RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
VTI1BP1-201ENST00000486325 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
VTI1BP1-201ENST00000486325 NIP7Q9Y221 180 aaKnown RBP eCLIP16.53■□□□□ 0.24
VTI1BP1-201ENST00000486325 RGPD3A6NKT7 1758 aaPredicted RBP16.52■□□□□ 0.24
VTI1BP1-201ENST00000486325 RGPD4Q7Z3J3 1758 aa16.52■□□□□ 0.24
VTI1BP1-201ENST00000486325 CASP7P55210 303 aa16.52■□□□□ 0.24
VTI1BP1-201ENST00000486325 USPL1Q5W0Q7 1092 aa16.52■□□□□ 0.24
VTI1BP1-201ENST00000486325 SMC5Q8IY18 1101 aa16.52■□□□□ 0.24
VTI1BP1-201ENST00000486325 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
VTI1BP1-201ENST00000486325 SUCLG2Q96I99 432 aa16.52■□□□□ 0.24
VTI1BP1-201ENST00000486325 UTP14AQ9BVJ6 771 aaKnown RBP16.52■□□□□ 0.24
VTI1BP1-201ENST00000486325 DCTPP1Q9H773 170 aa16.52■□□□□ 0.24
VTI1BP1-201ENST00000486325 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
VTI1BP1-201ENST00000486325 NUP98P52948 1817 aa16.52■□□□□ 0.23
VTI1BP1-201ENST00000486325 CDHR2Q9BYE9 1310 aa16.51■□□□□ 0.23
VTI1BP1-201ENST00000486325 PHF14O94880 888 aa16.51■□□□□ 0.23
VTI1BP1-201ENST00000486325 EZH2Q15910 746 aaKnown RBP16.51■□□□□ 0.23
VTI1BP1-201ENST00000486325 SETDB2Q96T68 719 aa16.51■□□□□ 0.23
VTI1BP1-201ENST00000486325 PLA2G12BQ9BX93 195 aa16.51■□□□□ 0.23
VTI1BP1-201ENST00000486325 TNS1Q9HBL0 1735 aaKnown RBP16.5■□□□□ 0.23
VTI1BP1-201ENST00000486325 USP42Q9H9J4 1324 aaKnown RBP16.5■□□□□ 0.23
VTI1BP1-201ENST00000486325 SRGAP3O43295 1099 aa16.5■□□□□ 0.23
VTI1BP1-201ENST00000486325 POLA2Q14181 598 aa16.5■□□□□ 0.23
VTI1BP1-201ENST00000486325 HSP90AB4PQ58FF6 505 aa16.5■□□□□ 0.23
VTI1BP1-201ENST00000486325 STK32BQ9NY57 414 aa16.5■□□□□ 0.23
VTI1BP1-201ENST00000486325 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
VTI1BP1-201ENST00000486325 AFDNP55196 1824 aaKnown RBP16.49■□□□□ 0.23
VTI1BP1-201ENST00000486325 RABL6Q3YEC7 729 aaPredicted RBP16.49■□□□□ 0.23
VTI1BP1-201ENST00000486325 SUSD4Q5VX71 490 aa16.49■□□□□ 0.23
VTI1BP1-201ENST00000486325 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
VTI1BP1-201ENST00000486325 KAZALD1Q96I82 304 aa16.49■□□□□ 0.23
VTI1BP1-201ENST00000486325 NYXQ9GZU5 481 aa16.49■□□□□ 0.23
VTI1BP1-201ENST00000486325 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
VTI1BP1-201ENST00000486325 BCL2L12Q9HB09 334 aa16.49■□□□□ 0.23
VTI1BP1-201ENST00000486325 SRP68Q9UHB9 627 aaKnown RBP16.49■□□□□ 0.23
VTI1BP1-201ENST00000486325 SH3TC1Q8TE82 1336 aa16.48■□□□□ 0.23
VTI1BP1-201ENST00000486325 PNMA6EA0A0J9YXQ4 647 aa16.48■□□□□ 0.23
VTI1BP1-201ENST00000486325 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
VTI1BP1-201ENST00000486325 UBN2Q6ZU65 1347 aa16.47■□□□□ 0.23
VTI1BP1-201ENST00000486325 IRS4O14654 1257 aaPredicted RBP16.47■□□□□ 0.23
VTI1BP1-201ENST00000486325 RAB11FIP3O75154 756 aa16.47■□□□□ 0.23
VTI1BP1-201ENST00000486325 FOXO4P98177 505 aa16.47■□□□□ 0.23
VTI1BP1-201ENST00000486325 SLC15A2Q16348 729 aa16.47■□□□□ 0.23
VTI1BP1-201ENST00000486325 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
VTI1BP1-201ENST00000486325 TBC1D9BQ66K14 1250 aa16.47■□□□□ 0.23
VTI1BP1-201ENST00000486325 TPTE2Q6XPS3 522 aa16.47■□□□□ 0.23
VTI1BP1-201ENST00000486325 SMIM5Q71RC9 77 aa16.47■□□□□ 0.23
VTI1BP1-201ENST00000486325 AMIGO3Q86WK7 504 aa16.47■□□□□ 0.23
VTI1BP1-201ENST00000486325 PDE8AO60658 829 aa16.46■□□□□ 0.23
VTI1BP1-201ENST00000486325 GTF2E1P29083 439 aaPredicted RBP16.46■□□□□ 0.23
VTI1BP1-201ENST00000486325 RTL5Q5HYW3 569 aaPredicted RBP16.46■□□□□ 0.23
VTI1BP1-201ENST00000486325 EPHA10Q5JZY3 1008 aa16.46■□□□□ 0.23
VTI1BP1-201ENST00000486325 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
VTI1BP1-201ENST00000486325 NLGN1Q8N2Q7 840 aa16.46■□□□□ 0.23
VTI1BP1-201ENST00000486325 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.23
VTI1BP1-201ENST00000486325 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.22
VTI1BP1-201ENST00000486325 UBR3Q6ZT12 1888 aa16.46■□□□□ 0.22
VTI1BP1-201ENST00000486325 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 NTSR2O95665 410 aa16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 CSF1RP07333 972 aa16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 GYS1P13807 737 aa16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 NUCB1Q02818 461 aa16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 SLC10A5Q5PT55 438 aa16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 ANKRD45Q5TZF3 282 aa16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 BICDL1Q6ZP65 573 aa16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 DEFB132Q7Z7B7 95 aa16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 COL23A1Q86Y22 540 aaPredicted RBP16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 PDZRN3Q9UPQ7 1066 aa16.45■□□□□ 0.22
VTI1BP1-201ENST00000486325 BCORQ6W2J9 1755 aa16.44■□□□□ 0.22
VTI1BP1-201ENST00000486325 EP400Q96L91 3159 aa16.44■□□□□ 0.22
VTI1BP1-201ENST00000486325 MSH5O43196 834 aa16.44■□□□□ 0.22
VTI1BP1-201ENST00000486325 G3BP1Q13283 466 aaKnown RBP eCLIP16.44■□□□□ 0.22
VTI1BP1-201ENST00000486325 NBPF5PQ86XG9 351 aaPredicted RBP16.44■□□□□ 0.22
VTI1BP1-201ENST00000486325 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
VTI1BP1-201ENST00000486325 TM4SF1P30408 202 aa16.43■□□□□ 0.22
VTI1BP1-201ENST00000486325 CCDC57Q2TAC2 916 aa16.43■□□□□ 0.22
VTI1BP1-201ENST00000486325 CHD1LQ86WJ1 897 aa16.43■□□□□ 0.22
VTI1BP1-201ENST00000486325 ERC1Q8IUD2 1116 aa16.43■□□□□ 0.22
VTI1BP1-201ENST00000486325 COPRSQ9NQ92 184 aa16.43■□□□□ 0.22
VTI1BP1-201ENST00000486325 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
VTI1BP1-201ENST00000486325 CTSWP56202 376 aa16.42■□□□□ 0.22
VTI1BP1-201ENST00000486325 NFIXQ14938 502 aa16.42■□□□□ 0.22
VTI1BP1-201ENST00000486325 TTLL11Q8NHH1 800 aa16.42■□□□□ 0.22
VTI1BP1-201ENST00000486325 FBXO3Q9UK99 471 aa16.42■□□□□ 0.22
VTI1BP1-201ENST00000486325 CHMP3Q9Y3E7 222 aa16.42■□□□□ 0.22
VTI1BP1-201ENST00000486325 SCN7AQ01118 1682 aa16.42■□□□□ 0.22
VTI1BP1-201ENST00000486325 NPHP1O15259 732 aa16.41■□□□□ 0.22
VTI1BP1-201ENST00000486325 IFIT5Q13325 482 aaKnown RBP16.41■□□□□ 0.22
VTI1BP1-201ENST00000486325 OS9Q13438 667 aaPredicted RBP16.41■□□□□ 0.22
VTI1BP1-201ENST00000486325 SYNE4Q8N205 404 aa16.41■□□□□ 0.22
VTI1BP1-201ENST00000486325 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
VTI1BP1-201ENST00000486325 LRRCC1Q9C099 1032 aa16.41■□□□□ 0.22
VTI1BP1-201ENST00000486325 EXOC6BQ9Y2D4 811 aa16.41■□□□□ 0.22
VTI1BP1-201ENST00000486325 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
VTI1BP1-201ENST00000486325 RFX5P48382 616 aaPredicted RBP16.4■□□□□ 0.22
VTI1BP1-201ENST00000486325 CCDC152Q4G0S7 254 aa16.4■□□□□ 0.22
VTI1BP1-201ENST00000486325 UPF1Q92900 1129 aaKnown RBP eCLIP16.4■□□□□ 0.22
VTI1BP1-201ENST00000486325 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
VTI1BP1-201ENST00000486325 ANKRD18BA2A2Z9 1011 aa16.39■□□□□ 0.21
VTI1BP1-201ENST00000486325 SERPINB2P05120 415 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms