RNA–Protein interactions for RNA: ENST00000488311.1

PLD3-213, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 750 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-213ENST00000488311 ELL2O00472 640 aaPredicted RBP16.02■□□□□ 0.16
PLD3-213ENST00000488311 TOMM70O94826 608 aa16.02■□□□□ 0.16
PLD3-213ENST00000488311 KDM2BQ8NHM5 1336 aa16.01■□□□□ 0.15
PLD3-213ENST00000488311 ZC3H4Q9UPT8 1303 aaKnown RBP16.01■□□□□ 0.15
PLD3-213ENST00000488311 CCDC93Q567U6 631 aa16.01■□□□□ 0.15
PLD3-213ENST00000488311 C8orf58Q8NAV2 365 aa16.01■□□□□ 0.15
PLD3-213ENST00000488311 ZNF277Q9NRM2 450 aaPredicted RBP16.01■□□□□ 0.15
PLD3-213ENST00000488311 IFT57Q9NWB7 429 aa16.01■□□□□ 0.15
PLD3-213ENST00000488311 COL4A1P02462 1669 aa16.01■□□□□ 0.15
PLD3-213ENST00000488311 HTRA3P83110 453 aa16■□□□□ 0.15
PLD3-213ENST00000488311 NLRP10Q86W26 655 aa16■□□□□ 0.15
PLD3-213ENST00000488311 TSPYL6Q8N831 410 aa16■□□□□ 0.15
PLD3-213ENST00000488311 WDR90Q96KV7 1748 aa15.99■□□□□ 0.15
PLD3-213ENST00000488311 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
PLD3-213ENST00000488311 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
PLD3-213ENST00000488311 TCIRG1Q13488 830 aa15.99■□□□□ 0.15
PLD3-213ENST00000488311 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
PLD3-213ENST00000488311 UTP14AQ9BVJ6 771 aaKnown RBP15.99■□□□□ 0.15
PLD3-213ENST00000488311 TAF1P21675 1872 aa15.99■□□□□ 0.15
PLD3-213ENST00000488311 ZNF541Q9H0D2 1346 aa15.98■□□□□ 0.15
PLD3-213ENST00000488311 DDNO94850 711 aaPredicted RBP15.98■□□□□ 0.15
PLD3-213ENST00000488311 HOXB7P09629 217 aa15.98■□□□□ 0.15
PLD3-213ENST00000488311 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
PLD3-213ENST00000488311 FKBP4Q02790 459 aaKnown RBP eCLIP15.98■□□□□ 0.15
PLD3-213ENST00000488311 PARP10Q53GL7 1025 aa15.98■□□□□ 0.15
PLD3-213ENST00000488311 PPP1R42Q7Z4L9 355 aa15.98■□□□□ 0.15
PLD3-213ENST00000488311 DDX60Q8IY21 1712 aaKnown RBP15.98■□□□□ 0.15
PLD3-213ENST00000488311 RBM46Q8TBY0 533 aaKnown RBP15.98■□□□□ 0.15
PLD3-213ENST00000488311 PHAXQ9H814 394 aaKnown RBP15.98■□□□□ 0.15
PLD3-213ENST00000488311 MRS2Q9HD23 443 aa15.98■□□□□ 0.15
PLD3-213ENST00000488311 ATP5J2-PTCD1G3V325 749 aa15.97■□□□□ 0.15
PLD3-213ENST00000488311 SOGA3Q5TF21 947 aa15.97■□□□□ 0.15
PLD3-213ENST00000488311 RPGRQ92834 1020 aaKnown RBP15.97■□□□□ 0.15
PLD3-213ENST00000488311 DBF4Q9UBU7 674 aaPredicted RBP15.97■□□□□ 0.15
PLD3-213ENST00000488311 ABCC4O15439 1325 aa15.96■□□□□ 0.15
PLD3-213ENST00000488311 POTEIP0CG38 1075 aa15.96■□□□□ 0.15
PLD3-213ENST00000488311 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
PLD3-213ENST00000488311 ALDH1B1P30837 517 aa15.96■□□□□ 0.15
PLD3-213ENST00000488311 GNAI1P63096 354 aa15.96■□□□□ 0.15
PLD3-213ENST00000488311 SLC10A5Q5PT55 438 aa15.96■□□□□ 0.15
PLD3-213ENST00000488311 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.15
PLD3-213ENST00000488311 PLBD2Q8NHP8 589 aa15.96■□□□□ 0.15
PLD3-213ENST00000488311 ISCA1Q9BUE6 129 aa15.96■□□□□ 0.15
PLD3-213ENST00000488311 PPEF1O14829 653 aaPredicted RBP15.95■□□□□ 0.14
PLD3-213ENST00000488311 ANP32CO43423 234 aa15.95■□□□□ 0.14
PLD3-213ENST00000488311 ANKRD13DQ6ZTN6 518 aa15.95■□□□□ 0.14
PLD3-213ENST00000488311 WWC1Q8IX03 1113 aa15.95■□□□□ 0.14
PLD3-213ENST00000488311 TRMT112Q9UI30 125 aaKnown RBP15.95■□□□□ 0.14
PLD3-213ENST00000488311 VEGFAP15692 232 aaPredicted RBP15.94■□□□□ 0.14
PLD3-213ENST00000488311 IARSP41252 1262 aaKnown RBP15.94■□□□□ 0.14
PLD3-213ENST00000488311 HSP90AB3PQ58FF7 597 aa15.94■□□□□ 0.14
PLD3-213ENST00000488311 RTL5Q5HYW3 569 aaPredicted RBP15.94■□□□□ 0.14
PLD3-213ENST00000488311 NLRP3Q96P20 1036 aa15.94■□□□□ 0.14
PLD3-213ENST00000488311 CRAMP1Q96RY5 1269 aa15.94■□□□□ 0.14
PLD3-213ENST00000488311 SALL2Q9Y467 1007 aaPredicted RBP15.94■□□□□ 0.14
PLD3-213ENST00000488311 RTKN2Q8IZC4 609 aa15.93■□□□□ 0.14
PLD3-213ENST00000488311 FAM89AQ96GI7 184 aa15.93■□□□□ 0.14
PLD3-213ENST00000488311 RBM17Q96I25 401 aaKnown RBP15.93■□□□□ 0.14
PLD3-213ENST00000488311 HYPKQ9NX55 129 aa15.93■□□□□ 0.14
PLD3-213ENST00000488311 SH3TC1Q8TE82 1336 aa15.93■□□□□ 0.14
PLD3-213ENST00000488311 PCNTO95613 3336 aa15.93■□□□□ 0.14
PLD3-213ENST00000488311 CALD1Q05682 793 aaKnown RBP15.92■□□□□ 0.14
PLD3-213ENST00000488311 CCDC27Q2M243 656 aa15.92■□□□□ 0.14
PLD3-213ENST00000488311 PSMD1Q99460 953 aa15.92■□□□□ 0.14
PLD3-213ENST00000488311 FSTL1Q12841 308 aa15.91■□□□□ 0.14
PLD3-213ENST00000488311 DPY19L2Q6NUT2 758 aa15.91■□□□□ 0.14
PLD3-213ENST00000488311 DNAJC5GQ8N7S2 189 aa15.91■□□□□ 0.14
PLD3-213ENST00000488311 JARID2Q92833 1246 aaPredicted RBP15.91■□□□□ 0.14
PLD3-213ENST00000488311 DUOX1Q9NRD9 1551 aa15.91■□□□□ 0.14
PLD3-213ENST00000488311 RNF123Q5XPI4 1314 aa15.91■□□□□ 0.14
PLD3-213ENST00000488311 LTBP1Q14766 1721 aa15.91■□□□□ 0.14
PLD3-213ENST00000488311 FZD9O00144 591 aa15.9■□□□□ 0.14
PLD3-213ENST00000488311 APLP1P51693 650 aa15.9■□□□□ 0.14
PLD3-213ENST00000488311 G2E3Q7L622 706 aa15.9■□□□□ 0.14
PLD3-213ENST00000488311 SMC1BQ8NDV3 1235 aa15.9■□□□□ 0.14
PLD3-213ENST00000488311 MYD88Q99836 296 aa15.9■□□□□ 0.14
PLD3-213ENST00000488311 SPINK5Q9NQ38 1064 aaPredicted RBP15.9■□□□□ 0.14
PLD3-213ENST00000488311 RIC3Q7Z5B4 369 aa15.89■□□□□ 0.13
PLD3-213ENST00000488311 L3MBTL3Q96JM7 780 aaPredicted RBP15.89■□□□□ 0.13
PLD3-213ENST00000488311 ATP6V0A2Q9Y487 856 aa15.89■□□□□ 0.13
PLD3-213ENST00000488311 FANCIQ9NVI1 1328 aa15.89■□□□□ 0.13
PLD3-213ENST00000488311 LRRC37AA6NMS7 1700 aa15.88■□□□□ 0.13
PLD3-213ENST00000488311 AOC3Q16853 763 aa15.88■□□□□ 0.13
PLD3-213ENST00000488311 CELF1Q92879 486 aaKnown RBP15.88■□□□□ 0.13
PLD3-213ENST00000488311 GOLGA2Q08379 1002 aa15.87■□□□□ 0.13
PLD3-213ENST00000488311 GRAPQ13588 217 aa15.87■□□□□ 0.13
PLD3-213ENST00000488311 CCDC30Q5VVM6 783 aa15.87■□□□□ 0.13
PLD3-213ENST00000488311 CC2D2BQ6DHV5 1058 aa15.87■□□□□ 0.13
PLD3-213ENST00000488311 FAM9BQ8IZU0 186 aa15.87■□□□□ 0.13
PLD3-213ENST00000488311 GRAPLQ8TC17 118 aaPredicted RBP15.87■□□□□ 0.13
PLD3-213ENST00000488311 TAF1DQ9H5J8 278 aaPredicted RBP15.87■□□□□ 0.13
PLD3-213ENST00000488311 ADAMTSL1Q8N6G6 1762 aa15.87■□□□□ 0.13
PLD3-213ENST00000488311 SCN4AP35499 1836 aa15.87■□□□□ 0.13
PLD3-213ENST00000488311 IRS4O14654 1257 aaPredicted RBP15.86■□□□□ 0.13
PLD3-213ENST00000488311 TRIM28Q13263 835 aaKnown RBP15.86■□□□□ 0.13
PLD3-213ENST00000488311 TWISTNBQ3B726 338 aaPredicted RBP15.86■□□□□ 0.13
PLD3-213ENST00000488311 LARGE2Q8N3Y3 721 aa15.86■□□□□ 0.13
PLD3-213ENST00000488311 MAP3K2Q9Y2U5 619 aa15.86■□□□□ 0.13
PLD3-213ENST00000488311 IL16Q14005 1332 aa15.86■□□□□ 0.13
PLD3-213ENST00000488311 PPIP5K2O43314 1243 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms