RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 GPC2Q8N158 579 aa11.24□□□□□ -0.61
HOXA9-204ENST00000487384 NGEFQ8N5V2 710 aa11.24□□□□□ -0.61
HOXA9-204ENST00000487384 JDP2Q8WYK2 163 aa11.24□□□□□ -0.61
HOXA9-204ENST00000487384 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
HOXA9-204ENST00000487384 MAP2K1Q02750 393 aaPredicted RBP11.23□□□□□ -0.61
HOXA9-204ENST00000487384 DCTN1Q14203 1278 aa11.23□□□□□ -0.61
HOXA9-204ENST00000487384 SLC51AQ86UW1 340 aa11.23□□□□□ -0.61
HOXA9-204ENST00000487384 NUTM1Q86Y26 1132 aa11.23□□□□□ -0.61
HOXA9-204ENST00000487384 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
HOXA9-204ENST00000487384 DDX21Q9NR30 783 aaKnown RBP eCLIP11.23□□□□□ -0.61
HOXA9-204ENST00000487384 TNRC18O15417 2968 aaPredicted RBP11.22□□□□□ -0.61
HOXA9-204ENST00000487384 LAMB4A4D0S4 1761 aa11.22□□□□□ -0.61
HOXA9-204ENST00000487384 CCDC85CA6NKD9 419 aa11.22□□□□□ -0.61
HOXA9-204ENST00000487384 LMOD1P29536 600 aaPredicted RBP11.22□□□□□ -0.61
HOXA9-204ENST00000487384 EPS15P42566 896 aa11.22□□□□□ -0.61
HOXA9-204ENST00000487384 EIF6P56537 245 aaKnown RBP11.22□□□□□ -0.61
HOXA9-204ENST00000487384 CYP4F22Q6NT55 531 aa11.22□□□□□ -0.61
HOXA9-204ENST00000487384 DLG5Q8TDM6 1919 aa11.22□□□□□ -0.61
HOXA9-204ENST00000487384 RTF1Q92541 710 aaKnown RBP11.22□□□□□ -0.61
HOXA9-204ENST00000487384 ABCC12Q96J65 1359 aa11.22□□□□□ -0.61
HOXA9-204ENST00000487384 CAPNS2Q96L46 248 aa11.22□□□□□ -0.61
HOXA9-204ENST00000487384 TSKSQ9UJT2 592 aa11.22□□□□□ -0.61
HOXA9-204ENST00000487384 SNED1Q8TER0 1413 aa11.21□□□□□ -0.61
HOXA9-204ENST00000487384 TRAF5O00463 557 aa11.21□□□□□ -0.61
HOXA9-204ENST00000487384 PSMD1Q99460 953 aa11.21□□□□□ -0.61
HOXA9-204ENST00000487384 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.61
HOXA9-204ENST00000487384 MIS18AQ9NYP9 233 aa11.21□□□□□ -0.61
HOXA9-204ENST00000487384 THSD7BQ9C0I4 1608 aa11.2□□□□□ -0.62
HOXA9-204ENST00000487384 SLC34A2O95436 690 aa11.2□□□□□ -0.62
HOXA9-204ENST00000487384 GPTP24298 496 aa11.2□□□□□ -0.62
HOXA9-204ENST00000487384 SCNN1DP51172 638 aa11.2□□□□□ -0.62
HOXA9-204ENST00000487384 LARGE2Q8N3Y3 721 aa11.2□□□□□ -0.62
HOXA9-204ENST00000487384 CCER1Q8TC90 406 aaPredicted RBP11.2□□□□□ -0.62
HOXA9-204ENST00000487384 RPGRQ92834 1020 aaKnown RBP11.2□□□□□ -0.62
HOXA9-204ENST00000487384 GPR101Q96P66 508 aaPredicted RBP11.2□□□□□ -0.62
HOXA9-204ENST00000487384 PDE4DIPQ5VU43 2346 aa11.2□□□□□ -0.62
HOXA9-204ENST00000487384 AOC2O75106 756 aa11.19□□□□□ -0.62
HOXA9-204ENST00000487384 U2AF1L5P0DN76 240 aaPredicted RBP11.19□□□□□ -0.62
HOXA9-204ENST00000487384 U2AF1Q01081 240 aaKnown RBP eCLIP11.19□□□□□ -0.62
HOXA9-204ENST00000487384 CRY2Q49AN0 593 aa11.19□□□□□ -0.62
HOXA9-204ENST00000487384 CST9Q5W186 159 aa11.19□□□□□ -0.62
HOXA9-204ENST00000487384 CFAP53Q96M91 514 aa11.19□□□□□ -0.62
HOXA9-204ENST00000487384 CFAP44Q96MT7 982 aa11.19□□□□□ -0.62
HOXA9-204ENST00000487384 NYXQ9GZU5 481 aa11.19□□□□□ -0.62
HOXA9-204ENST00000487384 RRP7AQ9Y3A4 280 aaKnown RBP11.19□□□□□ -0.62
HOXA9-204ENST00000487384 POLR2AP24928 1970 aaKnown RBP11.19□□□□□ -0.62
HOXA9-204ENST00000487384 ECE1P42892 770 aa11.18□□□□□ -0.62
HOXA9-204ENST00000487384 MLLT1Q03111 559 aaPredicted RBP11.18□□□□□ -0.62
HOXA9-204ENST00000487384 TTLL7Q6ZT98 887 aa11.18□□□□□ -0.62
HOXA9-204ENST00000487384 NPC1L1Q9UHC9 1359 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 TAF1P21675 1872 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 UBN2Q6ZU65 1347 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 PPEF1O14829 653 aaPredicted RBP11.17□□□□□ -0.62
HOXA9-204ENST00000487384 RGL2O15211 777 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 PPIP5K2O43314 1243 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 MYL6BP14649 208 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 TAF7Q15545 349 aaPredicted RBP11.17□□□□□ -0.62
HOXA9-204ENST00000487384 CC2D2BQ6DHV5 1058 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 USP50Q70EL3 339 aaPredicted RBP11.17□□□□□ -0.62
HOXA9-204ENST00000487384 NIM1KQ8IY84 436 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 ZBTB3Q9H5J0 574 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 NUDCQ9Y266 331 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 KDM3BQ7LBC6 1761 aa11.17□□□□□ -0.62
HOXA9-204ENST00000487384 MAP3K15Q6ZN16 1313 aa11.16□□□□□ -0.62
HOXA9-204ENST00000487384 HOXA10P31260 410 aaPredicted RBP11.16□□□□□ -0.62
HOXA9-204ENST00000487384 AOC3Q16853 763 aa11.16□□□□□ -0.62
HOXA9-204ENST00000487384 SUSD4Q5VX71 490 aa11.16□□□□□ -0.62
HOXA9-204ENST00000487384 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
HOXA9-204ENST00000487384 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
HOXA9-204ENST00000487384 RBM17Q96I25 401 aaKnown RBP11.16□□□□□ -0.62
HOXA9-204ENST00000487384 TLL2Q9Y6L7 1015 aa11.16□□□□□ -0.62
HOXA9-204ENST00000487384 LAMB2P55268 1798 aa11.16□□□□□ -0.62
HOXA9-204ENST00000487384 ERVV-1B6SEH8 477 aa11.15□□□□□ -0.62
HOXA9-204ENST00000487384 CELF2O95319 508 aaKnown RBP11.15□□□□□ -0.62
HOXA9-204ENST00000487384 GLIS2Q9BZE0 524 aaPredicted RBP11.15□□□□□ -0.62
HOXA9-204ENST00000487384 ZNF408Q9H9D4 720 aa11.15□□□□□ -0.62
HOXA9-204ENST00000487384 ADARB2Q9NS39 739 aaKnown RBP11.15□□□□□ -0.62
HOXA9-204ENST00000487384 GPRC5DQ9NZD1 345 aa11.15□□□□□ -0.62
HOXA9-204ENST00000487384 CXCL9Q07325 125 aa11.14□□□□□ -0.63
HOXA9-204ENST00000487384 SAPCD2Q86UD0 394 aa11.14□□□□□ -0.63
HOXA9-204ENST00000487384 CRAMP1Q96RY5 1269 aa11.14□□□□□ -0.63
HOXA9-204ENST00000487384 MCOLN1Q9GZU1 580 aa11.14□□□□□ -0.63
HOXA9-204ENST00000487384 RIC1Q4ADV7 1423 aa11.14□□□□□ -0.63
HOXA9-204ENST00000487384 HTATSF1O43719 755 aaKnown RBP11.13□□□□□ -0.63
HOXA9-204ENST00000487384 NTSR2O95665 410 aa11.13□□□□□ -0.63
HOXA9-204ENST00000487384 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
HOXA9-204ENST00000487384 MAP2K2P36507 400 aa11.13□□□□□ -0.63
HOXA9-204ENST00000487384 RGS19P49795 217 aa11.13□□□□□ -0.63
HOXA9-204ENST00000487384 GMPSP49915 693 aaPredicted RBP11.13□□□□□ -0.63
HOXA9-204ENST00000487384 GRIPAP1Q4V328 841 aa11.13□□□□□ -0.63
HOXA9-204ENST00000487384 THUMPD2Q9BTF0 503 aaKnown RBP11.13□□□□□ -0.63
HOXA9-204ENST00000487384 TMX4Q9H1E5 349 aaPredicted RBP11.13□□□□□ -0.63
HOXA9-204ENST00000487384 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
HOXA9-204ENST00000487384 RAD17O75943 681 aa11.12□□□□□ -0.63
HOXA9-204ENST00000487384 EIF4A1P60842 406 aaKnown RBP11.12□□□□□ -0.63
HOXA9-204ENST00000487384 CIAPIN1Q6FI81 312 aa11.12□□□□□ -0.63
HOXA9-204ENST00000487384 ZNF34Q8IZ26 560 aa11.12□□□□□ -0.63
HOXA9-204ENST00000487384 NLRP3Q96P20 1036 aa11.12□□□□□ -0.63
HOXA9-204ENST00000487384 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
HOXA9-204ENST00000487384 ZNRF3Q9ULT6 936 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms