RNA–Protein interactions for RNA: ENST00000488685.1

SH2D3C-212, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best)

Gene SH2D3C, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-212ENST00000488685 PRPF40BQ6NWY9 871 aaKnown RBP17.74■□□□□ 0.43
SH2D3C-212ENST00000488685 ISCA1Q9BUE6 129 aa17.74■□□□□ 0.43
SH2D3C-212ENST00000488685 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
SH2D3C-212ENST00000488685 SLX4Q8IY92 1834 aa17.74■□□□□ 0.43
SH2D3C-212ENST00000488685 ARFGEF2Q9Y6D5 1785 aa17.74■□□□□ 0.43
SH2D3C-212ENST00000488685 ZNF521Q96K83 1311 aa17.73■□□□□ 0.43
SH2D3C-212ENST00000488685 SBF1O95248 1867 aa17.73■□□□□ 0.43
SH2D3C-212ENST00000488685 TRIM28Q13263 835 aaKnown RBP17.73■□□□□ 0.43
SH2D3C-212ENST00000488685 RIC3Q7Z5B4 369 aa17.73■□□□□ 0.43
SH2D3C-212ENST00000488685 C7orf43Q8WVR3 580 aa17.73■□□□□ 0.43
SH2D3C-212ENST00000488685 TNRC6CQ9HCJ0 1690 aaKnown RBP17.73■□□□□ 0.43
SH2D3C-212ENST00000488685 VAMP4O75379 141 aa17.72■□□□□ 0.43
SH2D3C-212ENST00000488685 HOXA10P31260 410 aaPredicted RBP17.72■□□□□ 0.43
SH2D3C-212ENST00000488685 SOGA3Q5TF21 947 aa17.72■□□□□ 0.43
SH2D3C-212ENST00000488685 NLRP3Q96P20 1036 aa17.72■□□□□ 0.43
SH2D3C-212ENST00000488685 STK31Q9BXU1 1019 aa17.72■□□□□ 0.43
SH2D3C-212ENST00000488685 NFKBIEO00221 500 aa17.71■□□□□ 0.43
SH2D3C-212ENST00000488685 EXOSC9Q06265 439 aaKnown RBP17.71■□□□□ 0.43
SH2D3C-212ENST00000488685 MYH16Q9H6N6 1097 aa17.71■□□□□ 0.43
SH2D3C-212ENST00000488685 ZNF219Q9P2Y4 722 aaPredicted RBP17.71■□□□□ 0.43
SH2D3C-212ENST00000488685 TRMT112Q9UI30 125 aaKnown RBP17.71■□□□□ 0.43
SH2D3C-212ENST00000488685 CACNA1SQ13698 1873 aa17.7■□□□□ 0.42
SH2D3C-212ENST00000488685 ATP5J2-PTCD1G3V325 749 aa17.7■□□□□ 0.42
SH2D3C-212ENST00000488685 DDX58O95786 925 aaKnown RBP17.7■□□□□ 0.42
SH2D3C-212ENST00000488685 LMNB1P20700 586 aa17.7■□□□□ 0.42
SH2D3C-212ENST00000488685 PRELPP51888 382 aa17.7■□□□□ 0.42
SH2D3C-212ENST00000488685 RASSF7Q02833 373 aa17.7■□□□□ 0.42
SH2D3C-212ENST00000488685 RPGRQ92834 1020 aaKnown RBP17.7■□□□□ 0.42
SH2D3C-212ENST00000488685 GPBP1L1Q9HC44 474 aaPredicted RBP17.7■□□□□ 0.42
SH2D3C-212ENST00000488685 RNF181Q9P0P0 153 aa17.7■□□□□ 0.42
SH2D3C-212ENST00000488685 SH3TC1Q8TE82 1336 aa17.7■□□□□ 0.42
SH2D3C-212ENST00000488685 FER1L6Q2WGJ9 1857 aa17.69■□□□□ 0.42
SH2D3C-212ENST00000488685 TCERG1O14776 1098 aaKnown RBP17.69■□□□□ 0.42
SH2D3C-212ENST00000488685 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
SH2D3C-212ENST00000488685 C3orf67Q6ZVT6 689 aa17.69■□□□□ 0.42
SH2D3C-212ENST00000488685 SYNE4Q8N205 404 aa17.69■□□□□ 0.42
SH2D3C-212ENST00000488685 RBM17Q96I25 401 aaKnown RBP17.69■□□□□ 0.42
SH2D3C-212ENST00000488685 CRAMP1Q96RY5 1269 aa17.69■□□□□ 0.42
SH2D3C-212ENST00000488685 LTBP3Q9NS15 1303 aa17.69■□□□□ 0.42
SH2D3C-212ENST00000488685 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
SH2D3C-212ENST00000488685 KSR2Q6VAB6 950 aa17.68■□□□□ 0.42
SH2D3C-212ENST00000488685 METTL22Q9BUU2 404 aaPredicted RBP17.68■□□□□ 0.42
SH2D3C-212ENST00000488685 HCLS1P14317 486 aaPredicted RBP17.67■□□□□ 0.42
SH2D3C-212ENST00000488685 CCDC93Q567U6 631 aa17.67■□□□□ 0.42
SH2D3C-212ENST00000488685 ZNF526Q8TF50 670 aaPredicted RBP17.67■□□□□ 0.42
SH2D3C-212ENST00000488685 MYD88Q99836 296 aa17.67■□□□□ 0.42
SH2D3C-212ENST00000488685 TAOK3Q9H2K8 898 aa17.67■□□□□ 0.42
SH2D3C-212ENST00000488685 ZC3H4Q9UPT8 1303 aaKnown RBP17.67■□□□□ 0.42
SH2D3C-212ENST00000488685 PI4KAP2A4QPH2 592 aa17.66■□□□□ 0.42
SH2D3C-212ENST00000488685 CC2D2BQ6DHV5 1058 aa17.66■□□□□ 0.42
SH2D3C-212ENST00000488685 G2E3Q7L622 706 aa17.66■□□□□ 0.42
SH2D3C-212ENST00000488685 RTKN2Q8IZC4 609 aa17.66■□□□□ 0.42
SH2D3C-212ENST00000488685 PI4KAP1Q8N8J0 262 aa17.66■□□□□ 0.42
SH2D3C-212ENST00000488685 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
SH2D3C-212ENST00000488685 FAM89AQ96GI7 184 aa17.66■□□□□ 0.42
SH2D3C-212ENST00000488685 MAP3K2Q9Y2U5 619 aa17.66■□□□□ 0.42
SH2D3C-212ENST00000488685 CCDC88AQ3V6T2 1871 aa17.66■□□□□ 0.42
SH2D3C-212ENST00000488685 ZBTB38Q8NAP3 1195 aaPredicted RBP17.65■□□□□ 0.42
SH2D3C-212ENST00000488685 ZNF428Q96B54 188 aa17.65■□□□□ 0.42
SH2D3C-212ENST00000488685 CACNA1FO60840 1977 aa17.65■□□□□ 0.42
SH2D3C-212ENST00000488685 LAMB2P55268 1798 aa17.64■□□□□ 0.41
SH2D3C-212ENST00000488685 GRIPAP1Q4V328 841 aa17.64■□□□□ 0.41
SH2D3C-212ENST00000488685 OLFM4Q6UX06 510 aa17.64■□□□□ 0.41
SH2D3C-212ENST00000488685 MIER1Q8N108 512 aa17.64■□□□□ 0.41
SH2D3C-212ENST00000488685 E9PSI1 815 aa17.63■□□□□ 0.41
SH2D3C-212ENST00000488685 BBOX1O75936 387 aa17.63■□□□□ 0.41
SH2D3C-212ENST00000488685 FKBP4Q02790 459 aaKnown RBP eCLIP17.63■□□□□ 0.41
SH2D3C-212ENST00000488685 FLIIQ13045 1269 aa17.63■□□□□ 0.41
SH2D3C-212ENST00000488685 SF3B3Q15393 1217 aaKnown RBP17.63■□□□□ 0.41
SH2D3C-212ENST00000488685 CWC25Q9NXE8 425 aaPredicted RBP17.63■□□□□ 0.41
SH2D3C-212ENST00000488685 DDX60Q8IY21 1712 aaKnown RBP17.63■□□□□ 0.41
SH2D3C-212ENST00000488685 DICER1Q9UPY3 1922 aaKnown RBP17.62■□□□□ 0.41
SH2D3C-212ENST00000488685 IRS4O14654 1257 aaPredicted RBP17.62■□□□□ 0.41
SH2D3C-212ENST00000488685 PPEF1O14829 653 aaPredicted RBP17.62■□□□□ 0.41
SH2D3C-212ENST00000488685 PCCAP05165 728 aaPredicted RBP17.62■□□□□ 0.41
SH2D3C-212ENST00000488685 C1QTNF8P60827 252 aa17.62■□□□□ 0.41
SH2D3C-212ENST00000488685 SLFN5Q08AF3 891 aa17.62■□□□□ 0.41
SH2D3C-212ENST00000488685 ABCC4O15439 1325 aa17.62■□□□□ 0.41
SH2D3C-212ENST00000488685 KDM2BQ8NHM5 1336 aa17.62■□□□□ 0.41
SH2D3C-212ENST00000488685 SNED1Q8TER0 1413 aa17.62■□□□□ 0.41
SH2D3C-212ENST00000488685 KIF3CO14782 793 aa17.61■□□□□ 0.41
SH2D3C-212ENST00000488685 IGKV5-2P06315 115 aa17.61■□□□□ 0.41
SH2D3C-212ENST00000488685 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
SH2D3C-212ENST00000488685 NEXNQ0ZGT2 675 aa17.61■□□□□ 0.41
SH2D3C-212ENST00000488685 RTL5Q5HYW3 569 aaPredicted RBP17.61■□□□□ 0.41
SH2D3C-212ENST00000488685 DDX46Q7L014 1031 aaKnown RBP17.61■□□□□ 0.41
SH2D3C-212ENST00000488685 ATP6V0A2Q9Y487 856 aa17.61■□□□□ 0.41
SH2D3C-212ENST00000488685 GLTPD2A6NH11 291 aa17.6■□□□□ 0.41
SH2D3C-212ENST00000488685 FKBP5Q13451 457 aaPredicted RBP17.6■□□□□ 0.41
SH2D3C-212ENST00000488685 PSMD1Q99460 953 aa17.6■□□□□ 0.41
SH2D3C-212ENST00000488685 GRAPQ13588 217 aa17.59■□□□□ 0.41
SH2D3C-212ENST00000488685 SP8Q8IXZ3 490 aa17.59■□□□□ 0.41
SH2D3C-212ENST00000488685 TRMT2AQ8IZ69 625 aaKnown RBP17.59■□□□□ 0.41
SH2D3C-212ENST00000488685 GRAPLQ8TC17 118 aaPredicted RBP17.59■□□□□ 0.41
SH2D3C-212ENST00000488685 NMRK2Q9NPI5 230 aa17.59■□□□□ 0.41
SH2D3C-212ENST00000488685 TIAM2Q8IVF5 1701 aa17.58■□□□□ 0.41
SH2D3C-212ENST00000488685 NEURL1BA8MQ27 555 aa17.58■□□□□ 0.4
SH2D3C-212ENST00000488685 CWF19L2Q2TBE0 894 aaKnown RBP17.58■□□□□ 0.4
SH2D3C-212ENST00000488685 DPY19L2Q6NUT2 758 aa17.58■□□□□ 0.4
SH2D3C-212ENST00000488685 DNAAF4Q8WXU2 420 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms