RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 LIAT1Q6ZQX7 453 aa10.59□□□□□ -0.71
NECTIN3-209ENST00000488016 TNS2Q63HR2 1409 aa10.58□□□□□ -0.72
NECTIN3-209ENST00000488016 SHANK3Q9BYB0 1731 aa10.58□□□□□ -0.72
NECTIN3-209ENST00000488016 HOXA2O43364 376 aa10.58□□□□□ -0.72
NECTIN3-209ENST00000488016 TRIM37O94972 964 aa10.58□□□□□ -0.72
NECTIN3-209ENST00000488016 IL2RBP14784 551 aa10.58□□□□□ -0.72
NECTIN3-209ENST00000488016 MSS51Q4VC12 460 aa10.58□□□□□ -0.72
NECTIN3-209ENST00000488016 FAM160A2Q8N612 972 aaPredicted RBP10.58□□□□□ -0.72
NECTIN3-209ENST00000488016 EMID1Q96A84 441 aaPredicted RBP10.58□□□□□ -0.72
NECTIN3-209ENST00000488016 FCF1Q9Y324 198 aaKnown RBP10.58□□□□□ -0.72
NECTIN3-209ENST00000488016 TNS1Q9HBL0 1735 aaKnown RBP10.58□□□□□ -0.72
NECTIN3-209ENST00000488016 BAG6P46379 1132 aa10.57□□□□□ -0.72
NECTIN3-209ENST00000488016 AMHR2Q16671 573 aa10.57□□□□□ -0.72
NECTIN3-209ENST00000488016 ZNF697Q5TEC3 545 aa10.57□□□□□ -0.72
NECTIN3-209ENST00000488016 ZNF598Q86UK7 904 aaKnown RBP10.57□□□□□ -0.72
NECTIN3-209ENST00000488016 AEBP1Q8IUX7 1158 aa10.57□□□□□ -0.72
NECTIN3-209ENST00000488016 PRDM9Q9NQV7 894 aa10.57□□□□□ -0.72
NECTIN3-209ENST00000488016 KIF24Q5T7B8 1368 aa10.56□□□□□ -0.72
NECTIN3-209ENST00000488016 SSTR3P32745 418 aaPredicted RBP10.56□□□□□ -0.72
NECTIN3-209ENST00000488016 MTHFSP49914 203 aa10.56□□□□□ -0.72
NECTIN3-209ENST00000488016 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
NECTIN3-209ENST00000488016 ACSBG1Q96GR2 724 aa10.56□□□□□ -0.72
NECTIN3-209ENST00000488016 OVOS2A0A0G2JMS6 1433 aa10.56□□□□□ -0.72
NECTIN3-209ENST00000488016 EXOC5O00471 708 aa10.55□□□□□ -0.72
NECTIN3-209ENST00000488016 DDX54Q8TDD1 881 aaKnown RBP10.55□□□□□ -0.72
NECTIN3-209ENST00000488016 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
NECTIN3-209ENST00000488016 RGPD1P0DJD0 1748 aa10.55□□□□□ -0.72
NECTIN3-209ENST00000488016 COL3A1P02461 1466 aaPredicted RBP10.55□□□□□ -0.72
NECTIN3-209ENST00000488016 SBF2Q86WG5 1849 aa10.54□□□□□ -0.72
NECTIN3-209ENST00000488016 KCNQ2O43526 872 aa10.54□□□□□ -0.72
NECTIN3-209ENST00000488016 NCAPD2Q15021 1401 aa10.54□□□□□ -0.72
NECTIN3-209ENST00000488016 FAM196AQ6ZSG2 479 aa10.54□□□□□ -0.72
NECTIN3-209ENST00000488016 HLA-CQ95604 372 aa10.54□□□□□ -0.72
NECTIN3-209ENST00000488016 USB1Q9BQ65 265 aaKnown RBP10.54□□□□□ -0.72
NECTIN3-209ENST00000488016 CDCA7Q9BWT1 371 aaPredicted RBP10.54□□□□□ -0.72
NECTIN3-209ENST00000488016 NPC1L1Q9UHC9 1359 aa10.53□□□□□ -0.72
NECTIN3-209ENST00000488016 SENP3-EIF4A1A0A087X0R7 540 aa10.53□□□□□ -0.72
NECTIN3-209ENST00000488016 IL13P35225 146 aa10.53□□□□□ -0.72
NECTIN3-209ENST00000488016 RPIAP49247 311 aa10.53□□□□□ -0.72
NECTIN3-209ENST00000488016 EZH2Q15910 746 aaKnown RBP10.53□□□□□ -0.72
NECTIN3-209ENST00000488016 GIGYF2Q6Y7W6 1299 aaKnown RBP10.53□□□□□ -0.72
NECTIN3-209ENST00000488016 TATP17735 454 aaPredicted RBP10.52□□□□□ -0.73
NECTIN3-209ENST00000488016 PPP2R1AP30153 589 aa10.52□□□□□ -0.73
NECTIN3-209ENST00000488016 ZCRB1Q8TBF4 217 aaKnown RBP10.52□□□□□ -0.73
NECTIN3-209ENST00000488016 RAPGEF4Q8WZA2 1011 aa10.52□□□□□ -0.73
NECTIN3-209ENST00000488016 AK7Q96M32 723 aa10.52□□□□□ -0.73
NECTIN3-209ENST00000488016 DOT1LQ8TEK3 1739 aa10.52□□□□□ -0.73
NECTIN3-209ENST00000488016 IGSF1Q8N6C5 1336 aa10.52□□□□□ -0.73
NECTIN3-209ENST00000488016 PKD1L3Q7Z443 1732 aa10.51□□□□□ -0.73
NECTIN3-209ENST00000488016 TOGARAM1Q9Y4F4 1720 aa10.51□□□□□ -0.73
NECTIN3-209ENST00000488016 CYP27B1O15528 508 aa10.51□□□□□ -0.73
NECTIN3-209ENST00000488016 ZBTB24O43167 697 aaPredicted RBP10.51□□□□□ -0.73
NECTIN3-209ENST00000488016 APBA3O96018 575 aa10.51□□□□□ -0.73
NECTIN3-209ENST00000488016 HMOX1P09601 288 aa10.51□□□□□ -0.73
NECTIN3-209ENST00000488016 GUCA2AQ02747 115 aa10.51□□□□□ -0.73
NECTIN3-209ENST00000488016 TRAF7Q6Q0C0 670 aa10.51□□□□□ -0.73
NECTIN3-209ENST00000488016 UTRNP46939 3433 aa10.51□□□□□ -0.73
NECTIN3-209ENST00000488016 PRR20EP86478 221 aa10.5□□□□□ -0.73
NECTIN3-209ENST00000488016 PRR20CP86479 221 aa10.5□□□□□ -0.73
NECTIN3-209ENST00000488016 PRR20DP86480 221 aa10.5□□□□□ -0.73
NECTIN3-209ENST00000488016 PRR20BP86481 221 aa10.5□□□□□ -0.73
NECTIN3-209ENST00000488016 PRR20AP86496 221 aa10.5□□□□□ -0.73
NECTIN3-209ENST00000488016 SULT6B1Q6IMI4 303 aa10.5□□□□□ -0.73
NECTIN3-209ENST00000488016 TRIM67Q6ZTA4 783 aa10.5□□□□□ -0.73
NECTIN3-209ENST00000488016 NHSQ6T4R5 1651 aa10.5□□□□□ -0.73
NECTIN3-209ENST00000488016 PARD3Q8TEW0 1356 aa10.5□□□□□ -0.73
NECTIN3-209ENST00000488016 KAT6BQ8WYB5 2073 aa10.49□□□□□ -0.73
NECTIN3-209ENST00000488016 TRIM66O15016 1216 aa10.49□□□□□ -0.73
NECTIN3-209ENST00000488016 CD2BP2O95400 341 aaKnown RBP10.49□□□□□ -0.73
NECTIN3-209ENST00000488016 MMP16P51512 607 aa10.49□□□□□ -0.73
NECTIN3-209ENST00000488016 ZNF784Q8NCA9 323 aaPredicted RBP10.49□□□□□ -0.73
NECTIN3-209ENST00000488016 SYTL4Q96C24 671 aaPredicted RBP10.49□□□□□ -0.73
NECTIN3-209ENST00000488016 TNFRSF10AO00220 468 aa10.48□□□□□ -0.73
NECTIN3-209ENST00000488016 U2SURPO15042 1029 aaKnown RBP10.48□□□□□ -0.73
NECTIN3-209ENST00000488016 DIAPH1O60610 1272 aaKnown RBP10.48□□□□□ -0.73
NECTIN3-209ENST00000488016 FDX1P10109 184 aa10.48□□□□□ -0.73
NECTIN3-209ENST00000488016 PARP9Q8IXQ6 854 aa10.48□□□□□ -0.73
NECTIN3-209ENST00000488016 SPIRE2Q8WWL2 714 aa10.48□□□□□ -0.73
NECTIN3-209ENST00000488016 CAMKK2Q96RR4 588 aa10.48□□□□□ -0.73
NECTIN3-209ENST00000488016 BTAF1O14981 1849 aa10.48□□□□□ -0.73
NECTIN3-209ENST00000488016 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
NECTIN3-209ENST00000488016 KCNQ4P56696 695 aa10.47□□□□□ -0.73
NECTIN3-209ENST00000488016 FOXC1Q12948 553 aa10.47□□□□□ -0.73
NECTIN3-209ENST00000488016 BEGAINQ9BUH8 593 aa10.47□□□□□ -0.73
NECTIN3-209ENST00000488016 PCDH11XQ9BZA7 1347 aa10.47□□□□□ -0.73
NECTIN3-209ENST00000488016 PCDH11YQ9BZA8 1340 aa10.47□□□□□ -0.73
NECTIN3-209ENST00000488016 BCL9O00512 1426 aa10.47□□□□□ -0.73
NECTIN3-209ENST00000488016 RREB1Q92766 1687 aa10.47□□□□□ -0.73
NECTIN3-209ENST00000488016 NUP188Q5SRE5 1749 aa10.47□□□□□ -0.73
NECTIN3-209ENST00000488016 GDF9O60383 454 aa10.46□□□□□ -0.73
NECTIN3-209ENST00000488016 PKDCCQ504Y2 493 aa10.46□□□□□ -0.73
NECTIN3-209ENST00000488016 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
NECTIN3-209ENST00000488016 KDRP35968 1356 aa10.46□□□□□ -0.74
NECTIN3-209ENST00000488016 C6orf229H3BNL8 230 aa10.45□□□□□ -0.74
NECTIN3-209ENST00000488016 PHKG2P15735 406 aa10.45□□□□□ -0.74
NECTIN3-209ENST00000488016 C1QTNF8P60827 252 aa10.45□□□□□ -0.74
NECTIN3-209ENST00000488016 ZNF530Q6P9A1 599 aaPredicted RBP10.45□□□□□ -0.74
NECTIN3-209ENST00000488016 PPP1R1BQ9UD71 204 aaPredicted RBP10.45□□□□□ -0.74
NECTIN3-209ENST00000488016 KDM6AO15550 1401 aaPredicted RBP10.44□□□□□ -0.74
NECTIN3-209ENST00000488016 JUNDP17535 347 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms