RNA–Protein interactions for RNA: ENST00000488675.5

TSC2-214, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-214ENST00000488675 MKRN1Q9UHC7 482 aaKnown RBP22.34■■□□□ 1.17
TSC2-214ENST00000488675 LAMB4A4D0S4 1761 aa22.33■■□□□ 1.17
TSC2-214ENST00000488675 HOXB7P09629 217 aa22.33■■□□□ 1.17
TSC2-214ENST00000488675 ZBTB1Q9Y2K1 713 aa22.33■■□□□ 1.17
TSC2-214ENST00000488675 CARMIL3Q8ND23 1372 aa22.33■■□□□ 1.17
TSC2-214ENST00000488675 SNRPA1P09661 255 aaKnown RBP22.32■■□□□ 1.16
TSC2-214ENST00000488675 ERFEQ4G0M1 354 aa22.32■■□□□ 1.16
TSC2-214ENST00000488675 TEX13AQ9BXU3 409 aaPredicted RBP22.32■■□□□ 1.16
TSC2-214ENST00000488675 FOXN1O15353 648 aa22.31■■□□□ 1.16
TSC2-214ENST00000488675 PRDM10Q9NQV6 1147 aa22.31■■□□□ 1.16
TSC2-214ENST00000488675 PDZRN3Q9UPQ7 1066 aa22.31■■□□□ 1.16
TSC2-214ENST00000488675 RGL2O15211 777 aa22.3■■□□□ 1.16
TSC2-214ENST00000488675 EXOSC9Q06265 439 aaKnown RBP22.3■■□□□ 1.16
TSC2-214ENST00000488675 C8orf58Q8NAV2 365 aa22.3■■□□□ 1.16
TSC2-214ENST00000488675 CNTNAP1P78357 1384 aa22.29■■□□□ 1.16
TSC2-214ENST00000488675 CCDC88AQ3V6T2 1871 aa22.29■■□□□ 1.16
TSC2-214ENST00000488675 C21orf2O43822 256 aa22.29■■□□□ 1.16
TSC2-214ENST00000488675 CT47B1P0C2W7 299 aaPredicted RBP22.29■■□□□ 1.16
TSC2-214ENST00000488675 KRT24Q2M2I5 525 aa22.29■■□□□ 1.16
TSC2-214ENST00000488675 CHMP4AQ9BY43 222 aa22.29■■□□□ 1.16
TSC2-214ENST00000488675 LTBP3Q9NS15 1303 aa22.29■■□□□ 1.16
TSC2-214ENST00000488675 POTEIP0CG38 1075 aa22.28■■□□□ 1.16
TSC2-214ENST00000488675 POTEJP0CG39 1038 aa22.28■■□□□ 1.16
TSC2-214ENST00000488675 PDE6BP35913 854 aa22.28■■□□□ 1.16
TSC2-214ENST00000488675 ZNF622Q969S3 477 aaKnown RBP eCLIP22.28■■□□□ 1.16
TSC2-214ENST00000488675 BRIP1Q9BX63 1249 aa22.28■■□□□ 1.16
TSC2-214ENST00000488675 CACNA1FO60840 1977 aa22.28■■□□□ 1.16
TSC2-214ENST00000488675 TWISTNBQ3B726 338 aaPredicted RBP22.27■■□□□ 1.16
TSC2-214ENST00000488675 BICDL1Q6ZP65 573 aa22.27■■□□□ 1.16
TSC2-214ENST00000488675 TSPYL6Q8N831 410 aa22.27■■□□□ 1.16
TSC2-214ENST00000488675 DDNO94850 711 aaPredicted RBP22.26■■□□□ 1.15
TSC2-214ENST00000488675 CANXP27824 592 aaKnown RBP22.26■■□□□ 1.15
TSC2-214ENST00000488675 ZNF428Q96B54 188 aa22.26■■□□□ 1.15
TSC2-214ENST00000488675 PASKQ96RG2 1323 aa22.26■■□□□ 1.15
TSC2-214ENST00000488675 A0A087WZG4 1122 aa22.25■■□□□ 1.15
TSC2-214ENST00000488675 STARD3NLO95772 234 aa22.25■■□□□ 1.15
TSC2-214ENST00000488675 CTCFP49711 727 aaPredicted RBP22.25■■□□□ 1.15
TSC2-214ENST00000488675 EIF5P55010 431 aaKnown RBP22.25■■□□□ 1.15
TSC2-214ENST00000488675 TAOK3Q9H2K8 898 aa22.25■■□□□ 1.15
TSC2-214ENST00000488675 VAMP4O75379 141 aa22.24■■□□□ 1.15
TSC2-214ENST00000488675 PRAMEF22A3QJZ6 481 aa22.23■■□□□ 1.15
TSC2-214ENST00000488675 ELL2O00472 640 aaPredicted RBP22.23■■□□□ 1.15
TSC2-214ENST00000488675 SLC34A2O95436 690 aa22.23■■□□□ 1.15
TSC2-214ENST00000488675 PYGBP11216 843 aa22.23■■□□□ 1.15
TSC2-214ENST00000488675 TBC1D9BQ66K14 1250 aa22.23■■□□□ 1.15
TSC2-214ENST00000488675 PRR5LQ6MZQ0 368 aa22.23■■□□□ 1.15
TSC2-214ENST00000488675 AIDAQ96BJ3 306 aa22.23■■□□□ 1.15
TSC2-214ENST00000488675 USP16Q9Y5T5 823 aa22.23■■□□□ 1.15
TSC2-214ENST00000488675 FER1L6Q2WGJ9 1857 aa22.23■■□□□ 1.15
TSC2-214ENST00000488675 ERBB4Q15303 1308 aa22.23■■□□□ 1.15
TSC2-214ENST00000488675 DICER1Q9UPY3 1922 aaKnown RBP22.23■■□□□ 1.15
TSC2-214ENST00000488675 IQCA1LA6NCM1 817 aa22.22■■□□□ 1.15
TSC2-214ENST00000488675 LDHDQ86WU2 507 aa22.22■■□□□ 1.15
TSC2-214ENST00000488675 CHRM1P11229 460 aaPredicted RBP22.21■■□□□ 1.15
TSC2-214ENST00000488675 VEGFBP49765 207 aa22.21■■□□□ 1.15
TSC2-214ENST00000488675 HDGFL1Q5TGJ6 251 aa22.21■■□□□ 1.15
TSC2-214ENST00000488675 L3MBTL3Q96JM7 780 aaPredicted RBP22.21■■□□□ 1.15
TSC2-214ENST00000488675 ANKRD31Q8N7Z5 1873 aa22.21■■□□□ 1.15
TSC2-214ENST00000488675 SOGA3Q5TF21 947 aa22.2■■□□□ 1.14
TSC2-214ENST00000488675 CCDC30Q5VVM6 783 aa22.2■■□□□ 1.14
TSC2-214ENST00000488675 CNKSR1Q969H4 720 aa22.2■■□□□ 1.14
TSC2-214ENST00000488675 WBP1LQ9NX94 342 aa22.2■■□□□ 1.14
TSC2-214ENST00000488675 TMEM88BA6NKF7 163 aa22.19■■□□□ 1.14
TSC2-214ENST00000488675 ITGBL1O95965 494 aaPredicted RBP22.19■■□□□ 1.14
TSC2-214ENST00000488675 EIF2S2P20042 333 aaKnown RBP22.19■■□□□ 1.14
TSC2-214ENST00000488675 STYK1Q6J9G0 422 aa22.19■■□□□ 1.14
TSC2-214ENST00000488675 CCDC24Q8N4L8 307 aa22.19■■□□□ 1.14
TSC2-214ENST00000488675 TAF1DQ9H5J8 278 aaPredicted RBP22.19■■□□□ 1.14
TSC2-214ENST00000488675 COL11A2P13942 1736 aaPredicted RBP22.18■■□□□ 1.14
TSC2-214ENST00000488675 CD44P16070 742 aaKnown RBP22.18■■□□□ 1.14
TSC2-214ENST00000488675 SRGNP10124 158 aa22.17■■□□□ 1.14
TSC2-214ENST00000488675 ALDH1L2Q3SY69 923 aa22.17■■□□□ 1.14
TSC2-214ENST00000488675 PRPF40BQ6NWY9 871 aaKnown RBP22.17■■□□□ 1.14
TSC2-214ENST00000488675 DBF4Q9UBU7 674 aaPredicted RBP22.17■■□□□ 1.14
TSC2-214ENST00000488675 LBX1P52954 281 aa22.16■■□□□ 1.14
TSC2-214ENST00000488675 STK31Q9BXU1 1019 aa22.16■■□□□ 1.14
TSC2-214ENST00000488675 DDX21Q9NR30 783 aaKnown RBP eCLIP22.16■■□□□ 1.14
TSC2-214ENST00000488675 TBC1D2BQ9UPU7 963 aa22.16■■□□□ 1.14
TSC2-214ENST00000488675 A1BGP04217 495 aa22.15■■□□□ 1.14
TSC2-214ENST00000488675 IL6STP40189 918 aaPredicted RBP22.15■■□□□ 1.14
TSC2-214ENST00000488675 CNBD1Q8NA66 436 aa22.15■■□□□ 1.14
TSC2-214ENST00000488675 MASTLQ96GX5 879 aa22.15■■□□□ 1.14
TSC2-214ENST00000488675 SETDB2Q96T68 719 aa22.15■■□□□ 1.14
TSC2-214ENST00000488675 NBPF26B4DH59 902 aa22.14■■□□□ 1.13
TSC2-214ENST00000488675 PDIA6Q15084 440 aa22.14■■□□□ 1.13
TSC2-214ENST00000488675 NBPF10Q6P3W6 841 aaKnown RBP22.14■■□□□ 1.13
TSC2-214ENST00000488675 NBPF15Q8N660 670 aa22.14■■□□□ 1.13
TSC2-214ENST00000488675 CHPF2Q9P2E5 772 aa22.14■■□□□ 1.13
TSC2-214ENST00000488675 SCN7AQ01118 1682 aa22.14■■□□□ 1.13
TSC2-214ENST00000488675 SCN4AP35499 1836 aa22.13■■□□□ 1.13
TSC2-214ENST00000488675 RARSP54136 660 aaKnown RBP22.13■■□□□ 1.13
TSC2-214ENST00000488675 ST5P78524 1137 aa22.13■■□□□ 1.13
TSC2-214ENST00000488675 C7orf43Q8WVR3 580 aa22.13■■□□□ 1.13
TSC2-214ENST00000488675 NECTIN2Q92692 538 aa22.13■■□□□ 1.13
TSC2-214ENST00000488675 ABHD8Q96I13 439 aa22.13■■□□□ 1.13
TSC2-214ENST00000488675 HYPKQ9NX55 129 aa22.13■■□□□ 1.13
TSC2-214ENST00000488675 SLX4Q8IY92 1834 aa22.13■■□□□ 1.13
TSC2-214ENST00000488675 RASSF10A6NK89 507 aa22.12■■□□□ 1.13
TSC2-214ENST00000488675 BRPF1P55201 1214 aaPredicted RBP22.12■■□□□ 1.13
TSC2-214ENST00000488675 SSH1Q8WYL5 1049 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms