RNA–Protein interactions for RNA: ENST00000487202.5

WDR3-204, Transcript of WD repeat domain 3, human

TSL 3

Gene WDR3, Length 680 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR3-204	ENST00000487202	PRDM10	Q9NQV6	1147 aa		11.86	□□□□□ -0.51
WDR3-204	ENST00000487202	PRAMEF22	A3QJZ6	481 aa		11.85	□□□□□ -0.51
WDR3-204	ENST00000487202	TMEM88B	A6NKF7	163 aa		11.85	□□□□□ -0.51
WDR3-204	ENST00000487202	PIP4K2A	P48426	406 aa	Predicted RBP	11.85	□□□□□ -0.51
WDR3-204	ENST00000487202	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.85	□□□□□ -0.51
WDR3-204	ENST00000487202	RSPH6A	Q9H0K4	717 aa		11.85	□□□□□ -0.51
WDR3-204	ENST00000487202	HACL1	Q9UJ83	578 aa		11.85	□□□□□ -0.51
WDR3-204	ENST00000487202	ALDH1B1	P30837	517 aa		11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	CTCF	P49711	727 aa	Predicted RBP	11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	VEGFB	P49765	207 aa		11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	CNGB1	Q14028	1251 aa	Predicted RBP	11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	EAPP	Q56P03	285 aa	Predicted RBP	11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	CHRDL2	Q6WN34	429 aa		11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	RTF1	Q92541	710 aa	Known RBP	11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	CFAP53	Q96M91	514 aa		11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	NUDC	Q9Y266	331 aa		11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	ZNF541	Q9H0D2	1346 aa		11.84	□□□□□ -0.51
WDR3-204	ENST00000487202	NBPF26	B4DH59	902 aa		11.83	□□□□□ -0.52
WDR3-204	ENST00000487202	FZD9	O00144	591 aa		11.83	□□□□□ -0.52
WDR3-204	ENST00000487202	EPHX2	P34913	555 aa		11.83	□□□□□ -0.52
WDR3-204	ENST00000487202	NBPF10	Q6P3W6	841 aa	Known RBP	11.83	□□□□□ -0.52
WDR3-204	ENST00000487202	PNMA8A	Q86V59	439 aa	Predicted RBP	11.83	□□□□□ -0.52
WDR3-204	ENST00000487202	NBPF15	Q8N660	670 aa		11.83	□□□□□ -0.52
WDR3-204	ENST00000487202	AIDA	Q96BJ3	306 aa		11.83	□□□□□ -0.52
WDR3-204	ENST00000487202	RIOK3	O14730	519 aa	Known RBP	11.82	□□□□□ -0.52
WDR3-204	ENST00000487202	HTATSF1	O43719	755 aa	Known RBP	11.82	□□□□□ -0.52
WDR3-204	ENST00000487202	IARS	P41252	1262 aa	Known RBP	11.82	□□□□□ -0.52
WDR3-204	ENST00000487202	FXR2	P51116	673 aa	Known RBP eCLIP	11.82	□□□□□ -0.52	2e-6	■■■■□ 24.4
WDR3-204	ENST00000487202	OLFM4	Q6UX06	510 aa		11.82	□□□□□ -0.52
WDR3-204	ENST00000487202	MCM10	Q7L590	875 aa		11.82	□□□□□ -0.52
WDR3-204	ENST00000487202	SYNE4	Q8N205	404 aa		11.82	□□□□□ -0.52
WDR3-204	ENST00000487202	WBP1L	Q9NX94	342 aa		11.82	□□□□□ -0.52
WDR3-204	ENST00000487202	ADAMTSL1	Q8N6G6	1762 aa		11.82	□□□□□ -0.52
WDR3-204	ENST00000487202	RASSF10	A6NK89	507 aa		11.81	□□□□□ -0.52
WDR3-204	ENST00000487202	FAM177B	A6PVY3	158 aa		11.81	□□□□□ -0.52
WDR3-204	ENST00000487202	GTF2E1	P29083	439 aa	Predicted RBP	11.81	□□□□□ -0.52
WDR3-204	ENST00000487202	HLF	Q16534	295 aa		11.81	□□□□□ -0.52
WDR3-204	ENST00000487202	DEFB115	Q30KQ5	88 aa		11.81	□□□□□ -0.52
WDR3-204	ENST00000487202	CNTROB	Q8N137	903 aa		11.81	□□□□□ -0.52
WDR3-204	ENST00000487202	GPC2	Q8N158	579 aa		11.81	□□□□□ -0.52
WDR3-204	ENST00000487202	PSMD1	Q99460	953 aa		11.81	□□□□□ -0.52
WDR3-204	ENST00000487202	RNF123	Q5XPI4	1314 aa		11.81	□□□□□ -0.52
WDR3-204	ENST00000487202	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.8	□□□□□ -0.52
WDR3-204	ENST00000487202	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
WDR3-204	ENST00000487202	TAF7	Q15545	349 aa	Predicted RBP	11.8	□□□□□ -0.52
WDR3-204	ENST00000487202	CRY2	Q49AN0	593 aa		11.8	□□□□□ -0.52
WDR3-204	ENST00000487202	MAP1S	Q66K74	1059 aa	Predicted RBP	11.8	□□□□□ -0.52
WDR3-204	ENST00000487202	CC2D2B	Q6DHV5	1058 aa		11.8	□□□□□ -0.52
WDR3-204	ENST00000487202	JDP2	Q8WYK2	163 aa		11.8	□□□□□ -0.52
WDR3-204	ENST00000487202	NYX	Q9GZU5	481 aa		11.8	□□□□□ -0.52
WDR3-204	ENST00000487202	NUP98	P52948	1817 aa		11.79	□□□□□ -0.52
WDR3-204	ENST00000487202	ERVV-1	B6SEH8	477 aa		11.79	□□□□□ -0.52
WDR3-204	ENST00000487202	LBX1	P52954	281 aa		11.79	□□□□□ -0.52
WDR3-204	ENST00000487202	DCTN1	Q14203	1278 aa		11.79	□□□□□ -0.52
WDR3-204	ENST00000487202	SNED1	Q8TER0	1413 aa		11.78	□□□□□ -0.52
WDR3-204	ENST00000487202	HOXA10	P31260	410 aa	Predicted RBP	11.78	□□□□□ -0.52
WDR3-204	ENST00000487202	EIF6	P56537	245 aa	Known RBP	11.78	□□□□□ -0.52
WDR3-204	ENST00000487202	MAP2K1	Q02750	393 aa	Predicted RBP	11.78	□□□□□ -0.52
WDR3-204	ENST00000487202	GRIPAP1	Q4V328	841 aa		11.78	□□□□□ -0.52
WDR3-204	ENST00000487202	PIP4P2	Q8N4L2	257 aa		11.78	□□□□□ -0.52
WDR3-204	ENST00000487202	WDR33	Q9C0J8	1336 aa	Known RBP	11.78	□□□□□ -0.52
WDR3-204	ENST00000487202	LMOD1	P29536	600 aa	Predicted RBP	11.77	□□□□□ -0.53
WDR3-204	ENST00000487202	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
WDR3-204	ENST00000487202	LAMB4	A4D0S4	1761 aa		11.77	□□□□□ -0.53
WDR3-204	ENST00000487202	HSPA8	P11142	646 aa	Known RBP	11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	PPP2R1A	P30153	589 aa		11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	NUTM1	Q86Y26	1132 aa		11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	HS6ST3	Q8IZP7	471 aa		11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	NGEF	Q8N5V2	710 aa		11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	PNISR	Q8TF01	805 aa	Known RBP	11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	RPGR	Q92834	1020 aa	Known RBP	11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	MIS18A	Q9NYP9	233 aa		11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	ABT1	Q9ULW3	272 aa	Known RBP	11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	GJA3	Q9Y6H8	435 aa		11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	MAP3K15	Q6ZN16	1313 aa		11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	ABCC12	Q96J65	1359 aa		11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	TRPM7	Q96QT4	1865 aa		11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	RIC1	Q4ADV7	1423 aa		11.76	□□□□□ -0.53
WDR3-204	ENST00000487202	CHRM1	P11229	460 aa	Predicted RBP	11.75	□□□□□ -0.53
WDR3-204	ENST00000487202	USP50	Q70EL3	339 aa	Predicted RBP	11.75	□□□□□ -0.53
WDR3-204	ENST00000487202	LARGE2	Q8N3Y3	721 aa		11.75	□□□□□ -0.53
WDR3-204	ENST00000487202	RBM17	Q96I25	401 aa	Known RBP	11.75	□□□□□ -0.53
WDR3-204	ENST00000487202	CRAMP1	Q96RY5	1269 aa		11.75	□□□□□ -0.53
WDR3-204	ENST00000487202	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.75	□□□□□ -0.53
WDR3-204	ENST00000487202	COL4A5	P29400	1685 aa		11.75	□□□□□ -0.53
WDR3-204	ENST00000487202	EPS15	P42566	896 aa		11.74	□□□□□ -0.53
WDR3-204	ENST00000487202	ECE1	P42892	770 aa		11.74	□□□□□ -0.53
WDR3-204	ENST00000487202	SCNN1D	P51172	638 aa		11.74	□□□□□ -0.53
WDR3-204	ENST00000487202	KIF6	Q6ZMV9	814 aa		11.74	□□□□□ -0.53
WDR3-204	ENST00000487202	TTLL7	Q6ZT98	887 aa		11.74	□□□□□ -0.53
WDR3-204	ENST00000487202	SPRYD3	Q8NCJ5	442 aa		11.74	□□□□□ -0.53
WDR3-204	ENST00000487202	RRP7A	Q9Y3A4	280 aa	Known RBP	11.74	□□□□□ -0.53
WDR3-204	ENST00000487202	LTBP1	Q14766	1721 aa		11.74	□□□□□ -0.53
WDR3-204	ENST00000487202	DLG5	Q8TDM6	1919 aa		11.74	□□□□□ -0.53
WDR3-204	ENST00000487202	STK25	O00506	426 aa		11.73	□□□□□ -0.53
WDR3-204	ENST00000487202	PPEF1	O14829	653 aa	Predicted RBP	11.73	□□□□□ -0.53
WDR3-204	ENST00000487202	NEFM	P07197	916 aa		11.73	□□□□□ -0.53
WDR3-204	ENST00000487202	GPT	P24298	496 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms