RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 UTP14AQ9BVJ6 771 aaKnown RBP23.68■■□□□ 1.38
CLDN11-206ENST00000486429 ZC3H4Q9UPT8 1303 aaKnown RBP23.67■■□□□ 1.38
CLDN11-206ENST00000486429 C1QTNF8P60827 252 aa23.67■■□□□ 1.38
CLDN11-206ENST00000486429 TCIRG1Q13488 830 aa23.67■■□□□ 1.38
CLDN11-206ENST00000486429 CHMP4AQ9BY43 222 aa23.67■■□□□ 1.38
CLDN11-206ENST00000486429 NLRP10Q86W26 655 aa23.66■■□□□ 1.38
CLDN11-206ENST00000486429 RPGRQ92834 1020 aaKnown RBP23.66■■□□□ 1.38
CLDN11-206ENST00000486429 TAOK3Q9H2K8 898 aa23.66■■□□□ 1.38
CLDN11-206ENST00000486429 LTBP3Q9NS15 1303 aa23.65■■□□□ 1.38
CLDN11-206ENST00000486429 CCDC93Q567U6 631 aa23.65■■□□□ 1.38
CLDN11-206ENST00000486429 ANKRD13DQ6ZTN6 518 aa23.65■■□□□ 1.38
CLDN11-206ENST00000486429 SALL2Q9Y467 1007 aaPredicted RBP23.65■■□□□ 1.38
CLDN11-206ENST00000486429 ALDH1B1P30837 517 aa23.64■■□□□ 1.37
CLDN11-206ENST00000486429 PRELPP51888 382 aa23.64■■□□□ 1.37
CLDN11-206ENST00000486429 GOLGA2Q08379 1002 aa23.64■■□□□ 1.37
CLDN11-206ENST00000486429 CCDC30Q5VVM6 783 aa23.64■■□□□ 1.37
CLDN11-206ENST00000486429 TSPYL6Q8N831 410 aa23.63■■□□□ 1.37
CLDN11-206ENST00000486429 KDM2BQ8NHM5 1336 aa23.62■■□□□ 1.37
CLDN11-206ENST00000486429 CCDC88AQ3V6T2 1871 aa23.62■■□□□ 1.37
CLDN11-206ENST00000486429 WDR63Q8IWG1 891 aa23.62■■□□□ 1.37
CLDN11-206ENST00000486429 C7orf43Q8WVR3 580 aa23.62■■□□□ 1.37
CLDN11-206ENST00000486429 SH3TC1Q8TE82 1336 aa23.61■■□□□ 1.37
CLDN11-206ENST00000486429 FANCIQ9NVI1 1328 aa23.61■■□□□ 1.37
CLDN11-206ENST00000486429 KIF3CO14782 793 aa23.61■■□□□ 1.37
CLDN11-206ENST00000486429 HOXA10P31260 410 aaPredicted RBP23.61■■□□□ 1.37
CLDN11-206ENST00000486429 NLRP3Q96P20 1036 aa23.61■■□□□ 1.37
CLDN11-206ENST00000486429 PHAXQ9H814 394 aaKnown RBP23.61■■□□□ 1.37
CLDN11-206ENST00000486429 TRMT112Q9UI30 125 aaKnown RBP23.61■■□□□ 1.37
CLDN11-206ENST00000486429 LAMB2P55268 1798 aa23.6■■□□□ 1.37
CLDN11-206ENST00000486429 TWISTNBQ3B726 338 aaPredicted RBP23.6■■□□□ 1.37
CLDN11-206ENST00000486429 SLC10A5Q5PT55 438 aa23.6■■□□□ 1.37
CLDN11-206ENST00000486429 C3orf67Q6ZVT6 689 aa23.6■■□□□ 1.37
CLDN11-206ENST00000486429 ISCA1Q9BUE6 129 aa23.6■■□□□ 1.37
CLDN11-206ENST00000486429 NMRK2Q9NPI5 230 aa23.6■■□□□ 1.37
CLDN11-206ENST00000486429 DICER1Q9UPY3 1922 aaKnown RBP23.6■■□□□ 1.37
CLDN11-206ENST00000486429 RIC3Q7Z5B4 369 aa23.59■■□□□ 1.37
CLDN11-206ENST00000486429 RBM17Q96I25 401 aaKnown RBP23.59■■□□□ 1.37
CLDN11-206ENST00000486429 STK31Q9BXU1 1019 aa23.59■■□□□ 1.37
CLDN11-206ENST00000486429 CRAMP1Q96RY5 1269 aa23.58■■□□□ 1.37
CLDN11-206ENST00000486429 ATP5J2-PTCD1G3V325 749 aa23.57■■□□□ 1.36
CLDN11-206ENST00000486429 DDX58O95786 925 aaKnown RBP23.57■■□□□ 1.36
CLDN11-206ENST00000486429 FKBP4Q02790 459 aaKnown RBP eCLIP23.57■■□□□ 1.36
CLDN11-206ENST00000486429 OLFM4Q6UX06 510 aa23.57■■□□□ 1.36
CLDN11-206ENST00000486429 RTKN2Q8IZC4 609 aa23.57■■□□□ 1.36
CLDN11-206ENST00000486429 DDX60Q8IY21 1712 aaKnown RBP23.56■■□□□ 1.36
CLDN11-206ENST00000486429 HCLS1P14317 486 aaPredicted RBP23.56■■□□□ 1.36
CLDN11-206ENST00000486429 ZNF428Q96B54 188 aa23.56■■□□□ 1.36
CLDN11-206ENST00000486429 SNED1Q8TER0 1413 aa23.56■■□□□ 1.36
CLDN11-206ENST00000486429 PPEF1O14829 653 aaPredicted RBP23.55■■□□□ 1.36
CLDN11-206ENST00000486429 CC2D2BQ6DHV5 1058 aa23.55■■□□□ 1.36
CLDN11-206ENST00000486429 SYNE4Q8N205 404 aa23.55■■□□□ 1.36
CLDN11-206ENST00000486429 TCERG1O14776 1098 aaKnown RBP23.54■■□□□ 1.36
CLDN11-206ENST00000486429 TRIM28Q13263 835 aaKnown RBP23.54■■□□□ 1.36
CLDN11-206ENST00000486429 ABCC4O15439 1325 aa23.54■■□□□ 1.36
CLDN11-206ENST00000486429 GLTPD2A6NH11 291 aa23.53■■□□□ 1.36
CLDN11-206ENST00000486429 FAM89AQ96GI7 184 aa23.53■■□□□ 1.36
CLDN11-206ENST00000486429 MYD88Q99836 296 aa23.53■■□□□ 1.36
CLDN11-206ENST00000486429 MYH16Q9H6N6 1097 aa23.53■■□□□ 1.36
CLDN11-206ENST00000486429 ZNF277Q9NRM2 450 aaPredicted RBP23.52■■□□□ 1.36
CLDN11-206ENST00000486429 EXOSC9Q06265 439 aaKnown RBP23.51■■□□□ 1.35
CLDN11-206ENST00000486429 C16orf71Q8IYS4 520 aaPredicted RBP23.51■■□□□ 1.35
CLDN11-206ENST00000486429 TOMM70O94826 608 aa23.5■■□□□ 1.35
CLDN11-206ENST00000486429 GRIPAP1Q4V328 841 aa23.5■■□□□ 1.35
CLDN11-206ENST00000486429 RTL5Q5HYW3 569 aaPredicted RBP23.5■■□□□ 1.35
CLDN11-206ENST00000486429 DDX46Q7L014 1031 aaKnown RBP23.5■■□□□ 1.35
CLDN11-206ENST00000486429 PSMD1Q99460 953 aa23.5■■□□□ 1.35
CLDN11-206ENST00000486429 METTL22Q9BUU2 404 aaPredicted RBP23.5■■□□□ 1.35
CLDN11-206ENST00000486429 TMX4Q9H1E5 349 aaPredicted RBP23.5■■□□□ 1.35
CLDN11-206ENST00000486429 RRAGCQ9HB90 399 aa23.5■■□□□ 1.35
CLDN11-206ENST00000486429 SPINK5Q9NQ38 1064 aaPredicted RBP23.5■■□□□ 1.35
CLDN11-206ENST00000486429 MAP3K2Q9Y2U5 619 aa23.5■■□□□ 1.35
CLDN11-206ENST00000486429 SLC4A2P04920 1241 aa23.49■■□□□ 1.35
CLDN11-206ENST00000486429 DPY19L2Q6NUT2 758 aa23.49■■□□□ 1.35
CLDN11-206ENST00000486429 KSR2Q6VAB6 950 aa23.49■■□□□ 1.35
CLDN11-206ENST00000486429 CCDC191Q8NCU4 936 aa23.49■■□□□ 1.35
CLDN11-206ENST00000486429 WDR90Q96KV7 1748 aa23.49■■□□□ 1.35
CLDN11-206ENST00000486429 PI4KAP2A4QPH2 592 aa23.48■■□□□ 1.35
CLDN11-206ENST00000486429 IRS4O14654 1257 aaPredicted RBP23.48■■□□□ 1.35
CLDN11-206ENST00000486429 IARSP41252 1262 aaKnown RBP23.48■■□□□ 1.35
CLDN11-206ENST00000486429 GRAPQ13588 217 aa23.48■■□□□ 1.35
CLDN11-206ENST00000486429 PI4KAP1Q8N8J0 262 aa23.48■■□□□ 1.35
CLDN11-206ENST00000486429 GRAPLQ8TC17 118 aaPredicted RBP23.48■■□□□ 1.35
CLDN11-206ENST00000486429 CWC25Q9NXE8 425 aaPredicted RBP23.48■■□□□ 1.35
CLDN11-206ENST00000486429 ATP6V0A2Q9Y487 856 aa23.48■■□□□ 1.35
CLDN11-206ENST00000486429 ZNF521Q96K83 1311 aa23.48■■□□□ 1.35
CLDN11-206ENST00000486429 CCER2I3L3R5 266 aa23.47■■□□□ 1.35
CLDN11-206ENST00000486429 G2E3Q7L622 706 aa23.47■■□□□ 1.35
CLDN11-206ENST00000486429 SLC51AQ86UW1 340 aa23.47■■□□□ 1.35
CLDN11-206ENST00000486429 ZBTB38Q8NAP3 1195 aaPredicted RBP23.47■■□□□ 1.35
CLDN11-206ENST00000486429 VAMP4O75379 141 aa23.46■■□□□ 1.35
CLDN11-206ENST00000486429 BBOX1O75936 387 aa23.46■■□□□ 1.35
CLDN11-206ENST00000486429 HSP90B1P14625 803 aaKnown RBP23.46■■□□□ 1.35
CLDN11-206ENST00000486429 NEXNQ0ZGT2 675 aa23.46■■□□□ 1.35
CLDN11-206ENST00000486429 FLIIQ13045 1269 aa23.46■■□□□ 1.35
CLDN11-206ENST00000486429 CACNA1FO60840 1977 aa23.45■■□□□ 1.35
CLDN11-206ENST00000486429 LRRC37AA6NMS7 1700 aa23.45■■□□□ 1.34
CLDN11-206ENST00000486429 VEGFAP15692 232 aaPredicted RBP23.45■■□□□ 1.34
CLDN11-206ENST00000486429 SF3B3Q15393 1217 aaKnown RBP23.45■■□□□ 1.34
CLDN11-206ENST00000486429 RBM46Q8TBY0 533 aaKnown RBP23.45■■□□□ 1.34
CLDN11-206ENST00000486429 PCCAP05165 728 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms