RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 SLX4Q8IY92 1834 aa14.23□□□□□ -0.13
SNX21-211ENST00000486336 ATP5J2-PTCD1G3V325 749 aa14.23□□□□□ -0.13
SNX21-211ENST00000486336 NFKBIEO00221 500 aa14.23□□□□□ -0.13
SNX21-211ENST00000486336 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
SNX21-211ENST00000486336 SOGA3Q5TF21 947 aa14.23□□□□□ -0.13
SNX21-211ENST00000486336 RBM17Q96I25 401 aaKnown RBP14.23□□□□□ -0.13
SNX21-211ENST00000486336 NLRP3Q96P20 1036 aa14.23□□□□□ -0.13
SNX21-211ENST00000486336 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
SNX21-211ENST00000486336 IL16Q14005 1332 aa14.22□□□□□ -0.13
SNX21-211ENST00000486336 HCLS1P14317 486 aaPredicted RBP14.22□□□□□ -0.13
SNX21-211ENST00000486336 PRELPP51888 382 aa14.22□□□□□ -0.13
SNX21-211ENST00000486336 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
SNX21-211ENST00000486336 CCDC93Q567U6 631 aa14.22□□□□□ -0.13
SNX21-211ENST00000486336 OLFM4Q6UX06 510 aa14.22□□□□□ -0.13
SNX21-211ENST00000486336 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
SNX21-211ENST00000486336 SYNE4Q8N205 404 aa14.22□□□□□ -0.13
SNX21-211ENST00000486336 TAOK3Q9H2K8 898 aa14.22□□□□□ -0.13
SNX21-211ENST00000486336 CACNA1SQ13698 1873 aa14.22□□□□□ -0.13
SNX21-211ENST00000486336 TWISTNBQ3B726 338 aaPredicted RBP14.21□□□□□ -0.13
SNX21-211ENST00000486336 C3orf67Q6ZVT6 689 aa14.21□□□□□ -0.13
SNX21-211ENST00000486336 STK31Q9BXU1 1019 aa14.21□□□□□ -0.13
SNX21-211ENST00000486336 NMRK2Q9NPI5 230 aa14.21□□□□□ -0.13
SNX21-211ENST00000486336 SBF1O95248 1867 aa14.21□□□□□ -0.14
SNX21-211ENST00000486336 KDM2BQ8NHM5 1336 aa14.2□□□□□ -0.14
SNX21-211ENST00000486336 CRY2Q49AN0 593 aa14.2□□□□□ -0.14
SNX21-211ENST00000486336 RTL5Q5HYW3 569 aaPredicted RBP14.2□□□□□ -0.14
SNX21-211ENST00000486336 SLC10A5Q5PT55 438 aa14.2□□□□□ -0.14
SNX21-211ENST00000486336 C7orf43Q8WVR3 580 aa14.2□□□□□ -0.14
SNX21-211ENST00000486336 MYD88Q99836 296 aa14.2□□□□□ -0.14
SNX21-211ENST00000486336 RRAGCQ9HB90 399 aa14.2□□□□□ -0.14
SNX21-211ENST00000486336 SH3TC1Q8TE82 1336 aa14.19□□□□□ -0.14
SNX21-211ENST00000486336 KIF3CO14782 793 aa14.19□□□□□ -0.14
SNX21-211ENST00000486336 DDX58O95786 925 aaKnown RBP14.19□□□□□ -0.14
SNX21-211ENST00000486336 RTKN2Q8IZC4 609 aa14.19□□□□□ -0.14
SNX21-211ENST00000486336 FAM89AQ96GI7 184 aa14.19□□□□□ -0.14
SNX21-211ENST00000486336 ISCA1Q9BUE6 129 aa14.19□□□□□ -0.14
SNX21-211ENST00000486336 TNRC6CQ9HCJ0 1690 aaKnown RBP14.19□□□□□ -0.14
SNX21-211ENST00000486336 CCDC88AQ3V6T2 1871 aa14.18□□□□□ -0.14
SNX21-211ENST00000486336 FANCIQ9NVI1 1328 aa14.18□□□□□ -0.14
SNX21-211ENST00000486336 HOXA10P31260 410 aaPredicted RBP14.18□□□□□ -0.14
SNX21-211ENST00000486336 EXOSC9Q06265 439 aaKnown RBP14.18□□□□□ -0.14
SNX21-211ENST00000486336 C16orf71Q8IYS4 520 aaPredicted RBP14.18□□□□□ -0.14
SNX21-211ENST00000486336 CRAMP1Q96RY5 1269 aa14.18□□□□□ -0.14
SNX21-211ENST00000486336 TMX4Q9H1E5 349 aaPredicted RBP14.18□□□□□ -0.14
SNX21-211ENST00000486336 ZNF277Q9NRM2 450 aaPredicted RBP14.18□□□□□ -0.14
SNX21-211ENST00000486336 RNF123Q5XPI4 1314 aa14.17□□□□□ -0.14
SNX21-211ENST00000486336 PPEF1O14829 653 aaPredicted RBP14.17□□□□□ -0.14
SNX21-211ENST00000486336 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
SNX21-211ENST00000486336 FKBP4Q02790 459 aaKnown RBP eCLIP14.17□□□□□ -0.14
SNX21-211ENST00000486336 DPY19L2Q6NUT2 758 aa14.17□□□□□ -0.14
SNX21-211ENST00000486336 MYH16Q9H6N6 1097 aa14.17□□□□□ -0.14
SNX21-211ENST00000486336 MAP3K2Q9Y2U5 619 aa14.17□□□□□ -0.14
SNX21-211ENST00000486336 ANKRD36CQ5JPF3 1778 aa14.17□□□□□ -0.14
SNX21-211ENST00000486336 LTBP3Q9NS15 1303 aa14.16□□□□□ -0.14
SNX21-211ENST00000486336 GLTPD2A6NH11 291 aa14.16□□□□□ -0.14
SNX21-211ENST00000486336 DDX46Q7L014 1031 aaKnown RBP14.16□□□□□ -0.14
SNX21-211ENST00000486336 JARID2Q92833 1246 aaPredicted RBP14.16□□□□□ -0.14
SNX21-211ENST00000486336 METTL22Q9BUU2 404 aaPredicted RBP14.16□□□□□ -0.14
SNX21-211ENST00000486336 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
SNX21-211ENST00000486336 FER1L6Q2WGJ9 1857 aa14.16□□□□□ -0.14
SNX21-211ENST00000486336 ZC3H4Q9UPT8 1303 aaKnown RBP14.15□□□□□ -0.14
SNX21-211ENST00000486336 RIC1Q4ADV7 1423 aa14.15□□□□□ -0.14
SNX21-211ENST00000486336 ARFGEF2Q9Y6D5 1785 aa14.15□□□□□ -0.14
SNX21-211ENST00000486336 PI4KAP2A4QPH2 592 aa14.15□□□□□ -0.14
SNX21-211ENST00000486336 IRS4O14654 1257 aaPredicted RBP14.15□□□□□ -0.14
SNX21-211ENST00000486336 VAMP4O75379 141 aa14.15□□□□□ -0.14
SNX21-211ENST00000486336 TRIM28Q13263 835 aaKnown RBP14.15□□□□□ -0.14
SNX21-211ENST00000486336 CC2D2BQ6DHV5 1058 aa14.15□□□□□ -0.14
SNX21-211ENST00000486336 KSR2Q6VAB6 950 aa14.15□□□□□ -0.14
SNX21-211ENST00000486336 G2E3Q7L622 706 aa14.15□□□□□ -0.14
SNX21-211ENST00000486336 PI4KAP1Q8N8J0 262 aa14.15□□□□□ -0.14
SNX21-211ENST00000486336 ABCC4O15439 1325 aa14.15□□□□□ -0.15
SNX21-211ENST00000486336 SLC51AQ86UW1 340 aa14.14□□□□□ -0.15
SNX21-211ENST00000486336 CWC25Q9NXE8 425 aaPredicted RBP14.14□□□□□ -0.15
SNX21-211ENST00000486336 BBOX1O75936 387 aa14.13□□□□□ -0.15
SNX21-211ENST00000486336 TOMM70O94826 608 aa14.13□□□□□ -0.15
SNX21-211ENST00000486336 IARSP41252 1262 aaKnown RBP14.13□□□□□ -0.15
SNX21-211ENST00000486336 NEXNQ0ZGT2 675 aa14.13□□□□□ -0.15
SNX21-211ENST00000486336 ZBTB38Q8NAP3 1195 aaPredicted RBP14.13□□□□□ -0.15
SNX21-211ENST00000486336 CCDC191Q8NCU4 936 aa14.13□□□□□ -0.15
SNX21-211ENST00000486336 CCER2I3L3R5 266 aa14.12□□□□□ -0.15
SNX21-211ENST00000486336 DDNO94850 711 aaPredicted RBP14.12□□□□□ -0.15
SNX21-211ENST00000486336 VEGFAP15692 232 aaPredicted RBP14.12□□□□□ -0.15
SNX21-211ENST00000486336 FLIIQ13045 1269 aa14.12□□□□□ -0.15
SNX21-211ENST00000486336 FKBP5Q13451 457 aaPredicted RBP14.12□□□□□ -0.15
SNX21-211ENST00000486336 GRAPQ13588 217 aa14.12□□□□□ -0.15
SNX21-211ENST00000486336 GRIPAP1Q4V328 841 aa14.12□□□□□ -0.15
SNX21-211ENST00000486336 GRAPLQ8TC17 118 aaPredicted RBP14.12□□□□□ -0.15
SNX21-211ENST00000486336 PSMD1Q99460 953 aa14.12□□□□□ -0.15
SNX21-211ENST00000486336 ATP6V0A2Q9Y487 856 aa14.12□□□□□ -0.15
SNX21-211ENST00000486336 PCCAP05165 728 aaPredicted RBP14.11□□□□□ -0.15
SNX21-211ENST00000486336 HSP90B1P14625 803 aaKnown RBP14.11□□□□□ -0.15
SNX21-211ENST00000486336 TIAM2Q8IVF5 1701 aa14.11□□□□□ -0.15
SNX21-211ENST00000486336 SP8Q8IXZ3 490 aa14.11□□□□□ -0.15
SNX21-211ENST00000486336 LARGE2Q8N3Y3 721 aa14.11□□□□□ -0.15
SNX21-211ENST00000486336 JDP2Q8WYK2 163 aa14.11□□□□□ -0.15
SNX21-211ENST00000486336 DICER1Q9UPY3 1922 aaKnown RBP14.1□□□□□ -0.15
SNX21-211ENST00000486336 SF3B3Q15393 1217 aaKnown RBP14.1□□□□□ -0.15
SNX21-211ENST00000486336 CWF19L2Q2TBE0 894 aaKnown RBP14.1□□□□□ -0.15
SNX21-211ENST00000486336 DPP8Q6V1X1 898 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms