RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CWF19L2Q2TBE0 894 aaKnown RBP24.47■■□□□ 1.51
CCM2-216ENST00000488727 SLC4A10Q6U841 1118 aa24.47■■□□□ 1.51
CCM2-216ENST00000488727 NEXNQ0ZGT2 675 aa24.46■■□□□ 1.51
CCM2-216ENST00000488727 PARP10Q53GL7 1025 aa24.46■■□□□ 1.51
CCM2-216ENST00000488727 BEND3Q5T5X7 828 aa24.46■■□□□ 1.51
CCM2-216ENST00000488727 API5Q9BZZ5 524 aaKnown RBP24.46■■□□□ 1.51
CCM2-216ENST00000488727 PXDNLA1KZ92 1463 aa24.46■■□□□ 1.51
CCM2-216ENST00000488727 IPO8O15397 1037 aaKnown RBP24.45■■□□□ 1.5
CCM2-216ENST00000488727 ATF7IPQ6VMQ6 1270 aa24.45■■□□□ 1.5
CCM2-216ENST00000488727 NEURL1BA8MQ27 555 aa24.44■■□□□ 1.5
CCM2-216ENST00000488727 NTSR2O95665 410 aa24.44■■□□□ 1.5
CCM2-216ENST00000488727 ZKSCAN2Q63HK3 967 aa24.44■■□□□ 1.5
CCM2-216ENST00000488727 NBPF5PQ86XG9 351 aaPredicted RBP24.44■■□□□ 1.5
CCM2-216ENST00000488727 LINS1Q8NG48 757 aa24.44■■□□□ 1.5
CCM2-216ENST00000488727 IBTKQ9P2D0 1353 aaPredicted RBP24.44■■□□□ 1.5
CCM2-216ENST00000488727 PRR5LQ6MZQ0 368 aa24.44■■□□□ 1.5
CCM2-216ENST00000488727 KIF13BQ9NQT8 1826 aa24.43■■□□□ 1.5
CCM2-216ENST00000488727 CCDC24Q8N4L8 307 aa24.43■■□□□ 1.5
CCM2-216ENST00000488727 CCDC191Q8NCU4 936 aa24.43■■□□□ 1.5
CCM2-216ENST00000488727 ABCC4O15439 1325 aa24.42■■□□□ 1.5
CCM2-216ENST00000488727 ANKRD31Q8N7Z5 1873 aa24.42■■□□□ 1.5
CCM2-216ENST00000488727 CNBD1Q8NA66 436 aa24.42■■□□□ 1.5
CCM2-216ENST00000488727 CLUAP1Q96AJ1 413 aa24.42■■□□□ 1.5
CCM2-216ENST00000488727 C10orf71Q711Q0 1435 aa24.42■■□□□ 1.5
CCM2-216ENST00000488727 C20orf194Q5TEA3 1177 aa24.41■■□□□ 1.5
CCM2-216ENST00000488727 TPTE2Q6XPS3 522 aa24.41■■□□□ 1.5
CCM2-216ENST00000488727 PPP1R42Q7Z4L9 355 aa24.41■■□□□ 1.5
CCM2-216ENST00000488727 NUTM1Q86Y26 1132 aa24.41■■□□□ 1.5
CCM2-216ENST00000488727 UTP14AQ9BVJ6 771 aaKnown RBP24.41■■□□□ 1.5
CCM2-216ENST00000488727 CWC25Q9NXE8 425 aaPredicted RBP24.41■■□□□ 1.5
CCM2-216ENST00000488727 SRCIN1Q9C0H9 1055 aa24.41■■□□□ 1.5
CCM2-216ENST00000488727 ABCC12Q96J65 1359 aa24.4■■□□□ 1.5
CCM2-216ENST00000488727 SYNE4Q8N205 404 aa24.4■■□□□ 1.5
CCM2-216ENST00000488727 NYXQ9GZU5 481 aa24.4■■□□□ 1.5
CCM2-216ENST00000488727 TRMT112Q9UI30 125 aaKnown RBP24.4■■□□□ 1.5
CCM2-216ENST00000488727 GCKRQ14397 625 aa24.39■■□□□ 1.5
CCM2-216ENST00000488727 ERFEQ4G0M1 354 aa24.39■■□□□ 1.5
CCM2-216ENST00000488727 DDX60Q8IY21 1712 aaKnown RBP24.39■■□□□ 1.49
CCM2-216ENST00000488727 TNRC6CQ9HCJ0 1690 aaKnown RBP24.38■■□□□ 1.49
CCM2-216ENST00000488727 NPHP1O15259 732 aa24.38■■□□□ 1.49
CCM2-216ENST00000488727 FAM89AQ96GI7 184 aa24.38■■□□□ 1.49
CCM2-216ENST00000488727 ALDH1L1O75891 902 aa24.38■■□□□ 1.49
CCM2-216ENST00000488727 RLBP1P12271 317 aa24.38■■□□□ 1.49
CCM2-216ENST00000488727 RTL5Q5HYW3 569 aaPredicted RBP24.38■■□□□ 1.49
CCM2-216ENST00000488727 JARID2Q92833 1246 aaPredicted RBP24.38■■□□□ 1.49
CCM2-216ENST00000488727 LAMB2P55268 1798 aa24.37■■□□□ 1.49
CCM2-216ENST00000488727 ZBTB38Q8NAP3 1195 aaPredicted RBP24.37■■□□□ 1.49
CCM2-216ENST00000488727 SH3TC1Q8TE82 1336 aa24.37■■□□□ 1.49
CCM2-216ENST00000488727 KIAA1551Q9HCM1 1747 aa24.37■■□□□ 1.49
CCM2-216ENST00000488727 GTF2E1P29083 439 aaPredicted RBP24.36■■□□□ 1.49
CCM2-216ENST00000488727 INTS3Q68E01 1043 aaKnown RBP24.36■■□□□ 1.49
CCM2-216ENST00000488727 PPP1R1BQ9UD71 204 aaPredicted RBP24.36■■□□□ 1.49
CCM2-216ENST00000488727 PCCAP05165 728 aaPredicted RBP24.35■■□□□ 1.49
CCM2-216ENST00000488727 CCT4P50991 539 aaKnown RBP24.35■■□□□ 1.49
CCM2-216ENST00000488727 ST5P78524 1137 aa24.35■■□□□ 1.49
CCM2-216ENST00000488727 DZIP1LQ8IYY4 767 aaKnown RBP24.35■■□□□ 1.49
CCM2-216ENST00000488727 KLHL34Q8N239 644 aa24.35■■□□□ 1.49
CCM2-216ENST00000488727 FHDC1Q9C0D6 1143 aaPredicted RBP24.35■■□□□ 1.49
CCM2-216ENST00000488727 H7C1W4 665 aa24.34■■□□□ 1.49
CCM2-216ENST00000488727 FTSJ3Q8IY81 847 aaKnown RBP24.34■■□□□ 1.49
CCM2-216ENST00000488727 TMEM57Q8N5G2 664 aa24.34■■□□□ 1.49
CCM2-216ENST00000488727 PANK1Q8TE04 598 aa24.34■■□□□ 1.49
CCM2-216ENST00000488727 KDM2BQ8NHM5 1336 aa24.34■■□□□ 1.49
CCM2-216ENST00000488727 COL11A2P13942 1736 aaPredicted RBP24.34■■□□□ 1.49
CCM2-216ENST00000488727 RIC1Q4ADV7 1423 aa24.34■■□□□ 1.49
CCM2-216ENST00000488727 MS4A1P11836 297 aa24.33■■□□□ 1.49
CCM2-216ENST00000488727 CASP7P55210 303 aa24.33■■□□□ 1.49
CCM2-216ENST00000488727 UBE3BQ7Z3V4 1068 aa24.33■■□□□ 1.49
CCM2-216ENST00000488727 GRM8O00222 908 aa24.32■■□□□ 1.48
CCM2-216ENST00000488727 HCLS1P14317 486 aaPredicted RBP24.32■■□□□ 1.48
CCM2-216ENST00000488727 SLC10A5Q5PT55 438 aa24.32■■□□□ 1.48
CCM2-216ENST00000488727 BRIP1Q9BX63 1249 aa24.32■■□□□ 1.48
CCM2-216ENST00000488727 CD2APQ9Y5K6 639 aa24.32■■□□□ 1.48
CCM2-216ENST00000488727 USP44Q9H0E7 712 aa24.32■■□□□ 1.48
CCM2-216ENST00000488727 CDHR2Q9BYE9 1310 aa24.31■■□□□ 1.48
CCM2-216ENST00000488727 IRS4O14654 1257 aaPredicted RBP24.31■■□□□ 1.48
CCM2-216ENST00000488727 NBPF7P0C2Y1 421 aaPredicted RBP24.31■■□□□ 1.48
CCM2-216ENST00000488727 PDE3AQ14432 1141 aa24.31■■□□□ 1.48
CCM2-216ENST00000488727 C3orf67Q6ZVT6 689 aa24.31■■□□□ 1.48
CCM2-216ENST00000488727 C9orf78Q9NZ63 289 aaPredicted RBP24.31■■□□□ 1.48
CCM2-216ENST00000488727 UTYO14607 1347 aa24.3■■□□□ 1.48
CCM2-216ENST00000488727 MYH3P11055 1940 aa24.3■■□□□ 1.48
CCM2-216ENST00000488727 NLGN2Q8NFZ4 835 aa24.3■■□□□ 1.48
CCM2-216ENST00000488727 DLEC1Q9Y238 1755 aa24.3■■□□□ 1.48
CCM2-216ENST00000488727 CENPQQ7L2Z9 268 aaPredicted RBP24.29■■□□□ 1.48
CCM2-216ENST00000488727 SYT17Q9BSW7 474 aa24.29■■□□□ 1.48
CCM2-216ENST00000488727 KLRG2A4D1S0 409 aaPredicted RBP24.28■■□□□ 1.48
CCM2-216ENST00000488727 PDE6BP35913 854 aa24.28■■□□□ 1.48
CCM2-216ENST00000488727 CHRNA5P30532 468 aa24.27■■□□□ 1.48
CCM2-216ENST00000488727 ITPRIPQ8IWB1 547 aa24.27■■□□□ 1.48
CCM2-216ENST00000488727 MEIS3Q99687 375 aa24.27■■□□□ 1.48
CCM2-216ENST00000488727 BRCA1P38398 1863 aaKnown RBP24.27■■□□□ 1.48
CCM2-216ENST00000488727 ANP32EQ9BTT0 268 aa24.27■■□□□ 1.48
CCM2-216ENST00000488727 A0A0G2JLW4 131 aa24.26■■□□□ 1.47
CCM2-216ENST00000488727 TGFB2P61812 414 aa24.26■■□□□ 1.47
CCM2-216ENST00000488727 CRY2Q49AN0 593 aa24.26■■□□□ 1.47
CCM2-216ENST00000488727 NLRP3Q96P20 1036 aa24.26■■□□□ 1.47
CCM2-216ENST00000488727 DPEP1P16444 411 aa24.25■■□□□ 1.47
CCM2-216ENST00000488727 COG6Q9Y2V7 657 aa24.25■■□□□ 1.47
CCM2-216ENST00000488727 PDE8AO60658 829 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms