RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 KIF16BQ96L93 1317 aa19.98■□□□□ 0.79
C9orf3-219ENST00000488186 IBTKQ9P2D0 1353 aaPredicted RBP19.97■□□□□ 0.79
C9orf3-219ENST00000488186 GOLGB1Q14789 3259 aaKnown RBP19.97■□□□□ 0.79
C9orf3-219ENST00000488186 BCAR3O75815 825 aa19.97■□□□□ 0.79
C9orf3-219ENST00000488186 TRIM28Q13263 835 aaKnown RBP19.97■□□□□ 0.79
C9orf3-219ENST00000488186 NUTM1Q86Y26 1132 aa19.97■□□□□ 0.79
C9orf3-219ENST00000488186 CCDC191Q8NCU4 936 aa19.97■□□□□ 0.79
C9orf3-219ENST00000488186 PXDNLA1KZ92 1463 aa19.97■□□□□ 0.79
C9orf3-219ENST00000488186 PDE6BP35913 854 aa19.96■□□□□ 0.79
C9orf3-219ENST00000488186 BRPF1P55201 1214 aaPredicted RBP19.96■□□□□ 0.79
C9orf3-219ENST00000488186 BRIP1Q9BX63 1249 aa19.96■□□□□ 0.79
C9orf3-219ENST00000488186 API5Q9BZZ5 524 aaKnown RBP19.96■□□□□ 0.79
C9orf3-219ENST00000488186 UTRNP46939 3433 aa19.96■□□□□ 0.79
C9orf3-219ENST00000488186 ERFEQ4G0M1 354 aa19.95■□□□□ 0.78
C9orf3-219ENST00000488186 LINS1Q8NG48 757 aa19.95■□□□□ 0.78
C9orf3-219ENST00000488186 SH3TC1Q8TE82 1336 aa19.95■□□□□ 0.78
C9orf3-219ENST00000488186 ANKRD36CQ5JPF3 1778 aa19.94■□□□□ 0.78
C9orf3-219ENST00000488186 ARFGEF2Q9Y6D5 1785 aa19.94■□□□□ 0.78
C9orf3-219ENST00000488186 H0YIN7 160 aa19.94■□□□□ 0.78
C9orf3-219ENST00000488186 GRIN3BO60391 1043 aa19.94■□□□□ 0.78
C9orf3-219ENST00000488186 NTSR2O95665 410 aa19.94■□□□□ 0.78
C9orf3-219ENST00000488186 HSP90B1P14625 803 aaKnown RBP19.94■□□□□ 0.78
C9orf3-219ENST00000488186 CWF19L2Q2TBE0 894 aaKnown RBP19.94■□□□□ 0.78
C9orf3-219ENST00000488186 RTL5Q5HYW3 569 aaPredicted RBP19.94■□□□□ 0.78
C9orf3-219ENST00000488186 RCAN3Q9UKA8 241 aa19.94■□□□□ 0.78
C9orf3-219ENST00000488186 RNF123Q5XPI4 1314 aa19.94■□□□□ 0.78
C9orf3-219ENST00000488186 N4BP2Q86UW6 1770 aaPredicted RBP19.93■□□□□ 0.78
C9orf3-219ENST00000488186 DLEC1Q9Y238 1755 aa19.93■□□□□ 0.78
C9orf3-219ENST00000488186 A0A0G2JLW4 131 aa19.93■□□□□ 0.78
C9orf3-219ENST00000488186 NEURL1BA8MQ27 555 aa19.93■□□□□ 0.78
C9orf3-219ENST00000488186 IGKV5-2P06315 115 aa19.93■□□□□ 0.78
C9orf3-219ENST00000488186 KCNA3P22001 575 aa19.93■□□□□ 0.78
C9orf3-219ENST00000488186 C2CD5Q86YS7 1000 aa19.93■□□□□ 0.78
C9orf3-219ENST00000488186 ARHGAP45Q92619 1136 aa19.93■□□□□ 0.78
C9orf3-219ENST00000488186 FAM89AQ96GI7 184 aa19.93■□□□□ 0.78
C9orf3-219ENST00000488186 SRCIN1Q9C0H9 1055 aa19.93■□□□□ 0.78
C9orf3-219ENST00000488186 CHD4Q14839 1912 aa19.93■□□□□ 0.78
C9orf3-219ENST00000488186 ANKRD31Q8N7Z5 1873 aa19.92■□□□□ 0.78
C9orf3-219ENST00000488186 KLRG2A4D1S0 409 aaPredicted RBP19.92■□□□□ 0.78
C9orf3-219ENST00000488186 ZBTB38Q8NAP3 1195 aaPredicted RBP19.92■□□□□ 0.78
C9orf3-219ENST00000488186 NLRP3Q96P20 1036 aa19.92■□□□□ 0.78
C9orf3-219ENST00000488186 RIC1Q4ADV7 1423 aa19.92■□□□□ 0.78
C9orf3-219ENST00000488186 ARFGEF1Q9Y6D6 1849 aa19.91■□□□□ 0.78
C9orf3-219ENST00000488186 DPEP1P16444 411 aa19.91■□□□□ 0.78
C9orf3-219ENST00000488186 GPR162Q16538 588 aa19.91■□□□□ 0.78
C9orf3-219ENST00000488186 BEND3Q5T5X7 828 aa19.91■□□□□ 0.78
C9orf3-219ENST00000488186 ZKSCAN2Q63HK3 967 aa19.91■□□□□ 0.78
C9orf3-219ENST00000488186 PELP1Q8IZL8 1130 aaKnown RBP19.91■□□□□ 0.78
C9orf3-219ENST00000488186 ALDH1L1O75891 902 aa19.9■□□□□ 0.78
C9orf3-219ENST00000488186 PCCAP05165 728 aaPredicted RBP19.9■□□□□ 0.78
C9orf3-219ENST00000488186 HCLS1P14317 486 aaPredicted RBP19.9■□□□□ 0.78
C9orf3-219ENST00000488186 CHRNA5P30532 468 aa19.9■□□□□ 0.78
C9orf3-219ENST00000488186 GCKRQ14397 625 aa19.9■□□□□ 0.78
C9orf3-219ENST00000488186 ZNF622Q969S3 477 aaKnown RBP eCLIP19.9■□□□□ 0.78
C9orf3-219ENST00000488186 C9orf78Q9NZ63 289 aaPredicted RBP19.9■□□□□ 0.78
C9orf3-219ENST00000488186 PIM2Q9P1W9 311 aa19.9■□□□□ 0.78
C9orf3-219ENST00000488186 IRS4O14654 1257 aaPredicted RBP19.89■□□□□ 0.77
C9orf3-219ENST00000488186 SLC10A5Q5PT55 438 aa19.89■□□□□ 0.77
C9orf3-219ENST00000488186 ATF7IPQ6VMQ6 1270 aa19.89■□□□□ 0.77
C9orf3-219ENST00000488186 SYNE4Q8N205 404 aa19.89■□□□□ 0.77
C9orf3-219ENST00000488186 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
C9orf3-219ENST00000488186 RPGRQ92834 1020 aaKnown RBP19.89■□□□□ 0.77
C9orf3-219ENST00000488186 CCT4P50991 539 aaKnown RBP19.88■□□□□ 0.77
C9orf3-219ENST00000488186 FTSJ3Q8IY81 847 aaKnown RBP19.88■□□□□ 0.77
C9orf3-219ENST00000488186 WWC3Q9ULE0 1092 aa19.88■□□□□ 0.77
C9orf3-219ENST00000488186 YBX3P16989 372 aaKnown RBP eCLIP19.87■□□□□ 0.77
C9orf3-219ENST00000488186 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.87■□□□□ 0.77
C9orf3-219ENST00000488186 CLUAP1Q96AJ1 413 aa19.87■□□□□ 0.77
C9orf3-219ENST00000488186 MASTLQ96GX5 879 aa19.87■□□□□ 0.77
C9orf3-219ENST00000488186 ABCC12Q96J65 1359 aa19.86■□□□□ 0.77
C9orf3-219ENST00000488186 MS4A1P11836 297 aa19.86■□□□□ 0.77
C9orf3-219ENST00000488186 UBE3BQ7Z3V4 1068 aa19.86■□□□□ 0.77
C9orf3-219ENST00000488186 H7C1W4 665 aa19.85■□□□□ 0.77
C9orf3-219ENST00000488186 TRIM27P14373 513 aa19.85■□□□□ 0.77
C9orf3-219ENST00000488186 NPR1P16066 1061 aa19.85■□□□□ 0.77
C9orf3-219ENST00000488186 DALRD3Q5D0E6 543 aaKnown RBP19.85■□□□□ 0.77
C9orf3-219ENST00000488186 STYK1Q6J9G0 422 aa19.85■□□□□ 0.77
C9orf3-219ENST00000488186 CNKSR1Q969H4 720 aa19.85■□□□□ 0.77
C9orf3-219ENST00000488186 RBM17Q96I25 401 aaKnown RBP19.85■□□□□ 0.77
C9orf3-219ENST00000488186 BCS1LQ9Y276 419 aa19.85■□□□□ 0.77
C9orf3-219ENST00000488186 GRM8O00222 908 aa19.84■□□□□ 0.77
C9orf3-219ENST00000488186 PDE8AO60658 829 aa19.84■□□□□ 0.77
C9orf3-219ENST00000488186 SRGNP10124 158 aa19.84■□□□□ 0.77
C9orf3-219ENST00000488186 ALDH1B1P30837 517 aa19.84■□□□□ 0.77
C9orf3-219ENST00000488186 TTLL6Q8N841 843 aa19.84■□□□□ 0.77
C9orf3-219ENST00000488186 CDHR2Q9BYE9 1310 aa19.83■□□□□ 0.77
C9orf3-219ENST00000488186 CRY2Q49AN0 593 aa19.83■□□□□ 0.77
C9orf3-219ENST00000488186 DZIP1LQ8IYY4 767 aaKnown RBP19.83■□□□□ 0.77
C9orf3-219ENST00000488186 DDX46Q7L014 1031 aaKnown RBP19.82■□□□□ 0.76
C9orf3-219ENST00000488186 COL11A2P13942 1736 aaPredicted RBP19.82■□□□□ 0.76
C9orf3-219ENST00000488186 CCDC152Q4G0S7 254 aa19.81■□□□□ 0.76
C9orf3-219ENST00000488186 INTS3Q68E01 1043 aaKnown RBP19.81■□□□□ 0.76
C9orf3-219ENST00000488186 C3orf67Q6ZVT6 689 aa19.81■□□□□ 0.76
C9orf3-219ENST00000488186 HDAC5Q9UQL6 1122 aa19.81■□□□□ 0.76
C9orf3-219ENST00000488186 ABCC4O15439 1325 aa19.8■□□□□ 0.76
C9orf3-219ENST00000488186 HOXA10P31260 410 aaPredicted RBP19.8■□□□□ 0.76
C9orf3-219ENST00000488186 SF3B3Q15393 1217 aaKnown RBP19.8■□□□□ 0.76
C9orf3-219ENST00000488186 TMX4Q9H1E5 349 aaPredicted RBP19.8■□□□□ 0.76
C9orf3-219ENST00000488186 TNNQ9UQP3 1299 aa19.8■□□□□ 0.76
C9orf3-219ENST00000488186 PLIN1O60240 522 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms