RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 INPP5BP32019 993 aa8.27□□□□□ -1.09
PRPF38A-203ENST00000487160 ARSDP51689 593 aa8.27□□□□□ -1.09
PRPF38A-203ENST00000487160 ALKBH8Q96BT7 664 aaKnown RBP8.27□□□□□ -1.09
PRPF38A-203ENST00000487160 CRISPLD1Q9H336 500 aa8.27□□□□□ -1.09
PRPF38A-203ENST00000487160 GJA3Q9Y6H8 435 aa8.27□□□□□ -1.09
PRPF38A-203ENST00000487160 CMTR1Q8N1G2 835 aaKnown RBP8.26□□□□□ -1.09
PRPF38A-203ENST00000487160 TTC16Q8NEE8 873 aa8.26□□□□□ -1.09
PRPF38A-203ENST00000487160 CEP63Q96MT8 703 aa8.26□□□□□ -1.09
PRPF38A-203ENST00000487160 RTCBQ9Y3I0 505 aaKnown RBP8.26□□□□□ -1.09
PRPF38A-203ENST00000487160 SENP3-EIF4A1A0A087X0R7 540 aa8.25□□□□□ -1.09
PRPF38A-203ENST00000487160 LDHBP07195 334 aaKnown RBP8.25□□□□□ -1.09
PRPF38A-203ENST00000487160 LAPTM4AQ15012 233 aa8.25□□□□□ -1.09
PRPF38A-203ENST00000487160 PGBD3Q8N328 593 aa8.25□□□□□ -1.09
PRPF38A-203ENST00000487160 WWC3Q9ULE0 1092 aa8.25□□□□□ -1.09
PRPF38A-203ENST00000487160 RPLP1P05386 114 aaKnown RBP8.24□□□□□ -1.09
PRPF38A-203ENST00000487160 TYRO3Q06418 890 aa8.24□□□□□ -1.09
PRPF38A-203ENST00000487160 ORC1Q13415 861 aa8.24□□□□□ -1.09
PRPF38A-203ENST00000487160 GRNP28799 593 aaKnown RBP8.23□□□□□ -1.09
PRPF38A-203ENST00000487160 TRIP4Q15650 581 aaPredicted RBP8.23□□□□□ -1.09
PRPF38A-203ENST00000487160 SETDB2Q96T68 719 aa8.23□□□□□ -1.09
PRPF38A-203ENST00000487160 KCNMB2Q9Y691 235 aa8.23□□□□□ -1.09
PRPF38A-203ENST00000487160 PNMA6FA0A0J9YX94 578 aa8.22□□□□□ -1.09
PRPF38A-203ENST00000487160 UBAP1LF5GYI3 381 aa8.22□□□□□ -1.09
PRPF38A-203ENST00000487160 PTSQ03393 145 aa8.22□□□□□ -1.09
PRPF38A-203ENST00000487160 ENOX2Q16206 610 aaKnown RBP8.22□□□□□ -1.09
PRPF38A-203ENST00000487160 RIPOR1Q6ZS17 1223 aa8.22□□□□□ -1.09
PRPF38A-203ENST00000487160 NLRP8Q86W28 1048 aa8.22□□□□□ -1.09
PRPF38A-203ENST00000487160 ZCCHC2Q9C0B9 1178 aaKnown RBP8.22□□□□□ -1.09
PRPF38A-203ENST00000487160 RNF19AQ9NV58 838 aa8.22□□□□□ -1.09
PRPF38A-203ENST00000487160 FNDC3AQ9Y2H6 1198 aaKnown RBP8.22□□□□□ -1.09
PRPF38A-203ENST00000487160 EPB42P16452 691 aa8.21□□□□□ -1.1
PRPF38A-203ENST00000487160 ATP2B2Q01814 1243 aa8.21□□□□□ -1.1
PRPF38A-203ENST00000487160 EFHC2Q5JST6 749 aa8.21□□□□□ -1.1
PRPF38A-203ENST00000487160 XKR5Q6UX68 686 aa8.21□□□□□ -1.1
PRPF38A-203ENST00000487160 CSRNP1Q96S65 589 aa8.21□□□□□ -1.1
PRPF38A-203ENST00000487160 DUSP9Q99956 384 aaKnown RBP8.21□□□□□ -1.1
PRPF38A-203ENST00000487160 BRD7Q9NPI1 651 aa8.21□□□□□ -1.1
PRPF38A-203ENST00000487160 PARP2Q9UGN5 583 aa8.21□□□□□ -1.1
PRPF38A-203ENST00000487160 SLC35F4A4IF30 521 aa8.2□□□□□ -1.1
PRPF38A-203ENST00000487160 EIF1AYO14602 144 aaKnown RBP8.2□□□□□ -1.1
PRPF38A-203ENST00000487160 PRPF40AO75400 957 aaKnown RBP8.2□□□□□ -1.1
PRPF38A-203ENST00000487160 NEFLP07196 543 aa8.2□□□□□ -1.1
PRPF38A-203ENST00000487160 THBS1P07996 1170 aa8.2□□□□□ -1.1
PRPF38A-203ENST00000487160 XPCQ01831 940 aaPredicted RBP8.2□□□□□ -1.1
PRPF38A-203ENST00000487160 SAMD5Q5TGI4 173 aa8.2□□□□□ -1.1
PRPF38A-203ENST00000487160 ZNF438Q7Z4V0 828 aa8.2□□□□□ -1.1
PRPF38A-203ENST00000487160 FOXD3Q9UJU5 478 aaPredicted RBP8.2□□□□□ -1.1
PRPF38A-203ENST00000487160 XYLBO75191 536 aa8.19□□□□□ -1.1
PRPF38A-203ENST00000487160 TNFRSF21O75509 655 aa8.19□□□□□ -1.1
PRPF38A-203ENST00000487160 FGD1P98174 961 aa8.19□□□□□ -1.1
PRPF38A-203ENST00000487160 LBRQ14739 615 aaKnown RBP8.19□□□□□ -1.1
PRPF38A-203ENST00000487160 PDE12Q6L8Q7 609 aaKnown RBP8.19□□□□□ -1.1
PRPF38A-203ENST00000487160 FAM161BQ96MY7 647 aa8.19□□□□□ -1.1
PRPF38A-203ENST00000487160 ELP3Q9H9T3 547 aa8.19□□□□□ -1.1
PRPF38A-203ENST00000487160 ATXN7O15265 892 aaPredicted RBP8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 VAMP1P23763 118 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 SFSWAPQ12872 951 aaKnown RBP8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 DBN1Q16643 649 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 ALG1LQ6GMV1 187 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 CCDC155Q8N6L0 562 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 CFHR5Q9BXR6 569 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 BCL11AQ9H165 835 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 NUCKS1Q9H1E3 243 aaKnown RBP8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 DNAJC25Q9H1X3 360 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 SENP2Q9HC62 589 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 CUEDC1Q9NWM3 386 aaPredicted RBP8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 TMEM63CQ9P1W3 806 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 KCNH4Q9UQ05 1017 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 PCDHGC4Q9Y5F7 938 aa8.18□□□□□ -1.1
PRPF38A-203ENST00000487160 KHNYNO15037 678 aaKnown RBP8.17□□□□□ -1.1
PRPF38A-203ENST00000487160 CPNE3O75131 537 aaKnown RBP8.17□□□□□ -1.1
PRPF38A-203ENST00000487160 UBAP2LQ14157 1087 aaKnown RBP8.17□□□□□ -1.1
PRPF38A-203ENST00000487160 USPL1Q5W0Q7 1092 aa8.17□□□□□ -1.1
PRPF38A-203ENST00000487160 FIGNL1Q6PIW4 674 aa8.17□□□□□ -1.1
PRPF38A-203ENST00000487160 KIFC2Q96AC6 838 aa8.17□□□□□ -1.1
PRPF38A-203ENST00000487160 IRX2Q9BZI1 471 aaPredicted RBP8.17□□□□□ -1.1
PRPF38A-203ENST00000487160 IGSF5Q9NSI5 407 aa8.17□□□□□ -1.1
PRPF38A-203ENST00000487160 GMPR2Q9P2T1 348 aaKnown RBP8.17□□□□□ -1.1
PRPF38A-203ENST00000487160 DCDC2BA2VCK2 349 aa8.16□□□□□ -1.1
PRPF38A-203ENST00000487160 EGFRP00533 1210 aa8.16□□□□□ -1.1
PRPF38A-203ENST00000487160 FAM157BP0CG42 384 aa8.16□□□□□ -1.1
PRPF38A-203ENST00000487160 KCNQ4P56696 695 aa8.16□□□□□ -1.1
PRPF38A-203ENST00000487160 MRPL58Q14197 206 aaKnown RBP8.16□□□□□ -1.1
PRPF38A-203ENST00000487160 SNX29Q8TEQ0 813 aa8.16□□□□□ -1.1
PRPF38A-203ENST00000487160 TRIM47Q96LD4 638 aa8.16□□□□□ -1.1
PRPF38A-203ENST00000487160 C11orf16Q9NQ32 467 aa8.16□□□□□ -1.1
PRPF38A-203ENST00000487160 H7C1W4 665 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 EFSO43281 561 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 PHACTR2O75167 634 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 SASH3O75995 380 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 RECKO95980 971 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 DAB2P98082 770 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 TNP2Q05952 138 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 PSMD2Q13200 908 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 TSNAXIP1Q2TAA8 658 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 TMC4Q7Z404 712 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 NLRP13Q86W25 1043 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 TRIM22Q8IYM9 498 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 FBF1Q8TES7 1133 aa8.15□□□□□ -1.1
PRPF38A-203ENST00000487160 BACH2Q9BYV9 841 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms