□ -0.6
SMKR1-202ENST00000488846 H7C1W4 665 aa11.28□□□□□ -0.6
SMKR1-202ENST00000488846 NPHP1O15259 732 aa11.28□□□□□ -0.6
SMKR1-202ENST00000488846 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
SMKR1-202ENST00000488846 NPR1P16066 1061 aa11.28□□□□□ -0.6
SMKR1-202ENST00000488846 GTF2E1P29083 439 aaPredicted RBP11.28□□□□□ -0.6
SMKR1-202ENST00000488846 CASP7P55210 303 aa11.28□□□□□ -0.6
SMKR1-202ENST00000488846 GCKRQ14397 625 aa11.28□□□□□ -0.6
SMKR1-202ENST00000488846 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
SMKR1-202ENST00000488846 FAM89AQ96GI7 184 aa11.28□□□□□ -0.6
SMKR1-202ENST00000488846 KIF16BQ96L93 1317 aa11.28□□□□□ -0.6
SMKR1-202ENST00000488846 ARFGEF1Q9Y6D6 1849 aa11.28□□□□□ -0.6
SMKR1-202ENST00000488846 SF3B3Q15393 1217 aaKnown RBP11.27□□□□□ -0.61
SMKR1-202ENST00000488846 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.61
SMKR1-202ENST00000488846 NLRP3Q96P20 1036 aa11.27□□□□□ -0.61
SMKR1-202ENST00000488846 NOB1Q9ULX3 412 aaKnown RBP11.27□□□□□ -0.61
SMKR1-202ENST00000488846 UTYO14607 1347 aa11.27□□□□□ -0.61
SMKR1-202ENST00000488846 IRS4O14654 1257 aaPredicted RBP11.26□□□□□ -0.61
SMKR1-202ENST00000488846 GRIN3BO60391 1043 aa11.26□□□□□ -0.61
SMKR1-202ENST00000488846 BCAR3O75815 825 aa11.26□□□□□ -0.61
SMKR1-202ENST00000488846 HCLS1P14317 486 aaPredicted RBP11.26□□□□□ -0.61
SMKR1-202ENST00000488846 HSP90B1P14625 803 aaKnown RBP11.26□□□□□ -0.61
SMKR1-202ENST00000488846 DALRD3Q5D0E6 543 aaKnown RBP11.26□□□□□ -0.61
SMKR1-202ENST00000488846 TTLL6Q8N841 843 aa11.26□□□□□ -0.61
SMKR1-202ENST00000488846 C7orf43Q8WVR3 580 aa11.26□□□□□ -0.61
SMKR1-202ENST00000488846 CNKSR1Q969H4 720 aa11.26□□□□□ -0.61
SMKR1-202ENST00000488846 CRAMP1Q96RY5 1269 aa11.26□□□□□ -0.61
SMKR1-202ENST00000488846 PLA2G12BQ9BX93 195 aa11.26□□□□□ -0.61
SMKR1-202ENST00000488846 ALDH1B1P30837 517 aa11.25□□□□□ -0.61
SMKR1-202ENST00000488846 GPR162Q16538 588 aa11.25□□□□□ -0.61
SMKR1-202ENST00000488846 API5Q9BZZ5 524 aaKnown RBP11.25□□□□□ -0.61
SMKR1-202ENST00000488846 SRCIN1Q9C0H9 1055 aa11.25□□□□□ -0.61
SMKR1-202ENST00000488846 ABCC4O15439 1325 aa11.25□□□□□ -0.61
SMKR1-202ENST00000488846 SLX4Q8IY92 1834 aa11.24□□□□□ -0.61
SMKR1-202ENST00000488846 IPO8O15397 1037 aaKnown RBP11.24□□□□□ -0.61
SMKR1-202ENST00000488846 PDE8AO60658 829 aa11.24□□□□□ -0.61
SMKR1-202ENST00000488846 PRPF40BQ6NWY9 871 aaKnown RBP11.24□□□□□ -0.61
SMKR1-202ENST00000488846 ATF7IPQ6VMQ6 1270 aa11.24□□□□□ -0.61
SMKR1-202ENST00000488846 ZNF622Q969S3 477 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMKR1-202ENST00000488846 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
SMKR1-202ENST00000488846 SNED1Q8TER0 1413 aa11.24□□□□□ -0.61
SMKR1-202ENST00000488846 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
SMKR1-202ENST00000488846 GRM8O00222 908 aa11.23□□□□□ -0.61
SMKR1-202ENST00000488846 CSF1RP07333 972 aa11.23□□□□□ -0.61
SMKR1-202ENST00000488846 TRIM27P14373 513 aa11.23□□□□□ -0.61
SMKR1-202ENST00000488846 RTL5Q5HYW3 569 aaPredicted RBP11.23□□□□□ -0.61
SMKR1-202ENST00000488846 INTS3Q68E01 1043 aaKnown RBP11.23□□□□□ -0.61
SMKR1-202ENST00000488846 SLC4A10Q6U841 1118 aa11.23□□□□□ -0.61
SMKR1-202ENST00000488846 UBE3BQ7Z3V4 1068 aa11.23□□□□□ -0.61
SMKR1-202ENST00000488846 RBM17Q96I25 401 aaKnown RBP11.23□□□□□ -0.61
SMKR1-202ENST00000488846 RTL9Q8NET4 1388 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms