RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PRDM6Q9NQX0 595 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 ANKIB1Q9P2G1 1089 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 KCNH4Q9UQ05 1017 aa6.7□□□□□ -1.34
CD46-215ENST00000488596 PALM3A6NDB9 673 aaPredicted RBP6.69□□□□□ -1.34
CD46-215ENST00000488596 M0R2N6 131 aa6.69□□□□□ -1.34
CD46-215ENST00000488596 UBTFP17480 764 aaKnown RBP6.69□□□□□ -1.34
CD46-215ENST00000488596 GRIK4Q16099 956 aa6.69□□□□□ -1.34
CD46-215ENST00000488596 SIX5Q8N196 739 aa6.69□□□□□ -1.34
CD46-215ENST00000488596 ZNF594Q96JF6 807 aaPredicted RBP6.69□□□□□ -1.34
CD46-215ENST00000488596 TPSG1Q9NRR2 321 aa6.69□□□□□ -1.34
CD46-215ENST00000488596 PPP1R12BO60237 982 aaPredicted RBP6.68□□□□□ -1.34
CD46-215ENST00000488596 NEUROD1Q13562 356 aa6.68□□□□□ -1.34
CD46-215ENST00000488596 C14orf37Q86TY3 774 aa6.68□□□□□ -1.34
CD46-215ENST00000488596 ALDH16A1Q8IZ83 802 aa6.68□□□□□ -1.34
CD46-215ENST00000488596 BHMTQ93088 406 aa6.68□□□□□ -1.34
CD46-215ENST00000488596 CHMP3Q9Y3E7 222 aa6.68□□□□□ -1.34
CD46-215ENST00000488596 APBA3O96018 575 aa6.67□□□□□ -1.34
CD46-215ENST00000488596 FLIIQ13045 1269 aa6.67□□□□□ -1.34
CD46-215ENST00000488596 TRIM28Q13263 835 aaKnown RBP6.67□□□□□ -1.34
CD46-215ENST00000488596 LRP8Q14114 963 aa6.67□□□□□ -1.34
CD46-215ENST00000488596 ATAD2Q6PL18 1390 aa6.67□□□□□ -1.34
CD46-215ENST00000488596 PRSS36Q5K4E3 855 aa6.66□□□□□ -1.34
CD46-215ENST00000488596 BTLAQ7Z6A9 289 aa6.66□□□□□ -1.34
CD46-215ENST00000488596 C2orf49Q9BVC5 232 aaPredicted RBP6.66□□□□□ -1.34
CD46-215ENST00000488596 TRAPPC3LQ5T215 181 aa6.65□□□□□ -1.34
CD46-215ENST00000488596 STAG2Q8N3U4 1231 aa6.65□□□□□ -1.34
CD46-215ENST00000488596 CHMP7Q8WUX9 453 aaPredicted RBP6.65□□□□□ -1.34
CD46-215ENST00000488596 SCG3Q8WXD2 468 aaKnown RBP6.65□□□□□ -1.34
CD46-215ENST00000488596 IGFLR1Q9H665 355 aa6.65□□□□□ -1.34
CD46-215ENST00000488596 TFIP11Q9UBB9 837 aaKnown RBP6.65□□□□□ -1.34
CD46-215ENST00000488596 LILRB5O75023 590 aa6.64□□□□□ -1.35
CD46-215ENST00000488596 LGR5O75473 907 aa6.64□□□□□ -1.35
CD46-215ENST00000488596 RASA1P20936 1047 aa6.64□□□□□ -1.35
CD46-215ENST00000488596 TBC1D8BQ0IIM8 1120 aa6.64□□□□□ -1.35
CD46-215ENST00000488596 GAS2L2Q8NHY3 880 aa6.64□□□□□ -1.35
CD46-215ENST00000488596 NGLY1Q96IV0 654 aa6.64□□□□□ -1.35
CD46-215ENST00000488596 NACC1Q96RE7 527 aa6.64□□□□□ -1.35
CD46-215ENST00000488596 UBE2OQ9C0C9 1292 aaKnown RBP6.64□□□□□ -1.35
CD46-215ENST00000488596 SELPP16109 830 aa6.63□□□□□ -1.35
CD46-215ENST00000488596 NUDT8Q8WV74 236 aa6.63□□□□□ -1.35
CD46-215ENST00000488596 GSX2Q9BZM3 304 aa6.63□□□□□ -1.35
CD46-215ENST00000488596 SLC6A14Q9UN76 642 aa6.63□□□□□ -1.35
CD46-215ENST00000488596 BCS1LQ9Y276 419 aa6.63□□□□□ -1.35
CD46-215ENST00000488596 RBM19Q9Y4C8 960 aaKnown RBP6.63□□□□□ -1.35
CD46-215ENST00000488596 A0A0A0MRY4 1105 aa6.62□□□□□ -1.35
CD46-215ENST00000488596 H2AFB1P0C5Y9 115 aa6.62□□□□□ -1.35
CD46-215ENST00000488596 H2AFB2P0C5Z0 115 aa6.62□□□□□ -1.35
CD46-215ENST00000488596 SEC13P55735 322 aa6.62□□□□□ -1.35
CD46-215ENST00000488596 FNBP4Q8N3X1 1017 aaPredicted RBP6.62□□□□□ -1.35
CD46-215ENST00000488596 GLMNQ92990 594 aa6.62□□□□□ -1.35
CD46-215ENST00000488596 CLUAP1Q96AJ1 413 aa6.62□□□□□ -1.35
CD46-215ENST00000488596 JPH1Q9HDC5 661 aaPredicted RBP6.62□□□□□ -1.35
CD46-215ENST00000488596 DMGDHQ9UI17 866 aaKnown RBP6.62□□□□□ -1.35
CD46-215ENST00000488596 MAFBQ9Y5Q3 323 aaPredicted RBP6.62□□□□□ -1.35
CD46-215ENST00000488596 GRNP28799 593 aaKnown RBP6.61□□□□□ -1.35
CD46-215ENST00000488596 AFF1P51825 1210 aaKnown RBP6.61□□□□□ -1.35
CD46-215ENST00000488596 ADGRE1Q14246 886 aa6.61□□□□□ -1.35
CD46-215ENST00000488596 CRTC2Q53ET0 693 aaPredicted RBP6.61□□□□□ -1.35
CD46-215ENST00000488596 SHISA2Q6UWI4 295 aa6.61□□□□□ -1.35
CD46-215ENST00000488596 ILDR2Q71H61 639 aa6.61□□□□□ -1.35
CD46-215ENST00000488596 DNAJB12Q9NXW2 375 aaKnown RBP6.61□□□□□ -1.35
CD46-215ENST00000488596 C9orf172C9J069 976 aa6.6□□□□□ -1.35
CD46-215ENST00000488596 HYAL3O43820 417 aaPredicted RBP6.6□□□□□ -1.35
CD46-215ENST00000488596 MBTPS1Q14703 1052 aa6.6□□□□□ -1.35
CD46-215ENST00000488596 HINFPQ9BQA5 517 aa6.6□□□□□ -1.35
CD46-215ENST00000488596 NAGPAQ9UK23 515 aa6.6□□□□□ -1.35
CD46-215ENST00000488596 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.6□□□□□ -1.35
CD46-215ENST00000488596 ELNP15502 786 aa6.59□□□□□ -1.35
CD46-215ENST00000488596 NFKB1P19838 968 aa6.59□□□□□ -1.35
CD46-215ENST00000488596 PTK7Q13308 1070 aa6.59□□□□□ -1.35
CD46-215ENST00000488596 CCINQ13939 588 aa6.59□□□□□ -1.35
CD46-215ENST00000488596 HIF1AQ16665 826 aa6.59□□□□□ -1.35
CD46-215ENST00000488596 RTN1Q16799 776 aa6.59□□□□□ -1.35
CD46-215ENST00000488596 KANK4Q5T7N3 995 aaPredicted RBP6.59□□□□□ -1.35
CD46-215ENST00000488596 IER5Q5VY09 327 aa6.59□□□□□ -1.35
CD46-215ENST00000488596 PSAPL1Q6NUJ1 521 aa6.59□□□□□ -1.35
CD46-215ENST00000488596 ERICH6Q7L0X2 663 aa6.59□□□□□ -1.35
CD46-215ENST00000488596 DMRTC2Q8IXT2 367 aaPredicted RBP6.59□□□□□ -1.35
CD46-215ENST00000488596 LENG1Q96BZ8 264 aaPredicted RBP6.59□□□□□ -1.35
CD46-215ENST00000488596 EFCC1Q9HA90 598 aa6.59□□□□□ -1.35
CD46-215ENST00000488596 TGFBR3LH3BV60 316 aa6.58□□□□□ -1.36
CD46-215ENST00000488596 DPYDQ12882 1025 aa6.58□□□□□ -1.36
CD46-215ENST00000488596 LARP1Q6PKG0 1096 aaKnown RBP6.58□□□□□ -1.36
CD46-215ENST00000488596 PNMA5Q96PV4 448 aa6.58□□□□□ -1.36
CD46-215ENST00000488596 KLK14Q9P0G3 267 aa6.58□□□□□ -1.36
CD46-215ENST00000488596 INPP5BP32019 993 aa6.57□□□□□ -1.36
CD46-215ENST00000488596 TXNRD3Q86VQ6 643 aa6.57□□□□□ -1.36
CD46-215ENST00000488596 PROSER2Q86WR7 435 aaPredicted RBP6.57□□□□□ -1.36
CD46-215ENST00000488596 PPP1R12CQ9BZL4 782 aa6.57□□□□□ -1.36
CD46-215ENST00000488596 ZFATQ9P243 1243 aa6.57□□□□□ -1.36
CD46-215ENST00000488596 ZBTB42B2RXF5 422 aa6.56□□□□□ -1.36
CD46-215ENST00000488596 RGS9O75916 674 aaPredicted RBP6.56□□□□□ -1.36
CD46-215ENST00000488596 IGFBP4P22692 258 aa6.56□□□□□ -1.36
CD46-215ENST00000488596 RAC1P63000 192 aa6.56□□□□□ -1.36
CD46-215ENST00000488596 PLAURQ03405 335 aa6.56□□□□□ -1.36
CD46-215ENST00000488596 MCTP1Q6DN14 999 aa6.56□□□□□ -1.36
CD46-215ENST00000488596 FAM35AQ86V20 835 aa6.56□□□□□ -1.36
CD46-215ENST00000488596 FMR1NBQ8N0W7 255 aaPredicted RBP6.56□□□□□ -1.36
CD46-215ENST00000488596 ZMYND15Q9H091 742 aa6.56□□□□□ -1.36
CD46-215ENST00000488596 USP17L15C9J2P7 530 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms