RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ITGB2P05107 769 aa8.01□□□□□ -1.13
ITGB1-214ENST00000488427 BMP4P12644 408 aa8.01□□□□□ -1.13
ITGB1-214ENST00000488427 SF3B2Q13435 895 aaKnown RBP8.01□□□□□ -1.13
ITGB1-214ENST00000488427 BTLAQ7Z6A9 289 aa8.01□□□□□ -1.13
ITGB1-214ENST00000488427 IFT43Q96FT9 208 aa8.01□□□□□ -1.13
ITGB1-214ENST00000488427 ABHD17AQ96GS6 310 aa8.01□□□□□ -1.13
ITGB1-214ENST00000488427 OXCT2Q9BYC2 517 aaPredicted RBP8.01□□□□□ -1.13
ITGB1-214ENST00000488427 BRD7Q9NPI1 651 aa8.01□□□□□ -1.13
ITGB1-214ENST00000488427 STIM2Q9P246 746 aa8.01□□□□□ -1.13
ITGB1-214ENST00000488427 BNIP3LO60238 219 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 MAPTP10636 758 aaKnown RBP8□□□□□ -1.13
ITGB1-214ENST00000488427 PCSK2P16519 638 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 ARSDP51689 593 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 TNP2Q05952 138 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 COX20Q5RI15 118 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 ALKBH2Q6NS38 261 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 HELQQ8TDG4 1101 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 C7orf43Q8WVR3 580 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 HSH2DQ96JZ2 352 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 TRAIPQ9BWF2 469 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 AVENQ9NQS1 362 aaPredicted RBP8□□□□□ -1.13
ITGB1-214ENST00000488427 NDFIP2Q9NV92 336 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 EGFL7Q9UHF1 273 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 PRR12Q9ULL5 1215 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 KCNH4Q9UQ05 1017 aa8□□□□□ -1.13
ITGB1-214ENST00000488427 RPLP1P05386 114 aaKnown RBP7.99□□□□□ -1.13
ITGB1-214ENST00000488427 TYRO3Q06418 890 aa7.99□□□□□ -1.13
ITGB1-214ENST00000488427 TTC16Q8NEE8 873 aa7.99□□□□□ -1.13
ITGB1-214ENST00000488427 KLK14Q9P0G3 267 aa7.99□□□□□ -1.13
ITGB1-214ENST00000488427 GDF2Q9UK05 429 aaPredicted RBP7.99□□□□□ -1.13
ITGB1-214ENST00000488427 EFSO43281 561 aa7.98□□□□□ -1.13
ITGB1-214ENST00000488427 MICAL2O94851 1124 aa7.98□□□□□ -1.13
ITGB1-214ENST00000488427 FAM13AO94988 1023 aa7.98□□□□□ -1.13
ITGB1-214ENST00000488427 KCNQ4P56696 695 aa7.98□□□□□ -1.13
ITGB1-214ENST00000488427 KCNA1Q09470 495 aa7.98□□□□□ -1.13
ITGB1-214ENST00000488427 UBAP2LQ14157 1087 aaKnown RBP7.98□□□□□ -1.13
ITGB1-214ENST00000488427 NAA30Q147X3 362 aaPredicted RBP7.98□□□□□ -1.13
ITGB1-214ENST00000488427 XP32Q5T750 250 aa7.98□□□□□ -1.13
ITGB1-214ENST00000488427 MKL2Q9ULH7 1088 aa7.98□□□□□ -1.13
ITGB1-214ENST00000488427 IDH3AP50213 366 aa7.97□□□□□ -1.13
ITGB1-214ENST00000488427 ALYREFQ86V81 257 aaKnown RBP7.97□□□□□ -1.13
ITGB1-214ENST00000488427 TREML1Q86YW5 311 aa7.97□□□□□ -1.13
ITGB1-214ENST00000488427 GOLGA6L1Q8N7Z2 621 aa7.97□□□□□ -1.13
ITGB1-214ENST00000488427 ZNF280CQ8ND82 737 aa7.97□□□□□ -1.13
ITGB1-214ENST00000488427 GTF3C2Q8WUA4 911 aaPredicted RBP7.97□□□□□ -1.13
ITGB1-214ENST00000488427 PIK3R5Q8WYR1 880 aa7.97□□□□□ -1.13
ITGB1-214ENST00000488427 SLAIN2Q9P270 581 aa7.97□□□□□ -1.13
ITGB1-214ENST00000488427 FNDC3AQ9Y2H6 1198 aaKnown RBP7.97□□□□□ -1.13
ITGB1-214ENST00000488427 K7ELQ4 463 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-214ENST00000488427 ABL1P00519 1130 aa7.96□□□□□ -1.14
ITGB1-214ENST00000488427 THBS1P07996 1170 aa7.96□□□□□ -1.14
ITGB1-214ENST00000488427 SNRPNP63162 240 aaKnown RBP7.96□□□□□ -1.14
ITGB1-214ENST00000488427 PNMA5Q96PV4 448 aa7.96□□□□□ -1.14
ITGB1-214ENST00000488427 RRAGCQ9HB90 399 aa7.96□□□□□ -1.14
ITGB1-214ENST00000488427 SHISA8B8ZZ34 492 aa7.95□□□□□ -1.14
ITGB1-214ENST00000488427 ARAFP10398 606 aa7.95□□□□□ -1.14
ITGB1-214ENST00000488427 ADH6P28332 368 aa7.95□□□□□ -1.14
ITGB1-214ENST00000488427 FKBP4Q02790 459 aaKnown RBP eCLIP7.95□□□□□ -1.14
ITGB1-214ENST00000488427 HOMEZQ8IX15 550 aa7.95□□□□□ -1.14
ITGB1-214ENST00000488427 KLRG1Q96E93 195 aa7.95□□□□□ -1.14
ITGB1-214ENST00000488427 SEPT3Q9UH03 358 aa7.95□□□□□ -1.14
ITGB1-214ENST00000488427 LRFN2Q9ULH4 789 aa7.95□□□□□ -1.14
ITGB1-214ENST00000488427 CD33P20138 364 aa7.94□□□□□ -1.14
ITGB1-214ENST00000488427 SPEM2Q0P670 501 aa7.94□□□□□ -1.14
ITGB1-214ENST00000488427 AAMPQ13685 434 aa7.94□□□□□ -1.14
ITGB1-214ENST00000488427 PCSK7Q16549 785 aa7.94□□□□□ -1.14
ITGB1-214ENST00000488427 NOM1Q5C9Z4 860 aaKnown RBP7.94□□□□□ -1.14
ITGB1-214ENST00000488427 GLYCTKQ8IVS8 523 aa7.94□□□□□ -1.14
ITGB1-214ENST00000488427 SAP130Q9H0E3 1048 aa7.94□□□□□ -1.14
ITGB1-214ENST00000488427 KRBA1A5PL33 1030 aa7.93□□□□□ -1.14
ITGB1-214ENST00000488427 CARNS1A5YM72 827 aa7.93□□□□□ -1.14
ITGB1-214ENST00000488427 INPP5BP32019 993 aa7.93□□□□□ -1.14
ITGB1-214ENST00000488427 USP5P45974 858 aa7.93□□□□□ -1.14
ITGB1-214ENST00000488427 BAG6P46379 1132 aa7.93□□□□□ -1.14
ITGB1-214ENST00000488427 ZNF468Q5VIY5 522 aaPredicted RBP7.93□□□□□ -1.14
ITGB1-214ENST00000488427 PHLDB3Q6NSJ2 640 aa7.93□□□□□ -1.14
ITGB1-214ENST00000488427 EDARADDQ8WWZ3 215 aa7.93□□□□□ -1.14
ITGB1-214ENST00000488427 GNEQ9Y223 722 aaKnown RBP7.93□□□□□ -1.14
ITGB1-214ENST00000488427 TNFRSF10BO14763 440 aa7.92□□□□□ -1.14
ITGB1-214ENST00000488427 ZAP70P43403 619 aa7.92□□□□□ -1.14
ITGB1-214ENST00000488427 CCINQ13939 588 aa7.92□□□□□ -1.14
ITGB1-214ENST00000488427 DMGDHQ9UI17 866 aaKnown RBP7.92□□□□□ -1.14
ITGB1-214ENST00000488427 BCS1LQ9Y276 419 aa7.92□□□□□ -1.14
ITGB1-214ENST00000488427 PIK3R2O00459 728 aa7.91□□□□□ -1.14
ITGB1-214ENST00000488427 AMPD1P23109 780 aa7.91□□□□□ -1.14
ITGB1-214ENST00000488427 CTBSQ01459 385 aa7.91□□□□□ -1.14
ITGB1-214ENST00000488427 SFSWAPQ12872 951 aaKnown RBP7.91□□□□□ -1.14
ITGB1-214ENST00000488427 SLCO4C1Q6ZQN7 724 aa7.91□□□□□ -1.14
ITGB1-214ENST00000488427 C1orf229Q6ZS94 237 aaPredicted RBP7.91□□□□□ -1.14
ITGB1-214ENST00000488427 CAPN12Q6ZSI9 719 aa7.91□□□□□ -1.14
ITGB1-214ENST00000488427 TXNDC2Q86VQ3 553 aa7.91□□□□□ -1.14
ITGB1-214ENST00000488427 RGL4Q8IZJ4 473 aa7.91□□□□□ -1.14
ITGB1-214ENST00000488427 RTCBQ9Y3I0 505 aaKnown RBP7.91□□□□□ -1.14
ITGB1-214ENST00000488427 H3BRB1 525 aa7.9□□□□□ -1.14
ITGB1-214ENST00000488427 ICMTO60725 284 aa7.9□□□□□ -1.14
ITGB1-214ENST00000488427 SIN3BO75182 1162 aa7.9□□□□□ -1.14
ITGB1-214ENST00000488427 NPR3P17342 541 aa7.9□□□□□ -1.14
ITGB1-214ENST00000488427 ALAS2P22557 587 aa7.9□□□□□ -1.14
ITGB1-214ENST00000488427 COL8A1P27658 744 aa7.9□□□□□ -1.14
ITGB1-214ENST00000488427 EHHADHQ08426 723 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms