RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 NBPF11Q86T75 865 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 MIPOL1Q8TD10 442 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 A0A1B0GUL7 405 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 FKBP4Q02790 459 aaKnown RBP eCLIP10.08□□□□□ -0.8
GABRE-209ENST00000486255 CCDC96Q2M329 555 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 CNNM3Q8NE01 707 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 ATRIPQ8WXE1 791 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 STMN4Q9H169 189 aaPredicted RBP10.08□□□□□ -0.8
GABRE-209ENST00000486255 ARFGAP3Q9NP61 516 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 DDX19AQ9NUU7 478 aaKnown RBP10.08□□□□□ -0.8
GABRE-209ENST00000486255 ZFYVE16Q7Z3T8 1539 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 SLC4A2P04920 1241 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 GNG11P61952 73 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 FERMT3Q86UX7 667 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 NGLY1Q96IV0 654 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 GGNBP2Q9H3C7 697 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
GABRE-209ENST00000486255 MLH3Q9UHC1 1453 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 ZFYP08048 801 aaPredicted RBP10.07□□□□□ -0.8
GABRE-209ENST00000486255 CAPN2P17655 700 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 THEMISQ8N1K5 641 aaPredicted RBP10.07□□□□□ -0.8
GABRE-209ENST00000486255 UBA5Q9GZZ9 404 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 UNC13BO14795 1591 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 PPP2R1AP30153 589 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 CEP120Q8N960 986 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 RASSF4Q9H2L5 321 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 USP5P45974 858 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 MTIF2P46199 727 aaKnown RBP10.07□□□□□ -0.8
GABRE-209ENST00000486255 IFI16Q16666 785 aaKnown RBP10.07□□□□□ -0.8
GABRE-209ENST00000486255 NUTM2GQ5VZR2 741 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 TSR2Q969E8 191 aaKnown RBP10.07□□□□□ -0.8
GABRE-209ENST00000486255 SELENOSQ9BQE4 189 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 VPS18Q9P253 973 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 NOP2P46087 812 aaKnown RBP10.07□□□□□ -0.8
GABRE-209ENST00000486255 TPD52P55327 224 aaPredicted RBP10.07□□□□□ -0.8
GABRE-209ENST00000486255 C10orf67Q8IYJ2 551 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 ANKLE2Q86XL3 938 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 SMC6Q96SB8 1091 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 SWAP70Q9UH65 585 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 IQGAP3Q86VI3 1631 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 ABCA9Q8IUA7 1624 aa10.07□□□□□ -0.8
GABRE-209ENST00000486255 CTAGE15A4D2H0 777 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 CTAGE8P0CG41 777 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 CTAGE6Q86UF2 777 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 CTAGE4Q8IX94 777 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
GABRE-209ENST00000486255 RASAL2Q9UJF2 1139 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 ADGRF5Q8IZF2 1346 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 HECW2Q9P2P5 1572 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 TNIP1Q15025 636 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 ZSCAN23Q3MJ62 389 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 TXNDC2Q86VQ3 553 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 RPUSD2Q8IZ73 545 aaKnown RBP10.06□□□□□ -0.8
GABRE-209ENST00000486255 FSIP1Q8NA03 581 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 CCDC114Q96M63 670 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 MTHFSP49914 203 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 SH2B1Q9NRF2 756 aaPredicted RBP10.06□□□□□ -0.8
GABRE-209ENST00000486255 TRPM2O94759 1503 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 PRAM1Q96QH2 718 aa10.06□□□□□ -0.8
GABRE-209ENST00000486255 EBAG9O00559 213 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 ARID4AP29374 1257 aaPredicted RBP10.05□□□□□ -0.8
GABRE-209ENST00000486255 KIAA0753Q2KHM9 967 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 RAB3IL1Q8TBN0 382 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 CABP2Q9NPB3 220 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 SEC63Q9UGP8 760 aaKnown RBP10.05□□□□□ -0.8
GABRE-209ENST00000486255 C11orf95C9JLR9 678 aaPredicted RBP10.05□□□□□ -0.8
GABRE-209ENST00000486255 MCM6Q14566 821 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 NOLC1Q14978 699 aaKnown RBP eCLIP10.05□□□□□ -0.82e-7■■■□□ 15.8
GABRE-209ENST00000486255 ATF7IPQ6VMQ6 1270 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 PSMD1Q99460 953 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 CDC42BPBQ9Y5S2 1711 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 TOM1O60784 492 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 GOLGA1Q92805 767 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 DRC1Q96MC2 740 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 PRKAR2BP31323 418 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 SMAP1Q8IYB5 467 aaPredicted RBP10.05□□□□□ -0.8
GABRE-209ENST00000486255 C8orf76Q96K31 380 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 TTC14Q96N46 770 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 CLCN1P35523 988 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 PPP4R3AQ6IN85 833 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 KRBA2Q6ZNG9 492 aa10.05□□□□□ -0.8
GABRE-209ENST00000486255 ZNF830Q96NB3 372 aaPredicted RBP10.05□□□□□ -0.8
GABRE-209ENST00000486255 IQCGQ9H095 443 aaKnown RBP10.05□□□□□ -0.8
GABRE-209ENST00000486255 MAGI2Q86UL8 1455 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 PABPN1LA6NDY0 278 aaKnown RBP10.04□□□□□ -0.8
GABRE-209ENST00000486255 PRPF40BQ6NWY9 871 aaKnown RBP10.04□□□□□ -0.8
GABRE-209ENST00000486255 GUCY1B3Q02153 619 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 SSRP1Q08945 709 aaKnown RBP10.04□□□□□ -0.8
GABRE-209ENST00000486255 WDR63Q8IWG1 891 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 PSMC4P43686 418 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 PPM1FP49593 454 aaPredicted RBP10.04□□□□□ -0.8
GABRE-209ENST00000486255 NUTM1Q86Y26 1132 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 CWC25Q9NXE8 425 aaPredicted RBP10.04□□□□□ -0.8
GABRE-209ENST00000486255 KIF20AO95235 890 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 LRSAM1Q6UWE0 723 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 SELENOOQ9BVL4 669 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 OGFRQ9NZT2 677 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 FAM184BQ9ULE4 1060 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 GPRASP1Q5JY77 1395 aa10.04□□□□□ -0.8
GABRE-209ENST00000486255 LACTBP83111 547 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms