RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 OIP5O43482 229 aa9.24□□□□□ -0.93
VPS8-224ENST00000488255 PTCD1O75127 700 aaKnown RBP9.24□□□□□ -0.93
VPS8-224ENST00000488255 ARHGEF15O94989 841 aa9.24□□□□□ -0.93
VPS8-224ENST00000488255 ARAFP10398 606 aa9.24□□□□□ -0.93
VPS8-224ENST00000488255 MARSP56192 900 aaKnown RBP9.24□□□□□ -0.93
VPS8-224ENST00000488255 IER5Q5VY09 327 aa9.24□□□□□ -0.93
VPS8-224ENST00000488255 SYT9Q86SS6 491 aa9.24□□□□□ -0.93
VPS8-224ENST00000488255 EDARADDQ8WWZ3 215 aa9.24□□□□□ -0.93
VPS8-224ENST00000488255 AMPD1P23109 780 aa9.23□□□□□ -0.93
VPS8-224ENST00000488255 ADH6P28332 368 aa9.23□□□□□ -0.93
VPS8-224ENST00000488255 TREML1Q86YW5 311 aa9.23□□□□□ -0.93
VPS8-224ENST00000488255 RETREG2Q8NC44 543 aa9.23□□□□□ -0.93
VPS8-224ENST00000488255 BHMTQ93088 406 aa9.23□□□□□ -0.93
VPS8-224ENST00000488255 DMGDHQ9UI17 866 aaKnown RBP9.23□□□□□ -0.93
VPS8-224ENST00000488255 KLF15Q9UIH9 416 aa9.23□□□□□ -0.93
VPS8-224ENST00000488255 SHISA8B8ZZ34 492 aa9.22□□□□□ -0.93
VPS8-224ENST00000488255 TBC1D8BQ0IIM8 1120 aa9.22□□□□□ -0.93
VPS8-224ENST00000488255 ZNF468Q5VIY5 522 aaPredicted RBP9.22□□□□□ -0.93
VPS8-224ENST00000488255 COL26A1Q96A83 441 aa9.22□□□□□ -0.93
VPS8-224ENST00000488255 IGFLR1Q9H665 355 aa9.22□□□□□ -0.93
VPS8-224ENST00000488255 RRAGCQ9HB90 399 aa9.22□□□□□ -0.93
VPS8-224ENST00000488255 BRD2P25440 801 aaKnown RBP9.21□□□□□ -0.94
VPS8-224ENST00000488255 SSFA2P28290 1259 aa9.21□□□□□ -0.94
VPS8-224ENST00000488255 ARSDP51689 593 aa9.21□□□□□ -0.94
VPS8-224ENST00000488255 FAM26DQ5JW98 314 aa9.21□□□□□ -0.94
VPS8-224ENST00000488255 SLCO4C1Q6ZQN7 724 aa9.21□□□□□ -0.94
VPS8-224ENST00000488255 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
VPS8-224ENST00000488255 ETFBKMTQ8IXQ9 262 aa9.21□□□□□ -0.94
VPS8-224ENST00000488255 RGL4Q8IZJ4 473 aa9.21□□□□□ -0.94
VPS8-224ENST00000488255 EPB42P16452 691 aa9.2□□□□□ -0.94
VPS8-224ENST00000488255 INPP5BP32019 993 aa9.2□□□□□ -0.94
VPS8-224ENST00000488255 KCNQ4P56696 695 aa9.2□□□□□ -0.94
VPS8-224ENST00000488255 NEUROD1Q13562 356 aa9.2□□□□□ -0.94
VPS8-224ENST00000488255 FCHSD1Q86WN1 690 aa9.2□□□□□ -0.94
VPS8-224ENST00000488255 CMTR1Q8N1G2 835 aaKnown RBP9.2□□□□□ -0.94
VPS8-224ENST00000488255 PNMA5Q96PV4 448 aa9.2□□□□□ -0.94
VPS8-224ENST00000488255 TNFRSF10BO14763 440 aa9.19□□□□□ -0.94
VPS8-224ENST00000488255 OPLAHO14841 1288 aa9.19□□□□□ -0.94
VPS8-224ENST00000488255 GRNP28799 593 aaKnown RBP9.19□□□□□ -0.94
VPS8-224ENST00000488255 RTCBQ9Y3I0 505 aaKnown RBP9.19□□□□□ -0.94
VPS8-224ENST00000488255 EPXP11678 715 aa9.18□□□□□ -0.94
VPS8-224ENST00000488255 CCINQ13939 588 aa9.18□□□□□ -0.94
VPS8-224ENST00000488255 AVENQ9NQS1 362 aaPredicted RBP9.18□□□□□ -0.94
VPS8-224ENST00000488255 STIM2Q9P246 746 aa9.18□□□□□ -0.94
VPS8-224ENST00000488255 USTQ9Y2C2 406 aa9.18□□□□□ -0.94
VPS8-224ENST00000488255 CNTNAP5Q8WYK1 1306 aa9.17□□□□□ -0.94
VPS8-224ENST00000488255 NFKB1P19838 968 aa9.17□□□□□ -0.94
VPS8-224ENST00000488255 MTMR3Q13615 1198 aa9.17□□□□□ -0.94
VPS8-224ENST00000488255 PHLDB3Q6NSJ2 640 aa9.17□□□□□ -0.94
VPS8-224ENST00000488255 GTF3C2Q8WUA4 911 aaPredicted RBP9.17□□□□□ -0.94
VPS8-224ENST00000488255 BTBD6Q96KE9 485 aa9.17□□□□□ -0.94
VPS8-224ENST00000488255 GSX2Q9BZM3 304 aa9.17□□□□□ -0.94
VPS8-224ENST00000488255 ZBTB39O15060 712 aa9.16□□□□□ -0.94
VPS8-224ENST00000488255 SASH3O75995 380 aa9.16□□□□□ -0.94
VPS8-224ENST00000488255 ABL1P00519 1130 aa9.16□□□□□ -0.94
VPS8-224ENST00000488255 ANO2Q9NQ90 1003 aa9.16□□□□□ -0.94
VPS8-224ENST00000488255 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.16□□□□□ -0.94
VPS8-224ENST00000488255 SIN3BO75182 1162 aa9.15□□□□□ -0.94
VPS8-224ENST00000488255 TARSP26639 723 aaKnown RBP9.15□□□□□ -0.94
VPS8-224ENST00000488255 ZAP70P43403 619 aa9.15□□□□□ -0.94
VPS8-224ENST00000488255 SNRPNP63162 240 aaKnown RBP9.15□□□□□ -0.94
VPS8-224ENST00000488255 PODNQ7Z5L7 613 aa9.15□□□□□ -0.94
VPS8-224ENST00000488255 UBE2OQ9C0C9 1292 aaKnown RBP9.15□□□□□ -0.94
VPS8-224ENST00000488255 LRRC4BQ9NT99 713 aa9.15□□□□□ -0.94
VPS8-224ENST00000488255 ALAS2P22557 587 aa9.14□□□□□ -0.95
VPS8-224ENST00000488255 IRS1P35568 1242 aa9.14□□□□□ -0.95
VPS8-224ENST00000488255 CHSY3Q70JA7 882 aa9.14□□□□□ -0.95
VPS8-224ENST00000488255 ATCAYQ86WG3 371 aa9.14□□□□□ -0.95
VPS8-224ENST00000488255 HELQQ8TDG4 1101 aa9.14□□□□□ -0.95
VPS8-224ENST00000488255 GPR152Q8TDT2 470 aa9.14□□□□□ -0.95
VPS8-224ENST00000488255 ELOA3CA0A087WX78 387 aaPredicted RBP9.13□□□□□ -0.95
VPS8-224ENST00000488255 ELOA3DA6NLF2 546 aaPredicted RBP9.13□□□□□ -0.95
VPS8-224ENST00000488255 XYLBO75191 536 aa9.13□□□□□ -0.95
VPS8-224ENST00000488255 ADH7P40394 386 aa9.13□□□□□ -0.95
VPS8-224ENST00000488255 ELOA3BQ3SY89 546 aa9.13□□□□□ -0.95
VPS8-224ENST00000488255 ABTB2Q8N961 1025 aa9.13□□□□□ -0.95
VPS8-224ENST00000488255 ELOA3Q8NG57 546 aa9.13□□□□□ -0.95
VPS8-224ENST00000488255 SCARF2Q96GP6 870 aaPredicted RBP9.13□□□□□ -0.95
VPS8-224ENST00000488255 MTMR7Q9Y216 660 aa9.13□□□□□ -0.95
VPS8-224ENST00000488255 RARAP10276 462 aa9.12□□□□□ -0.95
VPS8-224ENST00000488255 ZNF211Q13398 564 aaPredicted RBP9.12□□□□□ -0.95
VPS8-224ENST00000488255 AAMPQ13685 434 aa9.12□□□□□ -0.95
VPS8-224ENST00000488255 B4GALNT3Q6L9W6 998 aa9.12□□□□□ -0.95
VPS8-224ENST00000488255 BEND7Q8N7W2 519 aaPredicted RBP9.12□□□□□ -0.95
VPS8-224ENST00000488255 PIK3R5Q8WYR1 880 aa9.12□□□□□ -0.95
VPS8-224ENST00000488255 ZFATQ9P243 1243 aa9.12□□□□□ -0.95
VPS8-224ENST00000488255 MPSTP25325 297 aa9.11□□□□□ -0.95
VPS8-224ENST00000488255 KCNMB2Q9Y691 235 aa9.11□□□□□ -0.95
VPS8-224ENST00000488255 UBAP1LF5GYI3 381 aa9.1□□□□□ -0.95
VPS8-224ENST00000488255 MLLT1Q03111 559 aaPredicted RBP9.1□□□□□ -0.95
VPS8-224ENST00000488255 TNFRSF25Q93038 417 aa9.1□□□□□ -0.95
VPS8-224ENST00000488255 DNAJB12Q9NXW2 375 aaKnown RBP9.1□□□□□ -0.95
VPS8-224ENST00000488255 FAM13BQ9NYF5 915 aa9.1□□□□□ -0.95
VPS8-224ENST00000488255 ADARB2-AS1A8MUL3 147 aa9.09□□□□□ -0.95
VPS8-224ENST00000488255 RNF225M0QZC1 329 aaPredicted RBP9.09□□□□□ -0.95
VPS8-224ENST00000488255 DNM1Q05193 864 aaKnown RBP9.09□□□□□ -0.95
VPS8-224ENST00000488255 PDE4CQ08493 712 aa9.09□□□□□ -0.95
VPS8-224ENST00000488255 TRIP4Q15650 581 aaPredicted RBP9.09□□□□□ -0.95
VPS8-224ENST00000488255 NOM1Q5C9Z4 860 aaKnown RBP9.09□□□□□ -0.95
VPS8-224ENST00000488255 MKL2Q9ULH7 1088 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms