RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 IRAK1P51617 712 aa5.92□□□□□ -1.46
HFM1-208ENST00000488023 EML3Q32P44 896 aa5.92□□□□□ -1.46
HFM1-208ENST00000488023 HDGFL1Q5TGJ6 251 aa5.92□□□□□ -1.46
HFM1-208ENST00000488023 LRRC69Q6ZNQ3 347 aa5.92□□□□□ -1.46
HFM1-208ENST00000488023 C8orf86Q6ZUL3 223 aa5.92□□□□□ -1.46
HFM1-208ENST00000488023 GLMNQ92990 594 aa5.92□□□□□ -1.46
HFM1-208ENST00000488023 SSBP4Q9BWG4 385 aaPredicted RBP5.92□□□□□ -1.46
HFM1-208ENST00000488023 PCMTD2Q9NV79 361 aa5.92□□□□□ -1.46
HFM1-208ENST00000488023 BACH1O14867 736 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 TAL1P17542 331 aaPredicted RBP5.91□□□□□ -1.46
HFM1-208ENST00000488023 MFAP1P55081 439 aaKnown RBP5.91□□□□□ -1.46
HFM1-208ENST00000488023 MICALL1Q8N3F8 863 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 UCN2Q96RP3 112 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 SLC30A3Q99726 388 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 SCHIP1Q9P0W5 487 aaPredicted RBP5.91□□□□□ -1.46
HFM1-208ENST00000488023 RNF114Q9Y508 228 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 PIK3CDO00329 1044 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 EML1O00423 815 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 RBM25P49756 843 aaKnown RBP5.91□□□□□ -1.46
HFM1-208ENST00000488023 SFSWAPQ12872 951 aaKnown RBP5.91□□□□□ -1.46
HFM1-208ENST00000488023 TEAD4Q15561 434 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 TNFRSF25Q93038 417 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 L3MBTL2Q969R5 705 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 NOD1Q9Y239 953 aa5.91□□□□□ -1.46
HFM1-208ENST00000488023 ALBP02768 609 aa5.9□□□□□ -1.47
HFM1-208ENST00000488023 NOS2P35228 1153 aa5.9□□□□□ -1.47
HFM1-208ENST00000488023 C7orf43Q8WVR3 580 aa5.9□□□□□ -1.47
HFM1-208ENST00000488023 LENG1Q96BZ8 264 aaPredicted RBP5.9□□□□□ -1.47
HFM1-208ENST00000488023 NEUROD4Q9HD90 331 aa5.9□□□□□ -1.47
HFM1-208ENST00000488023 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.89□□□□□ -1.472e-6■■■■■ 57.7
HFM1-208ENST00000488023 ZNF358Q9NW07 568 aa5.89□□□□□ -1.47
HFM1-208ENST00000488023 USP17L5A8MUK1 530 aa5.88□□□□□ -1.47
HFM1-208ENST00000488023 SRPK2P78362 688 aaKnown RBP5.88□□□□□ -1.47
HFM1-208ENST00000488023 CALR3Q96L12 384 aaKnown RBP5.88□□□□□ -1.47
HFM1-208ENST00000488023 GPC6Q9Y625 555 aaPredicted RBP5.88□□□□□ -1.47
HFM1-208ENST00000488023 ADH7P40394 386 aa5.88□□□□□ -1.47
HFM1-208ENST00000488023 EPHA4P54764 986 aa5.88□□□□□ -1.47
HFM1-208ENST00000488023 GTF2IP78347 998 aa5.88□□□□□ -1.47
HFM1-208ENST00000488023 NRG1Q02297 640 aaPredicted RBP5.88□□□□□ -1.47
HFM1-208ENST00000488023 SPEM2Q0P670 501 aa5.88□□□□□ -1.47
HFM1-208ENST00000488023 NCOA4Q13772 614 aa5.88□□□□□ -1.47
HFM1-208ENST00000488023 SHISA2Q6UWI4 295 aa5.88□□□□□ -1.47
HFM1-208ENST00000488023 C20orf204Q6ZNR8 217 aa5.88□□□□□ -1.47
HFM1-208ENST00000488023 TRIM50Q86XT4 487 aa5.88□□□□□ -1.47
HFM1-208ENST00000488023 PLEKHM2Q8IWE5 1019 aa5.88□□□□□ -1.47
HFM1-208ENST00000488023 TBCELQ5QJ74 424 aa5.87□□□□□ -1.47
HFM1-208ENST00000488023 CFAP70Q5T0N1 1121 aa5.87□□□□□ -1.47
HFM1-208ENST00000488023 TRAPPC3LQ5T215 181 aa5.87□□□□□ -1.47
HFM1-208ENST00000488023 SLC9A9Q8IVB4 645 aa5.87□□□□□ -1.47
HFM1-208ENST00000488023 ZNF232Q9UNY5 417 aa5.87□□□□□ -1.47
HFM1-208ENST00000488023 ATP9BO43861 1147 aa5.86□□□□□ -1.47
HFM1-208ENST00000488023 SSTR4P31391 388 aa5.86□□□□□ -1.47
HFM1-208ENST00000488023 NEUROD1Q13562 356 aa5.86□□□□□ -1.47
HFM1-208ENST00000488023 SH3PXD2AQ5TCZ1 1133 aa5.86□□□□□ -1.47
HFM1-208ENST00000488023 RAB44Q7Z6P3 723 aaPredicted RBP5.86□□□□□ -1.47
HFM1-208ENST00000488023 RHPN1Q8TCX5 695 aa5.86□□□□□ -1.47
HFM1-208ENST00000488023 PPP1R12CQ9BZL4 782 aa5.86□□□□□ -1.47
HFM1-208ENST00000488023 OAS3Q9Y6K5 1087 aaKnown RBP5.86□□□□□ -1.47
HFM1-208ENST00000488023 A0A0A0MRY4 1105 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 SERTM1A2A2V5 107 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 ATP1A2P50993 1020 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 JAG1P78504 1218 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 PSME1Q06323 249 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 TNS4Q8IZW8 715 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 USP17L3A6NCW0 530 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 USP17L4A6NCW7 530 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 PALM3A6NDB9 673 aaPredicted RBP5.85□□□□□ -1.47
HFM1-208ENST00000488023 USP17L2Q6R6M4 530 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 USP17L1Q7RTZ2 530 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 DEPDC4Q8N2C3 294 aa5.85□□□□□ -1.47
HFM1-208ENST00000488023 LILRB5O75023 590 aa5.84□□□□□ -1.47
HFM1-208ENST00000488023 KCNQ4P56696 695 aa5.84□□□□□ -1.47
HFM1-208ENST00000488023 C1orf53Q5VUE5 145 aa5.84□□□□□ -1.47
HFM1-208ENST00000488023 CEP63Q96MT8 703 aa5.84□□□□□ -1.47
HFM1-208ENST00000488023 BRD7Q9NPI1 651 aa5.84□□□□□ -1.47
HFM1-208ENST00000488023 TFIP11Q9UBB9 837 aaKnown RBP5.84□□□□□ -1.47
HFM1-208ENST00000488023 ANKIB1Q9P2G1 1089 aa5.83□□□□□ -1.48
HFM1-208ENST00000488023 KCNH4Q9UQ05 1017 aa5.83□□□□□ -1.48
HFM1-208ENST00000488023 SFI1A8K8P3 1242 aa5.82□□□□□ -1.48
HFM1-208ENST00000488023 CD97P48960 835 aa5.82□□□□□ -1.48
HFM1-208ENST00000488023 HSH2DQ96JZ2 352 aa5.82□□□□□ -1.48
HFM1-208ENST00000488023 HCN4Q9Y3Q4 1203 aa5.82□□□□□ -1.48
HFM1-208ENST00000488023 MAFBQ9Y5Q3 323 aaPredicted RBP5.82□□□□□ -1.48
HFM1-208ENST00000488023 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
HFM1-208ENST00000488023 LARGE2Q8N3Y3 721 aa5.82□□□□□ -1.48
HFM1-208ENST00000488023 ZNF280CQ8ND82 737 aa5.82□□□□□ -1.48
HFM1-208ENST00000488023 BHMTQ93088 406 aa5.82□□□□□ -1.48
HFM1-208ENST00000488023 MKRN1Q9UHC7 482 aaKnown RBP5.82□□□□□ -1.48
HFM1-208ENST00000488023 USP21Q9UK80 565 aa5.82□□□□□ -1.48
HFM1-208ENST00000488023 SHROOM4Q9ULL8 1493 aa5.81□□□□□ -1.48
HFM1-208ENST00000488023 ZBTB7BO15156 539 aaPredicted RBP5.81□□□□□ -1.48
HFM1-208ENST00000488023 HIRAP54198 1017 aaPredicted RBP5.81□□□□□ -1.48
HFM1-208ENST00000488023 GP2P55259 537 aaKnown RBP5.81□□□□□ -1.48
HFM1-208ENST00000488023 PSMA6P60900 246 aaKnown RBP5.81□□□□□ -1.48
HFM1-208ENST00000488023 RAC1P63000 192 aa5.81□□□□□ -1.48
HFM1-208ENST00000488023 TYRO3Q06418 890 aa5.81□□□□□ -1.48
HFM1-208ENST00000488023 KANK4Q5T7N3 995 aaPredicted RBP5.81□□□□□ -1.48
HFM1-208ENST00000488023 POTEAQ6S8J7 498 aa5.81□□□□□ -1.48
HFM1-208ENST00000488023 SUSD3Q96L08 255 aa5.81□□□□□ -1.48
HFM1-208ENST00000488023 PHACTR1Q9C0D0 580 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms