RNA–Protein interactions for RNA: ENST00000488363.1

MMP11-210, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-210ENST00000488363 APAF1O14727 1248 aa23.64■■□□□ 1.37
MMP11-210ENST00000488363 ZEB1P37275 1124 aaPredicted RBP23.64■■□□□ 1.37
MMP11-210ENST00000488363 POTECB2RU33 542 aa23.63■■□□□ 1.37
MMP11-210ENST00000488363 HOXB7P09629 217 aa23.63■■□□□ 1.37
MMP11-210ENST00000488363 HOXA10P31260 410 aaPredicted RBP23.63■■□□□ 1.37
MMP11-210ENST00000488363 HSP90AB3PQ58FF7 597 aa23.63■■□□□ 1.37
MMP11-210ENST00000488363 HDGFL1Q5TGJ6 251 aa23.63■■□□□ 1.37
MMP11-210ENST00000488363 WDR90Q96KV7 1748 aa23.63■■□□□ 1.37
MMP11-210ENST00000488363 UTP14AQ9BVJ6 771 aaKnown RBP23.63■■□□□ 1.37
MMP11-210ENST00000488363 ZNF277Q9NRM2 450 aaPredicted RBP23.63■■□□□ 1.37
MMP11-210ENST00000488363 CHPF2Q9P2E5 772 aa23.63■■□□□ 1.37
MMP11-210ENST00000488363 RBM17Q96I25 401 aaKnown RBP23.62■■□□□ 1.37
MMP11-210ENST00000488363 MBIPQ9NS73 344 aa23.61■■□□□ 1.37
MMP11-210ENST00000488363 DDNO94850 711 aaPredicted RBP23.6■■□□□ 1.37
MMP11-210ENST00000488363 C3orf67Q6ZVT6 689 aa23.6■■□□□ 1.37
MMP11-210ENST00000488363 SYNE4Q8N205 404 aa23.6■■□□□ 1.37
MMP11-210ENST00000488363 NLRP3Q96P20 1036 aa23.6■■□□□ 1.37
MMP11-210ENST00000488363 CRAMP1Q96RY5 1269 aa23.6■■□□□ 1.37
MMP11-210ENST00000488363 ZNF853P0CG23 659 aa23.59■■□□□ 1.37
MMP11-210ENST00000488363 CALD1Q05682 793 aaKnown RBP23.59■■□□□ 1.37
MMP11-210ENST00000488363 TCIRG1Q13488 830 aa23.59■■□□□ 1.37
MMP11-210ENST00000488363 SLC10A5Q5PT55 438 aa23.59■■□□□ 1.37
MMP11-210ENST00000488363 DUSP27Q5VZP5 1158 aa23.59■■□□□ 1.37
MMP11-210ENST00000488363 CC2D2BQ6DHV5 1058 aa23.59■■□□□ 1.37
MMP11-210ENST00000488363 NLRP10Q86W26 655 aa23.59■■□□□ 1.37
MMP11-210ENST00000488363 RNF123Q5XPI4 1314 aa23.59■■□□□ 1.37
MMP11-210ENST00000488363 IARSP41252 1262 aaKnown RBP23.58■■□□□ 1.37
MMP11-210ENST00000488363 DNAJC5GQ8N7S2 189 aa23.58■■□□□ 1.37
MMP11-210ENST00000488363 PSMD1Q99460 953 aa23.58■■□□□ 1.37
MMP11-210ENST00000488363 IFT57Q9NWB7 429 aa23.58■■□□□ 1.37
MMP11-210ENST00000488363 DBF4Q9UBU7 674 aaPredicted RBP23.58■■□□□ 1.37
MMP11-210ENST00000488363 ANKRD36CQ5JPF3 1778 aa23.57■■□□□ 1.36
MMP11-210ENST00000488363 SNED1Q8TER0 1413 aa23.57■■□□□ 1.36
MMP11-210ENST00000488363 PPEF1O14829 653 aaPredicted RBP23.56■■□□□ 1.36
MMP11-210ENST00000488363 GNAI1P63096 354 aa23.56■■□□□ 1.36
MMP11-210ENST00000488363 HTRA3P83110 453 aa23.56■■□□□ 1.36
MMP11-210ENST00000488363 GRIPAP1Q4V328 841 aa23.55■■□□□ 1.36
MMP11-210ENST00000488363 PLBD2Q8NHP8 589 aa23.55■■□□□ 1.36
MMP11-210ENST00000488363 HYPKQ9NX55 129 aa23.55■■□□□ 1.36
MMP11-210ENST00000488363 TRMT112Q9UI30 125 aaKnown RBP23.55■■□□□ 1.36
MMP11-210ENST00000488363 TCERG1O14776 1098 aaKnown RBP23.54■■□□□ 1.36
MMP11-210ENST00000488363 HCLS1P14317 486 aaPredicted RBP23.54■■□□□ 1.36
MMP11-210ENST00000488363 CCDC184Q52MB2 194 aa23.54■■□□□ 1.36
MMP11-210ENST00000488363 ANKRD13DQ6ZTN6 518 aa23.54■■□□□ 1.36
MMP11-210ENST00000488363 L3MBTL3Q96JM7 780 aaPredicted RBP23.54■■□□□ 1.36
MMP11-210ENST00000488363 ZNF541Q9H0D2 1346 aa23.54■■□□□ 1.36
MMP11-210ENST00000488363 IQCA1LA6NCM1 817 aa23.53■■□□□ 1.36
MMP11-210ENST00000488363 SH3TC1Q8TE82 1336 aa23.53■■□□□ 1.36
MMP11-210ENST00000488363 FZD9O00144 591 aa23.52■■□□□ 1.36
MMP11-210ENST00000488363 SLC51AQ86UW1 340 aa23.52■■□□□ 1.36
MMP11-210ENST00000488363 JDP2Q8WYK2 163 aa23.52■■□□□ 1.36
MMP11-210ENST00000488363 TMX4Q9H1E5 349 aaPredicted RBP23.52■■□□□ 1.36
MMP11-210ENST00000488363 ABCC4O15439 1325 aa23.51■■□□□ 1.35
MMP11-210ENST00000488363 ELL2O00472 640 aaPredicted RBP23.5■■□□□ 1.35
MMP11-210ENST00000488363 ZNF428Q96B54 188 aa23.5■■□□□ 1.35
MMP11-210ENST00000488363 KLRG1Q96E93 195 aa23.5■■□□□ 1.35
MMP11-210ENST00000488363 ISCA1Q9BUE6 129 aa23.5■■□□□ 1.35
MMP11-210ENST00000488363 ATP6V0A2Q9Y487 856 aa23.5■■□□□ 1.35
MMP11-210ENST00000488363 ZNF316A6NFI3 1004 aaPredicted RBP23.49■■□□□ 1.35
MMP11-210ENST00000488363 POTEIP0CG38 1075 aa23.49■■□□□ 1.35
MMP11-210ENST00000488363 POTEJP0CG39 1038 aa23.49■■□□□ 1.35
MMP11-210ENST00000488363 CHADLQ6NUI6 762 aa23.49■■□□□ 1.35
MMP11-210ENST00000488363 TAF1DQ9H5J8 278 aaPredicted RBP23.49■■□□□ 1.35
MMP11-210ENST00000488363 SCN4AP35499 1836 aa23.48■■□□□ 1.35
MMP11-210ENST00000488363 ATP5J2-PTCD1G3V325 749 aa23.48■■□□□ 1.35
MMP11-210ENST00000488363 BBOX1O75936 387 aa23.48■■□□□ 1.35
MMP11-210ENST00000488363 DDX46Q7L014 1031 aaKnown RBP23.48■■□□□ 1.35
MMP11-210ENST00000488363 LARGE2Q8N3Y3 721 aa23.48■■□□□ 1.35
MMP11-210ENST00000488363 EIF6P56537 245 aaKnown RBP23.47■■□□□ 1.35
MMP11-210ENST00000488363 GOLGA2Q08379 1002 aa23.47■■□□□ 1.35
MMP11-210ENST00000488363 GPC2Q8N158 579 aa23.47■■□□□ 1.35
MMP11-210ENST00000488363 C8orf58Q8NAV2 365 aa23.47■■□□□ 1.35
MMP11-210ENST00000488363 HACL1Q9UJ83 578 aa23.47■■□□□ 1.35
MMP11-210ENST00000488363 LAMB2P55268 1798 aa23.47■■□□□ 1.35
MMP11-210ENST00000488363 COL4A5P29400 1685 aa23.46■■□□□ 1.35
MMP11-210ENST00000488363 RIC3Q7Z5B4 369 aa23.46■■□□□ 1.35
MMP11-210ENST00000488363 LDHDQ86WU2 507 aa23.46■■□□□ 1.35
MMP11-210ENST00000488363 FAM89AQ96GI7 184 aa23.46■■□□□ 1.35
MMP11-210ENST00000488363 PHAXQ9H814 394 aaKnown RBP23.46■■□□□ 1.35
MMP11-210ENST00000488363 ANP32CO43423 234 aa23.45■■□□□ 1.34
MMP11-210ENST00000488363 TRIM28Q13263 835 aaKnown RBP23.45■■□□□ 1.34
MMP11-210ENST00000488363 GRAPQ13588 217 aa23.45■■□□□ 1.34
MMP11-210ENST00000488363 SP8Q8IXZ3 490 aa23.45■■□□□ 1.34
MMP11-210ENST00000488363 GRAPLQ8TC17 118 aaPredicted RBP23.45■■□□□ 1.34
MMP11-210ENST00000488363 CHMP4AQ9BY43 222 aa23.45■■□□□ 1.34
MMP11-210ENST00000488363 PPIP5K2O43314 1243 aa23.44■■□□□ 1.34
MMP11-210ENST00000488363 CCDC27Q2M243 656 aa23.44■■□□□ 1.34
MMP11-210ENST00000488363 EAPPQ56P03 285 aaPredicted RBP23.44■■□□□ 1.34
MMP11-210ENST00000488363 MRS2Q9HD23 443 aa23.44■■□□□ 1.34
MMP11-210ENST00000488363 GJA3Q9Y6H8 435 aa23.44■■□□□ 1.34
MMP11-210ENST00000488363 EPHX2P34913 555 aa23.43■■□□□ 1.34
MMP11-210ENST00000488363 CCDC30Q5VVM6 783 aa23.43■■□□□ 1.34
MMP11-210ENST00000488363 DPP8Q6V1X1 898 aaPredicted RBP23.43■■□□□ 1.34
MMP11-210ENST00000488363 NIM1KQ8IY84 436 aa23.43■■□□□ 1.34
MMP11-210ENST00000488363 SUPT20HQ8NEM7 779 aa23.43■■□□□ 1.34
MMP11-210ENST00000488363 VPS33BQ9H267 617 aa23.43■■□□□ 1.34
MMP11-210ENST00000488363 AOC3Q16853 763 aa23.42■■□□□ 1.34
MMP11-210ENST00000488363 RTL5Q5HYW3 569 aaPredicted RBP23.42■■□□□ 1.34
MMP11-210ENST00000488363 WWC1Q8IX03 1113 aa23.42■■□□□ 1.34
MMP11-210ENST00000488363 JMYQ8N9B5 988 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms