RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 PRPF38AQ8NAV1 312 aaKnown RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 LARP6Q9BRS8 491 aaKnown RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 ADGBQ8N7X0 1667 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 CEP135Q66GS9 1140 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 TLDC1Q6P9B6 456 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 MICALL1Q8N3F8 863 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 PLEKHG4BQ96PX9 1271 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 LZTS2Q9BRK4 669 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 U2SURPO15042 1029 aaKnown RBP7.43□□□□□ -1.22
SIK3-212ENST00000488337 KIF3BO15066 747 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 AP1G2O75843 785 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 SLU7O95391 586 aaKnown RBP7.43□□□□□ -1.22
SIK3-212ENST00000488337 DZIP1LQ8IYY4 767 aaKnown RBP7.43□□□□□ -1.22
SIK3-212ENST00000488337 PROCA1Q8NCQ7 364 aaPredicted RBP7.43□□□□□ -1.22
SIK3-212ENST00000488337 CCDC97Q96F63 343 aaPredicted RBP7.43□□□□□ -1.22
SIK3-212ENST00000488337 PDRG1Q9NUG6 133 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 DNAAF4Q8WXU2 420 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 AK7Q96M32 723 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 UTP14AQ9BVJ6 771 aaKnown RBP7.43□□□□□ -1.22
SIK3-212ENST00000488337 EID1Q9Y6B2 187 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 PIK3C2GO75747 1445 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 PRPHP41219 470 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 ZRSR2Q15696 482 aaKnown RBP7.43□□□□□ -1.22
SIK3-212ENST00000488337 ERC1Q8IUD2 1116 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 TMEM87AQ8NBN3 555 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 LRRN4CLQ8ND94 238 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 TMX3Q96JJ7 454 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 CHCHD3Q9NX63 227 aaKnown RBP7.43□□□□□ -1.22
SIK3-212ENST00000488337 ADCY10Q96PN6 1610 aa7.43□□□□□ -1.22
SIK3-212ENST00000488337 POLR3GO15318 223 aaPredicted RBP7.42□□□□□ -1.22
SIK3-212ENST00000488337 ARMC2Q8NEN0 867 aa7.42□□□□□ -1.22
SIK3-212ENST00000488337 CDC42BPAQ5VT25 1732 aa7.42□□□□□ -1.22
SIK3-212ENST00000488337 HDGFL1Q5TGJ6 251 aa7.42□□□□□ -1.22
SIK3-212ENST00000488337 CTCFLQ8NI51 663 aaPredicted RBP7.42□□□□□ -1.22
SIK3-212ENST00000488337 ZKSCAN4Q969J2 545 aaPredicted RBP7.42□□□□□ -1.22
SIK3-212ENST00000488337 LAMC1P11047 1609 aa7.42□□□□□ -1.22
SIK3-212ENST00000488337 HTATSF1O43719 755 aaKnown RBP7.42□□□□□ -1.22
SIK3-212ENST00000488337 PTGS1P23219 599 aa7.42□□□□□ -1.22
SIK3-212ENST00000488337 MTHFSP49914 203 aa7.42□□□□□ -1.22
SIK3-212ENST00000488337 PSMD2Q13200 908 aa7.42□□□□□ -1.22
SIK3-212ENST00000488337 SMC1AQ14683 1233 aaKnown RBP7.42□□□□□ -1.22
SIK3-212ENST00000488337 WDR63Q8IWG1 891 aa7.42□□□□□ -1.22
SIK3-212ENST00000488337 RBM42Q9BTD8 480 aaKnown RBP7.42□□□□□ -1.22
SIK3-212ENST00000488337 USP26Q9BXU7 913 aa7.42□□□□□ -1.22
SIK3-212ENST00000488337 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.42□□□□□ -1.22
SIK3-212ENST00000488337 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.42□□□□□ -1.22
SIK3-212ENST00000488337 MAGI2Q86UL8 1455 aa7.42□□□□□ -1.22
SIK3-212ENST00000488337 H3BQF6 201 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 MAP2K7O14733 419 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 ZSCAN25Q6NSZ9 544 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 THUMPD2Q9BTF0 503 aaKnown RBP7.41□□□□□ -1.22
SIK3-212ENST00000488337 ORC3Q9UBD5 711 aaPredicted RBP7.41□□□□□ -1.22
SIK3-212ENST00000488337 ARHGAP5Q13017 1502 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 ASXL1Q8IXJ9 1541 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 TTLL5Q6EMB2 1281 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 DDX19BQ9UMR2 479 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 CCDC171Q6TFL3 1326 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 ATAD2Q6PL18 1390 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 OATP04181 439 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 FNTAP49354 379 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 EIF5P55010 431 aaKnown RBP7.41□□□□□ -1.22
SIK3-212ENST00000488337 GNAI1P63096 354 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 ZRSR1Q15695 479 aaKnown RBP7.41□□□□□ -1.22
SIK3-212ENST00000488337 ERCC6LQ2NKX8 1250 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 CHAMP1Q96JM3 812 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 ARPC5LQ9BPX5 153 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 SPATS2LQ9NUQ6 558 aaKnown RBP7.41□□□□□ -1.22
SIK3-212ENST00000488337 MVPQ14764 893 aaKnown RBP7.41□□□□□ -1.22
SIK3-212ENST00000488337 NFXL1Q6ZNB6 911 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 PARD3BQ8TEW8 1205 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 KCNN1Q92952 543 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 FUT8Q9BYC5 575 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 CLIP2Q9UDT6 1046 aa7.41□□□□□ -1.22
SIK3-212ENST00000488337 MSH6P52701 1360 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 SETD1BQ9UPS6 1966 aaKnown RBP7.4□□□□□ -1.22
SIK3-212ENST00000488337 RLBP1P12271 317 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 LRMPQ12912 555 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 PLA2G4DQ86XP0 818 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 MAB21L3Q8N8X9 362 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 ATL2Q8NHH9 583 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 SLC12A5Q9H2X9 1139 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 ATXN2Q99700 1313 aaKnown RBP7.4□□□□□ -1.22
SIK3-212ENST00000488337 CDKL5O76039 1030 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 RTN3O95197 1032 aaPredicted RBP7.4□□□□□ -1.22
SIK3-212ENST00000488337 PYGLP06737 847 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 CCDC178Q5BJE1 867 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 GBP6Q6ZN66 633 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 C3orf20Q8ND61 904 aa7.4□□□□□ -1.22
SIK3-212ENST00000488337 N4BP2L2Q92802 583 aaPredicted RBP7.4□□□□□ -1.22
SIK3-212ENST00000488337 CPSF2Q9P2I0 782 aaKnown RBP7.4□□□□□ -1.22
SIK3-212ENST00000488337 PLA2R1Q13018 1463 aa7.4□□□□□ -1.23
SIK3-212ENST00000488337 USP27XA6NNY8 438 aa7.4□□□□□ -1.23
SIK3-212ENST00000488337 BRD1O95696 1058 aa7.4□□□□□ -1.23
SIK3-212ENST00000488337 NAT1P18440 290 aa7.4□□□□□ -1.23
SIK3-212ENST00000488337 USP8P40818 1118 aa7.4□□□□□ -1.23
SIK3-212ENST00000488337 MNAT1P51948 309 aa7.4□□□□□ -1.23
SIK3-212ENST00000488337 NME8Q8N427 588 aa7.4□□□□□ -1.23
SIK3-212ENST00000488337 AFAP1Q8N556 730 aa7.4□□□□□ -1.23
SIK3-212ENST00000488337 ABCC10Q5T3U5 1492 aa7.4□□□□□ -1.23
SIK3-212ENST00000488337 WDR7Q9Y4E6 1490 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms