RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 TSPYL6Q8N831 410 aa11.98□□□□□ -0.49
LCN2-205ENST00000487719 RPGRQ92834 1020 aaKnown RBP11.98□□□□□ -0.49
LCN2-205ENST00000487719 TMX4Q9H1E5 349 aaPredicted RBP11.98□□□□□ -0.49
LCN2-205ENST00000487719 TNRC6CQ9HCJ0 1690 aaKnown RBP11.97□□□□□ -0.49
LCN2-205ENST00000487719 SH3TC1Q8TE82 1336 aa11.97□□□□□ -0.49
LCN2-205ENST00000487719 NPR1P16066 1061 aa11.97□□□□□ -0.49
LCN2-205ENST00000487719 ALDH1B1P30837 517 aa11.97□□□□□ -0.49
LCN2-205ENST00000487719 CCDC24Q8N4L8 307 aa11.97□□□□□ -0.49
LCN2-205ENST00000487719 NLRP3Q96P20 1036 aa11.97□□□□□ -0.49
LCN2-205ENST00000487719 TRMT112Q9UI30 125 aaKnown RBP11.97□□□□□ -0.49
LCN2-205ENST00000487719 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.49
LCN2-205ENST00000487719 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
LCN2-205ENST00000487719 SRGNP10124 158 aa11.96□□□□□ -0.49
LCN2-205ENST00000487719 KCNA3P22001 575 aa11.96□□□□□ -0.49
LCN2-205ENST00000487719 FKBP5Q13451 457 aaPredicted RBP11.96□□□□□ -0.49
LCN2-205ENST00000487719 ERFEQ4G0M1 354 aa11.96□□□□□ -0.49
LCN2-205ENST00000487719 SUSD4Q5VX71 490 aa11.96□□□□□ -0.49
LCN2-205ENST00000487719 NUTM1Q86Y26 1132 aa11.96□□□□□ -0.49
LCN2-205ENST00000487719 PHAXQ9H814 394 aaKnown RBP11.96□□□□□ -0.49
LCN2-205ENST00000487719 DDX60Q8IY21 1712 aaKnown RBP11.96□□□□□ -0.49
LCN2-205ENST00000487719 ZNF521Q96K83 1311 aa11.95□□□□□ -0.5
LCN2-205ENST00000487719 NTSR2O95665 410 aa11.95□□□□□ -0.5
LCN2-205ENST00000487719 NLRP10Q86W26 655 aa11.95□□□□□ -0.5
LCN2-205ENST00000487719 ZNF428Q96B54 188 aa11.95□□□□□ -0.5
LCN2-205ENST00000487719 RBM17Q96I25 401 aaKnown RBP11.95□□□□□ -0.5
LCN2-205ENST00000487719 TIAM2Q8IVF5 1701 aa11.94□□□□□ -0.5
LCN2-205ENST00000487719 VAMP4O75379 141 aa11.94□□□□□ -0.5
LCN2-205ENST00000487719 FLIIQ13045 1269 aa11.94□□□□□ -0.5
LCN2-205ENST00000487719 KSR2Q6VAB6 950 aa11.94□□□□□ -0.5
LCN2-205ENST00000487719 CCDC191Q8NCU4 936 aa11.94□□□□□ -0.5
LCN2-205ENST00000487719 MYD88Q99836 296 aa11.94□□□□□ -0.5
LCN2-205ENST00000487719 MAP3K2Q9Y2U5 619 aa11.94□□□□□ -0.5
LCN2-205ENST00000487719 ABCC12Q96J65 1359 aa11.93□□□□□ -0.5
LCN2-205ENST00000487719 ATP5J2-PTCD1G3V325 749 aa11.93□□□□□ -0.5
LCN2-205ENST00000487719 TCERG1O14776 1098 aaKnown RBP11.93□□□□□ -0.5
LCN2-205ENST00000487719 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
LCN2-205ENST00000487719 TRIM28Q13263 835 aaKnown RBP11.93□□□□□ -0.5
LCN2-205ENST00000487719 PRPF40BQ6NWY9 871 aaKnown RBP11.93□□□□□ -0.5
LCN2-205ENST00000487719 METTL22Q9BUU2 404 aaPredicted RBP11.93□□□□□ -0.5
LCN2-205ENST00000487719 CWC25Q9NXE8 425 aaPredicted RBP11.93□□□□□ -0.5
LCN2-205ENST00000487719 TAF1P21675 1872 aa11.93□□□□□ -0.5
LCN2-205ENST00000487719 KLRG2A4D1S0 409 aaPredicted RBP11.92□□□□□ -0.5
LCN2-205ENST00000487719 PI4KAP2A4QPH2 592 aa11.92□□□□□ -0.5
LCN2-205ENST00000487719 C21orf2O43822 256 aa11.92□□□□□ -0.5
LCN2-205ENST00000487719 CT47B1P0C2W7 299 aaPredicted RBP11.92□□□□□ -0.5
LCN2-205ENST00000487719 SLFN5Q08AF3 891 aa11.92□□□□□ -0.5
LCN2-205ENST00000487719 GRIPAP1Q4V328 841 aa11.92□□□□□ -0.5
LCN2-205ENST00000487719 CCDC93Q567U6 631 aa11.92□□□□□ -0.5
LCN2-205ENST00000487719 DDX46Q7L014 1031 aaKnown RBP11.92□□□□□ -0.5
LCN2-205ENST00000487719 PI4KAP1Q8N8J0 262 aa11.92□□□□□ -0.5
LCN2-205ENST00000487719 ISCA1Q9BUE6 129 aa11.92□□□□□ -0.5
LCN2-205ENST00000487719 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
LCN2-205ENST00000487719 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
LCN2-205ENST00000487719 SPEF2Q9C093 1822 aa11.91□□□□□ -0.5
LCN2-205ENST00000487719 CRY2Q49AN0 593 aa11.91□□□□□ -0.5
LCN2-205ENST00000487719 SLC10A5Q5PT55 438 aa11.91□□□□□ -0.5
LCN2-205ENST00000487719 CC2D2BQ6DHV5 1058 aa11.91□□□□□ -0.5
LCN2-205ENST00000487719 RTKN2Q8IZC4 609 aa11.91□□□□□ -0.5
LCN2-205ENST00000487719 ZBTB38Q8NAP3 1195 aaPredicted RBP11.91□□□□□ -0.5
LCN2-205ENST00000487719 DNAAF4Q8WXU2 420 aa11.91□□□□□ -0.5
LCN2-205ENST00000487719 TAOK3Q9H2K8 898 aa11.91□□□□□ -0.5
LCN2-205ENST00000487719 ZC3H4Q9UPT8 1303 aaKnown RBP11.9□□□□□ -0.5
LCN2-205ENST00000487719 IRS4O14654 1257 aaPredicted RBP11.9□□□□□ -0.5
LCN2-205ENST00000487719 LMNB1P20700 586 aa11.9□□□□□ -0.5
LCN2-205ENST00000487719 FAM89AQ96GI7 184 aa11.9□□□□□ -0.5
LCN2-205ENST00000487719 CRAMP1Q96RY5 1269 aa11.9□□□□□ -0.5
LCN2-205ENST00000487719 RNF181Q9P0P0 153 aa11.9□□□□□ -0.5
LCN2-205ENST00000487719 PPEF1O14829 653 aaPredicted RBP11.89□□□□□ -0.51
LCN2-205ENST00000487719 PCCAP05165 728 aaPredicted RBP11.89□□□□□ -0.51
LCN2-205ENST00000487719 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
LCN2-205ENST00000487719 HOXA10P31260 410 aaPredicted RBP11.89□□□□□ -0.51
LCN2-205ENST00000487719 C9orf131Q5VYM1 1079 aa11.89□□□□□ -0.51
LCN2-205ENST00000487719 TMC4Q7Z404 712 aa11.89□□□□□ -0.51
LCN2-205ENST00000487719 GPBP1L1Q9HC44 474 aaPredicted RBP11.89□□□□□ -0.51
LCN2-205ENST00000487719 ADCY9O60503 1353 aa11.89□□□□□ -0.51
LCN2-205ENST00000487719 PTPRCP08575 1304 aa11.88□□□□□ -0.51
LCN2-205ENST00000487719 ALDH1L2Q3SY69 923 aa11.88□□□□□ -0.51
LCN2-205ENST00000487719 CCDC152Q4G0S7 254 aa11.88□□□□□ -0.51
LCN2-205ENST00000487719 RTL5Q5HYW3 569 aaPredicted RBP11.88□□□□□ -0.51
LCN2-205ENST00000487719 G2E3Q7L622 706 aa11.88□□□□□ -0.51
LCN2-205ENST00000487719 ZNF784Q8NCA9 323 aaPredicted RBP11.88□□□□□ -0.51
LCN2-205ENST00000487719 LINS1Q8NG48 757 aa11.88□□□□□ -0.51
LCN2-205ENST00000487719 SMC4Q9NTJ3 1288 aa11.88□□□□□ -0.51
LCN2-205ENST00000487719 KDM2BQ8NHM5 1336 aa11.87□□□□□ -0.51
LCN2-205ENST00000487719 LTBP3Q9NS15 1303 aa11.87□□□□□ -0.51
LCN2-205ENST00000487719 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
LCN2-205ENST00000487719 PDE8AO60658 829 aa11.87□□□□□ -0.51
LCN2-205ENST00000487719 BBOX1O75936 387 aa11.87□□□□□ -0.51
LCN2-205ENST00000487719 SLC4A10Q6U841 1118 aa11.87□□□□□ -0.51
LCN2-205ENST00000487719 CDCA7LQ96GN5 454 aa11.87□□□□□ -0.51
LCN2-205ENST00000487719 ABCC4O15439 1325 aa11.86□□□□□ -0.51
LCN2-205ENST00000487719 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
LCN2-205ENST00000487719 LRRC37AA6NMS7 1700 aa11.86□□□□□ -0.51
LCN2-205ENST00000487719 FKBP4Q02790 459 aaKnown RBP eCLIP11.86□□□□□ -0.51
LCN2-205ENST00000487719 RASSF7Q02833 373 aa11.86□□□□□ -0.51
LCN2-205ENST00000487719 GRAPQ13588 217 aa11.86□□□□□ -0.51
LCN2-205ENST00000487719 SUPT20HQ8NEM7 779 aa11.86□□□□□ -0.51
LCN2-205ENST00000487719 GRAPLQ8TC17 118 aaPredicted RBP11.86□□□□□ -0.51
LCN2-205ENST00000487719 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
LCN2-205ENST00000487719 GCKRQ14397 625 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms