RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 K7ELQ4 463 aaPredicted RBP9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L24Q0WX57 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 DPYDQ12882 1025 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 KANK4Q5T7N3 995 aaPredicted RBP9.02□□□□□ -0.97
SMC4-218ENST00000486711 CD163Q86VB7 1156 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 NGLY1Q96IV0 654 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 SPATA31C1P0DKV0 1188 aa9.01□□□□□ -0.97
SMC4-218ENST00000486711 ADH7P40394 386 aa9.01□□□□□ -0.97
SMC4-218ENST00000486711 BTLAQ7Z6A9 289 aa9.01□□□□□ -0.97
SMC4-218ENST00000486711 RAB44Q7Z6P3 723 aaPredicted RBP9.01□□□□□ -0.97
SMC4-218ENST00000486711 VRTNQ9H8Y1 702 aa9.01□□□□□ -0.97
SMC4-218ENST00000486711 IGFBP4P22692 258 aa9□□□□□ -0.97
SMC4-218ENST00000486711 LMOD1P29536 600 aaPredicted RBP9□□□□□ -0.97
SMC4-218ENST00000486711 CHRNA4P43681 627 aa9□□□□□ -0.97
SMC4-218ENST00000486711 RTN1Q16799 776 aa9□□□□□ -0.97
SMC4-218ENST00000486711 IER5Q5VY09 327 aa9□□□□□ -0.97
SMC4-218ENST00000486711 ANKMY2Q8IV38 441 aa9□□□□□ -0.97
SMC4-218ENST00000486711 M0R082 166 aa8.99□□□□□ -0.97
SMC4-218ENST00000486711 PRRT3Q5FWE3 981 aa8.99□□□□□ -0.97
SMC4-218ENST00000486711 ZNF417Q8TAU3 575 aa8.99□□□□□ -0.97
SMC4-218ENST00000486711 ZNF587Q96SQ5 575 aaPredicted RBP8.99□□□□□ -0.97
SMC4-218ENST00000486711 EFCC1Q9HA90 598 aa8.99□□□□□ -0.97
SMC4-218ENST00000486711 PRDM6Q9NQX0 595 aa8.99□□□□□ -0.97
SMC4-218ENST00000486711 BHMTQ93088 406 aa8.98□□□□□ -0.97
SMC4-218ENST00000486711 STARD13Q9Y3M8 1113 aa8.98□□□□□ -0.97
SMC4-218ENST00000486711 TGFBR3LH3BV60 316 aa8.97□□□□□ -0.97
SMC4-218ENST00000486711 ALBP02768 609 aa8.97□□□□□ -0.97
SMC4-218ENST00000486711 MICALL1Q8N3F8 863 aa8.97□□□□□ -0.97
SMC4-218ENST00000486711 FURINP09958 794 aa8.96□□□□□ -0.98
SMC4-218ENST00000486711 UBE2OQ9C0C9 1292 aaKnown RBP8.96□□□□□ -0.98
SMC4-218ENST00000486711 LGR5O75473 907 aa8.95□□□□□ -0.98
SMC4-218ENST00000486711 FOXO3O43524 673 aa8.94□□□□□ -0.98
SMC4-218ENST00000486711 APBA3O96018 575 aa8.94□□□□□ -0.98
SMC4-218ENST00000486711 EPB42P16452 691 aa8.94□□□□□ -0.98
SMC4-218ENST00000486711 TBC1D8BQ0IIM8 1120 aa8.94□□□□□ -0.98
SMC4-218ENST00000486711 COL9A3Q14050 684 aaPredicted RBP8.94□□□□□ -0.98
SMC4-218ENST00000486711 PNMA5Q96PV4 448 aa8.94□□□□□ -0.98
SMC4-218ENST00000486711 ARXQ96QS3 562 aa8.94□□□□□ -0.98
SMC4-218ENST00000486711 NID1P14543 1247 aa8.93□□□□□ -0.98
SMC4-218ENST00000486711 GATA4P43694 442 aa8.93□□□□□ -0.98
SMC4-218ENST00000486711 CFAP70Q5T0N1 1121 aa8.93□□□□□ -0.98
SMC4-218ENST00000486711 C20orf204Q6ZNR8 217 aa8.93□□□□□ -0.98
SMC4-218ENST00000486711 C8orf86Q6ZUL3 223 aa8.93□□□□□ -0.98
SMC4-218ENST00000486711 VTI1AQ96AJ9 217 aa8.93□□□□□ -0.98
SMC4-218ENST00000486711 LILRB5O75023 590 aa8.92□□□□□ -0.98
SMC4-218ENST00000486711 TRIM28Q13263 835 aaKnown RBP8.92□□□□□ -0.98
SMC4-218ENST00000486711 CCINQ13939 588 aa8.92□□□□□ -0.98
SMC4-218ENST00000486711 FAM200AQ8TCP9 573 aa8.92□□□□□ -0.98
SMC4-218ENST00000486711 NACC1Q96RE7 527 aa8.92□□□□□ -0.98
SMC4-218ENST00000486711 GSX2Q9BZM3 304 aa8.92□□□□□ -0.98
SMC4-218ENST00000486711 DMGDHQ9UI17 866 aaKnown RBP8.92□□□□□ -0.98
SMC4-218ENST00000486711 SLC6A14Q9UN76 642 aa8.92□□□□□ -0.98
SMC4-218ENST00000486711 BCS1LQ9Y276 419 aa8.92□□□□□ -0.98
SMC4-218ENST00000486711 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.92□□□□□ -0.98
SMC4-218ENST00000486711 WEE1P30291 646 aa8.91□□□□□ -0.98
SMC4-218ENST00000486711 ZMYND15Q9H091 742 aa8.91□□□□□ -0.98
SMC4-218ENST00000486711 IGFLR1Q9H665 355 aa8.91□□□□□ -0.98
SMC4-218ENST00000486711 ZNF777Q9ULD5 760 aaPredicted RBP8.91□□□□□ -0.98
SMC4-218ENST00000486711 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
SMC4-218ENST00000486711 NFKB1P19838 968 aa8.9□□□□□ -0.98
SMC4-218ENST00000486711 IDH3AP50213 366 aa8.9□□□□□ -0.98
SMC4-218ENST00000486711 DGKZQ13574 1117 aa8.9□□□□□ -0.98
SMC4-218ENST00000486711 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.9□□□□□ -0.986e-8■■■■■ 55.9
SMC4-218ENST00000486711 DNAJB12Q9NXW2 375 aaKnown RBP8.9□□□□□ -0.98
SMC4-218ENST00000486711 KLK14Q9P0G3 267 aa8.9□□□□□ -0.98
SMC4-218ENST00000486711 RFX1P22670 979 aa8.89□□□□□ -0.99
SMC4-218ENST00000486711 ARSDP51689 593 aa8.89□□□□□ -0.99
SMC4-218ENST00000486711 DOC2BQ14184 412 aa8.89□□□□□ -0.99
SMC4-218ENST00000486711 MYO19Q96H55 970 aa8.89□□□□□ -0.99
SMC4-218ENST00000486711 QTRT2Q9H974 415 aaKnown RBP8.89□□□□□ -0.99
SMC4-218ENST00000486711 JPH1Q9HDC5 661 aaPredicted RBP8.89□□□□□ -0.99
SMC4-218ENST00000486711 INPP5BP32019 993 aa8.88□□□□□ -0.99
SMC4-218ENST00000486711 PCSK7Q16549 785 aa8.88□□□□□ -0.99
SMC4-218ENST00000486711 TRAPPC3LQ5T215 181 aa8.88□□□□□ -0.99
SMC4-218ENST00000486711 C11orf16Q9NQ32 467 aa8.88□□□□□ -0.99
SMC4-218ENST00000486711 SUPT5HO00267 1087 aaKnown RBP8.87□□□□□ -0.99
SMC4-218ENST00000486711 C11orf91Q3C1V1 193 aa8.87□□□□□ -0.99
SMC4-218ENST00000486711 NOVA2Q9UNW9 492 aaKnown RBP8.87□□□□□ -0.99
SMC4-218ENST00000486711 GRNP28799 593 aaKnown RBP8.86□□□□□ -0.99
SMC4-218ENST00000486711 CDCA8Q53HL2 280 aa8.86□□□□□ -0.99
SMC4-218ENST00000486711 PSAPL1Q6NUJ1 521 aa8.86□□□□□ -0.99
SMC4-218ENST00000486711 NUDT8Q8WV74 236 aa8.86□□□□□ -0.99
SMC4-218ENST00000486711 MICAL2O94851 1124 aa8.85□□□□□ -0.99
SMC4-218ENST00000486711 MAP3K6O95382 1288 aa8.85□□□□□ -0.99
SMC4-218ENST00000486711 RAC1P63000 192 aa8.85□□□□□ -0.99
SMC4-218ENST00000486711 GRIK4Q16099 956 aa8.85□□□□□ -0.99
SMC4-218ENST00000486711 NAGPAQ9UK23 515 aa8.85□□□□□ -0.99
SMC4-218ENST00000486711 A0A0A0MRY4 1105 aa8.84□□□□□ -0.99
SMC4-218ENST00000486711 C9orf172C9J069 976 aa8.84□□□□□ -0.99
SMC4-218ENST00000486711 RGS9O75916 674 aaPredicted RBP8.84□□□□□ -0.99
SMC4-218ENST00000486711 SWI5Q1ZZU3 235 aa8.84□□□□□ -0.99
SMC4-218ENST00000486711 SEMA6BQ9H3T3 888 aa8.84□□□□□ -0.99
SMC4-218ENST00000486711 ELNP15502 786 aa8.83□□□□□ -1
SMC4-218ENST00000486711 AFF1P51825 1210 aaKnown RBP8.83□□□□□ -1
SMC4-218ENST00000486711 KRT25Q7Z3Z0 450 aa8.83□□□□□ -1
SMC4-218ENST00000486711 FAM35AQ86V20 835 aa8.83□□□□□ -1
SMC4-218ENST00000486711 ACIN1Q9UKV3 1341 aaKnown RBP8.82□□□□□ -1
SMC4-218ENST00000486711 RARAP10276 462 aa8.82□□□□□ -1
SMC4-218ENST00000486711 ARID4AP29374 1257 aaPredicted RBP8.82□□□□□ -1
SMC4-218ENST00000486711 ELOAQ14241 798 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms