RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 XAGE3Q8WTP9 111 aa30.06■■■□□ 2.4
CUL4A-209ENST00000488558 HOXA10P31260 410 aaPredicted RBP30.05■■■□□ 2.4
CUL4A-209ENST00000488558 GNAI1P63096 354 aa30.05■■■□□ 2.4
CUL4A-209ENST00000488558 RRAGCQ9HB90 399 aa30.05■■■□□ 2.4
CUL4A-209ENST00000488558 CHPF2Q9P2E5 772 aa30.05■■■□□ 2.4
CUL4A-209ENST00000488558 DBF4Q9UBU7 674 aaPredicted RBP30.04■■■□□ 2.4
CUL4A-209ENST00000488558 SNED1Q8TER0 1413 aa30.04■■■□□ 2.4
CUL4A-209ENST00000488558 RTKN2Q8IZC4 609 aa30.03■■■□□ 2.4
CUL4A-209ENST00000488558 FKBP4Q02790 459 aaKnown RBP eCLIP30.02■■■□□ 2.4
CUL4A-209ENST00000488558 AIMP1Q12904 312 aaKnown RBP30.02■■■□□ 2.4
CUL4A-209ENST00000488558 DUSP27Q5VZP5 1158 aa30.02■■■□□ 2.4
CUL4A-209ENST00000488558 DPY19L2Q6NUT2 758 aa30.02■■■□□ 2.4
CUL4A-209ENST00000488558 RPGRQ92834 1020 aaKnown RBP30.02■■■□□ 2.4
CUL4A-209ENST00000488558 UTP14AQ9BVJ6 771 aaKnown RBP30.02■■■□□ 2.4
CUL4A-209ENST00000488558 FSTL1Q12841 308 aa30.01■■■□□ 2.39
CUL4A-209ENST00000488558 CCDC184Q52MB2 194 aa30.01■■■□□ 2.39
CUL4A-209ENST00000488558 SLC10A5Q5PT55 438 aa30.01■■■□□ 2.39
CUL4A-209ENST00000488558 CEP350Q5VT06 3117 aa30■■■□□ 2.39
CUL4A-209ENST00000488558 VEGFAP15692 232 aaPredicted RBP30■■■□□ 2.39
CUL4A-209ENST00000488558 CC2D2BQ6DHV5 1058 aa30■■■□□ 2.39
CUL4A-209ENST00000488558 LAMB2P55268 1798 aa30■■■□□ 2.39
CUL4A-209ENST00000488558 TCIRG1Q13488 830 aa29.99■■■□□ 2.39
CUL4A-209ENST00000488558 NLRP10Q86W26 655 aa29.99■■■□□ 2.39
CUL4A-209ENST00000488558 CRAMP1Q96RY5 1269 aa29.99■■■□□ 2.39
CUL4A-209ENST00000488558 HYPKQ9NX55 129 aa29.99■■■□□ 2.39
CUL4A-209ENST00000488558 PLBD2Q8NHP8 589 aa29.98■■■□□ 2.39
CUL4A-209ENST00000488558 APLP1P51693 650 aa29.97■■■□□ 2.39
CUL4A-209ENST00000488558 GRIPAP1Q4V328 841 aa29.97■■■□□ 2.39
CUL4A-209ENST00000488558 RBM17Q96I25 401 aaKnown RBP29.97■■■□□ 2.39
CUL4A-209ENST00000488558 NLRP3Q96P20 1036 aa29.97■■■□□ 2.39
CUL4A-209ENST00000488558 ANP32CO43423 234 aa29.96■■■□□ 2.39
CUL4A-209ENST00000488558 CCDC27Q2M243 656 aa29.96■■■□□ 2.39
CUL4A-209ENST00000488558 OLFM4Q6UX06 510 aa29.96■■■□□ 2.39
CUL4A-209ENST00000488558 PSMD1Q99460 953 aa29.96■■■□□ 2.39
CUL4A-209ENST00000488558 NCBP3Q53F19 620 aaKnown RBP29.95■■■□□ 2.39
CUL4A-209ENST00000488558 ANKRD13DQ6ZTN6 518 aa29.95■■■□□ 2.39
CUL4A-209ENST00000488558 C3orf67Q6ZVT6 689 aa29.94■■■□□ 2.38
CUL4A-209ENST00000488558 SMC1BQ8NDV3 1235 aa29.94■■■□□ 2.38
CUL4A-209ENST00000488558 CHMP4AQ9BY43 222 aa29.93■■■□□ 2.38
CUL4A-209ENST00000488558 MRS2Q9HD23 443 aa29.93■■■□□ 2.38
CUL4A-209ENST00000488558 SH3TC1Q8TE82 1336 aa29.93■■■□□ 2.38
CUL4A-209ENST00000488558 POTECB2RU33 542 aa29.92■■■□□ 2.38
CUL4A-209ENST00000488558 DDX60Q8IY21 1712 aaKnown RBP29.92■■■□□ 2.38
CUL4A-209ENST00000488558 ZNF277Q9NRM2 450 aaPredicted RBP29.92■■■□□ 2.38
CUL4A-209ENST00000488558 PPEF1O14829 653 aaPredicted RBP29.91■■■□□ 2.38
CUL4A-209ENST00000488558 IARSP41252 1262 aaKnown RBP29.91■■■□□ 2.38
CUL4A-209ENST00000488558 ISCA1Q9BUE6 129 aa29.91■■■□□ 2.38
CUL4A-209ENST00000488558 TRMT112Q9UI30 125 aaKnown RBP29.91■■■□□ 2.38
CUL4A-209ENST00000488558 SCN4AP35499 1836 aa29.91■■■□□ 2.38
CUL4A-209ENST00000488558 SYNE4Q8N205 404 aa29.9■■■□□ 2.38
CUL4A-209ENST00000488558 C8orf58Q8NAV2 365 aa29.88■■■□□ 2.37
CUL4A-209ENST00000488558 L3MBTL3Q96JM7 780 aaPredicted RBP29.88■■■□□ 2.37
CUL4A-209ENST00000488558 ABCC4O15439 1325 aa29.88■■■□□ 2.37
CUL4A-209ENST00000488558 DDNO94850 711 aaPredicted RBP29.87■■■□□ 2.37
CUL4A-209ENST00000488558 TRIM28Q13263 835 aaKnown RBP29.87■■■□□ 2.37
CUL4A-209ENST00000488558 WWC1Q8IX03 1113 aa29.87■■■□□ 2.37
CUL4A-209ENST00000488558 ELL2O00472 640 aaPredicted RBP29.86■■■□□ 2.37
CUL4A-209ENST00000488558 GOLGA2Q08379 1002 aa29.86■■■□□ 2.37
CUL4A-209ENST00000488558 IL16Q14005 1332 aa29.86■■■□□ 2.37
CUL4A-209ENST00000488558 HCLS1P14317 486 aaPredicted RBP29.85■■■□□ 2.37
CUL4A-209ENST00000488558 ATP6V0A2Q9Y487 856 aa29.85■■■□□ 2.37
CUL4A-209ENST00000488558 IQCA1LA6NCM1 817 aa29.84■■■□□ 2.37
CUL4A-209ENST00000488558 FZD9O00144 591 aa29.84■■■□□ 2.37
CUL4A-209ENST00000488558 CCDC30Q5VVM6 783 aa29.84■■■□□ 2.37
CUL4A-209ENST00000488558 TMX4Q9H1E5 349 aaPredicted RBP29.84■■■□□ 2.37
CUL4A-209ENST00000488558 ZNF541Q9H0D2 1346 aa29.84■■■□□ 2.37
CUL4A-209ENST00000488558 LRRC37AA6NMS7 1700 aa29.83■■■□□ 2.37
CUL4A-209ENST00000488558 BBOX1O75936 387 aa29.83■■■□□ 2.37
CUL4A-209ENST00000488558 COL4A5P29400 1685 aa29.82■■■□□ 2.36
CUL4A-209ENST00000488558 DDX46Q7L014 1031 aaKnown RBP29.82■■■□□ 2.36
CUL4A-209ENST00000488558 RIC3Q7Z5B4 369 aa29.82■■■□□ 2.36
CUL4A-209ENST00000488558 JDP2Q8WYK2 163 aa29.82■■■□□ 2.36
CUL4A-209ENST00000488558 PHAXQ9H814 394 aaKnown RBP29.82■■■□□ 2.36
CUL4A-209ENST00000488558 ATP5J2-PTCD1G3V325 749 aa29.81■■■□□ 2.36
CUL4A-209ENST00000488558 TSR2Q969E8 191 aaKnown RBP29.81■■■□□ 2.36
CUL4A-209ENST00000488558 VPS33BQ9H267 617 aa29.8■■■□□ 2.36
CUL4A-209ENST00000488558 GRAPQ13588 217 aa29.79■■■□□ 2.36
CUL4A-209ENST00000488558 TMC4Q7Z404 712 aa29.79■■■□□ 2.36
CUL4A-209ENST00000488558 SP8Q8IXZ3 490 aa29.79■■■□□ 2.36
CUL4A-209ENST00000488558 DNAJC5GQ8N7S2 189 aa29.79■■■□□ 2.36
CUL4A-209ENST00000488558 TSPYL6Q8N831 410 aa29.79■■■□□ 2.36
CUL4A-209ENST00000488558 GRAPLQ8TC17 118 aaPredicted RBP29.79■■■□□ 2.36
CUL4A-209ENST00000488558 FAM89AQ96GI7 184 aa29.79■■■□□ 2.36
CUL4A-209ENST00000488558 TCERG1O14776 1098 aaKnown RBP29.78■■■□□ 2.36
CUL4A-209ENST00000488558 DDX58O95786 925 aaKnown RBP29.78■■■□□ 2.36
CUL4A-209ENST00000488558 SF3B3Q15393 1217 aaKnown RBP29.78■■■□□ 2.36
CUL4A-209ENST00000488558 SLC51AQ86UW1 340 aa29.78■■■□□ 2.36
CUL4A-209ENST00000488558 GPC2Q8N158 579 aa29.78■■■□□ 2.36
CUL4A-209ENST00000488558 RTFDC1Q9BY42 306 aaPredicted RBP29.78■■■□□ 2.36
CUL4A-209ENST00000488558 TAF1P21675 1872 aa29.77■■■□□ 2.36
CUL4A-209ENST00000488558 SUPT20HQ8NEM7 779 aa29.77■■■□□ 2.36
CUL4A-209ENST00000488558 LARGE2Q8N3Y3 721 aa29.76■■■□□ 2.35
CUL4A-209ENST00000488558 TAF1DQ9H5J8 278 aaPredicted RBP29.76■■■□□ 2.35
CUL4A-209ENST00000488558 ADAMTSL1Q8N6G6 1762 aa29.76■■■□□ 2.35
CUL4A-209ENST00000488558 EIF6P56537 245 aaKnown RBP29.75■■■□□ 2.35
CUL4A-209ENST00000488558 TWISTNBQ3B726 338 aaPredicted RBP29.75■■■□□ 2.35
CUL4A-209ENST00000488558 CHADLQ6NUI6 762 aa29.75■■■□□ 2.35
CUL4A-209ENST00000488558 ZBTB38Q8NAP3 1195 aaPredicted RBP29.75■■■□□ 2.35
CUL4A-209ENST00000488558 CCDC191Q8NCU4 936 aa29.75■■■□□ 2.35
CUL4A-209ENST00000488558 HSP90B1P14625 803 aaKnown RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms