RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 RPGRQ92834 1020 aaKnown RBP30.63■■■□□ 2.49
RNF38-208ENST00000488058 ZNF428Q96B54 188 aa30.63■■■□□ 2.49
RNF38-208ENST00000488058 IL16Q14005 1332 aa30.63■■■□□ 2.49
RNF38-208ENST00000488058 NLRP10Q86W26 655 aa30.62■■■□□ 2.49
RNF38-208ENST00000488058 PHAXQ9H814 394 aaKnown RBP30.62■■■□□ 2.49
RNF38-208ENST00000488058 RIC1Q4ADV7 1423 aa30.62■■■□□ 2.49
RNF38-208ENST00000488058 PRELPP51888 382 aa30.61■■■□□ 2.49
RNF38-208ENST00000488058 C1QTNF8P60827 252 aa30.61■■■□□ 2.49
RNF38-208ENST00000488058 SOGA3Q5TF21 947 aa30.61■■■□□ 2.49
RNF38-208ENST00000488058 CCDC30Q5VVM6 783 aa30.61■■■□□ 2.49
RNF38-208ENST00000488058 ALDH1B1P30837 517 aa30.6■■■□□ 2.49
RNF38-208ENST00000488058 GOLGA2Q08379 1002 aa30.6■■■□□ 2.49
RNF38-208ENST00000488058 CRY2Q49AN0 593 aa30.6■■■□□ 2.49
RNF38-208ENST00000488058 TIAM2Q8IVF5 1701 aa30.6■■■□□ 2.49
RNF38-208ENST00000488058 RIC3Q7Z5B4 369 aa30.59■■■□□ 2.49
RNF38-208ENST00000488058 CHMP4AQ9BY43 222 aa30.59■■■□□ 2.49
RNF38-208ENST00000488058 TAOK3Q9H2K8 898 aa30.59■■■□□ 2.49
RNF38-208ENST00000488058 TRMT112Q9UI30 125 aaKnown RBP30.59■■■□□ 2.49
RNF38-208ENST00000488058 ATP5J2-PTCD1G3V325 749 aa30.58■■■□□ 2.49
RNF38-208ENST00000488058 TCERG1O14776 1098 aaKnown RBP30.58■■■□□ 2.49
RNF38-208ENST00000488058 TWISTNBQ3B726 338 aaPredicted RBP30.58■■■□□ 2.49
RNF38-208ENST00000488058 CCDC93Q567U6 631 aa30.58■■■□□ 2.49
RNF38-208ENST00000488058 WDR63Q8IWG1 891 aa30.58■■■□□ 2.49
RNF38-208ENST00000488058 NLRP3Q96P20 1036 aa30.58■■■□□ 2.49
RNF38-208ENST00000488058 C3orf67Q6ZVT6 689 aa30.57■■■□□ 2.48
RNF38-208ENST00000488058 RNF123Q5XPI4 1314 aa30.56■■■□□ 2.48
RNF38-208ENST00000488058 FANCIQ9NVI1 1328 aa30.56■■■□□ 2.48
RNF38-208ENST00000488058 OLFM4Q6UX06 510 aa30.56■■■□□ 2.48
RNF38-208ENST00000488058 C7orf43Q8WVR3 580 aa30.56■■■□□ 2.48
RNF38-208ENST00000488058 RBM17Q96I25 401 aaKnown RBP30.56■■■□□ 2.48
RNF38-208ENST00000488058 SH3TC1Q8TE82 1336 aa30.55■■■□□ 2.48
RNF38-208ENST00000488058 SYNE4Q8N205 404 aa30.55■■■□□ 2.48
RNF38-208ENST00000488058 STK31Q9BXU1 1019 aa30.55■■■□□ 2.48
RNF38-208ENST00000488058 NMRK2Q9NPI5 230 aa30.55■■■□□ 2.48
RNF38-208ENST00000488058 LAMB2P55268 1798 aa30.54■■■□□ 2.48
RNF38-208ENST00000488058 KDM2BQ8NHM5 1336 aa30.54■■■□□ 2.48
RNF38-208ENST00000488058 LTBP3Q9NS15 1303 aa30.54■■■□□ 2.48
RNF38-208ENST00000488058 HCLS1P14317 486 aaPredicted RBP30.54■■■□□ 2.48
RNF38-208ENST00000488058 SLC10A5Q5PT55 438 aa30.54■■■□□ 2.48
RNF38-208ENST00000488058 ISCA1Q9BUE6 129 aa30.54■■■□□ 2.48
RNF38-208ENST00000488058 KIF3CO14782 793 aa30.53■■■□□ 2.48
RNF38-208ENST00000488058 DICER1Q9UPY3 1922 aaKnown RBP30.53■■■□□ 2.48
RNF38-208ENST00000488058 ZC3H4Q9UPT8 1303 aaKnown RBP30.52■■■□□ 2.48
RNF38-208ENST00000488058 HOXA10P31260 410 aaPredicted RBP30.52■■■□□ 2.48
RNF38-208ENST00000488058 DDX58O95786 925 aaKnown RBP30.51■■■□□ 2.47
RNF38-208ENST00000488058 MYD88Q99836 296 aa30.51■■■□□ 2.47
RNF38-208ENST00000488058 RTL5Q5HYW3 569 aaPredicted RBP30.5■■■□□ 2.47
RNF38-208ENST00000488058 CRAMP1Q96RY5 1269 aa30.5■■■□□ 2.47
RNF38-208ENST00000488058 FKBP4Q02790 459 aaKnown RBP eCLIP30.49■■■□□ 2.47
RNF38-208ENST00000488058 RTKN2Q8IZC4 609 aa30.49■■■□□ 2.47
RNF38-208ENST00000488058 FAM89AQ96GI7 184 aa30.49■■■□□ 2.47
RNF38-208ENST00000488058 PPEF1O14829 653 aaPredicted RBP30.48■■■□□ 2.47
RNF38-208ENST00000488058 EXOSC9Q06265 439 aaKnown RBP30.48■■■□□ 2.47
RNF38-208ENST00000488058 SPINK5Q9NQ38 1064 aaPredicted RBP30.48■■■□□ 2.47
RNF38-208ENST00000488058 DDX60Q8IY21 1712 aaKnown RBP30.47■■■□□ 2.47
RNF38-208ENST00000488058 MYH16Q9H6N6 1097 aa30.46■■■□□ 2.47
RNF38-208ENST00000488058 RRAGCQ9HB90 399 aa30.46■■■□□ 2.47
RNF38-208ENST00000488058 ZNF277Q9NRM2 450 aaPredicted RBP30.46■■■□□ 2.47
RNF38-208ENST00000488058 MAP3K2Q9Y2U5 619 aa30.46■■■□□ 2.47
RNF38-208ENST00000488058 ABCC4O15439 1325 aa30.46■■■□□ 2.47
RNF38-208ENST00000488058 GLTPD2A6NH11 291 aa30.45■■■□□ 2.47
RNF38-208ENST00000488058 SLC4A2P04920 1241 aa30.45■■■□□ 2.47
RNF38-208ENST00000488058 TRIM28Q13263 835 aaKnown RBP30.44■■■□□ 2.46
RNF38-208ENST00000488058 C16orf71Q8IYS4 520 aaPredicted RBP30.44■■■□□ 2.46
RNF38-208ENST00000488058 METTL22Q9BUU2 404 aaPredicted RBP30.44■■■□□ 2.46
RNF38-208ENST00000488058 CC2D2BQ6DHV5 1058 aa30.43■■■□□ 2.46
RNF38-208ENST00000488058 DDX46Q7L014 1031 aaKnown RBP30.43■■■□□ 2.46
RNF38-208ENST00000488058 G2E3Q7L622 706 aa30.43■■■□□ 2.46
RNF38-208ENST00000488058 SLC51AQ86UW1 340 aa30.43■■■□□ 2.46
RNF38-208ENST00000488058 TMX4Q9H1E5 349 aaPredicted RBP30.43■■■□□ 2.46
RNF38-208ENST00000488058 PI4KAP2A4QPH2 592 aa30.42■■■□□ 2.46
RNF38-208ENST00000488058 VAMP4O75379 141 aa30.42■■■□□ 2.46
RNF38-208ENST00000488058 DPY19L2Q6NUT2 758 aa30.42■■■□□ 2.46
RNF38-208ENST00000488058 KSR2Q6VAB6 950 aa30.42■■■□□ 2.46
RNF38-208ENST00000488058 PI4KAP1Q8N8J0 262 aa30.42■■■□□ 2.46
RNF38-208ENST00000488058 IRS4O14654 1257 aaPredicted RBP30.41■■■□□ 2.46
RNF38-208ENST00000488058 TAF1P21675 1872 aa30.41■■■□□ 2.46
RNF38-208ENST00000488058 CCER2I3L3R5 266 aa30.4■■■□□ 2.46
RNF38-208ENST00000488058 CCDC191Q8NCU4 936 aa30.4■■■□□ 2.46
RNF38-208ENST00000488058 CWC25Q9NXE8 425 aaPredicted RBP30.4■■■□□ 2.46
RNF38-208ENST00000488058 SNED1Q8TER0 1413 aa30.39■■■□□ 2.46
RNF38-208ENST00000488058 TOMM70O94826 608 aa30.39■■■□□ 2.46
RNF38-208ENST00000488058 IARSP41252 1262 aaKnown RBP30.39■■■□□ 2.46
RNF38-208ENST00000488058 ZBTB38Q8NAP3 1195 aaPredicted RBP30.39■■■□□ 2.46
RNF38-208ENST00000488058 NEXNQ0ZGT2 675 aa30.38■■■□□ 2.45
RNF38-208ENST00000488058 GRAPQ13588 217 aa30.38■■■□□ 2.45
RNF38-208ENST00000488058 GRAPLQ8TC17 118 aaPredicted RBP30.38■■■□□ 2.45
RNF38-208ENST00000488058 JARID2Q92833 1246 aaPredicted RBP30.38■■■□□ 2.45
RNF38-208ENST00000488058 PSMD1Q99460 953 aa30.38■■■□□ 2.45
RNF38-208ENST00000488058 ATP6V0A2Q9Y487 856 aa30.38■■■□□ 2.45
RNF38-208ENST00000488058 CACNA1FO60840 1977 aa30.37■■■□□ 2.45
RNF38-208ENST00000488058 FLIIQ13045 1269 aa30.37■■■□□ 2.45
RNF38-208ENST00000488058 ZNF521Q96K83 1311 aa30.37■■■□□ 2.45
RNF38-208ENST00000488058 BBOX1O75936 387 aa30.36■■■□□ 2.45
RNF38-208ENST00000488058 FKBP5Q13451 457 aaPredicted RBP30.36■■■□□ 2.45
RNF38-208ENST00000488058 GRIPAP1Q4V328 841 aa30.36■■■□□ 2.45
RNF38-208ENST00000488058 PCCAP05165 728 aaPredicted RBP30.35■■■□□ 2.45
RNF38-208ENST00000488058 SF3B3Q15393 1217 aaKnown RBP30.35■■■□□ 2.45
RNF38-208ENST00000488058 DDNO94850 711 aaPredicted RBP30.34■■■□□ 2.45
RNF38-208ENST00000488058 VEGFAP15692 232 aaPredicted RBP30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms