RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 FER1L6Q2WGJ9 1857 aa28.52■■■□□ 2.16
HLA-F-228ENST00000486194 HSPA6P17066 643 aa28.51■■■□□ 2.15
HLA-F-228ENST00000486194 DPY19L2Q6NUT2 758 aa28.51■■■□□ 2.15
HLA-F-228ENST00000486194 RTKN2Q8IZC4 609 aa28.51■■■□□ 2.15
HLA-F-228ENST00000486194 CHMP4AQ9BY43 222 aa28.51■■■□□ 2.15
HLA-F-228ENST00000486194 MRS2Q9HD23 443 aa28.51■■■□□ 2.15
HLA-F-228ENST00000486194 HYPKQ9NX55 129 aa28.5■■■□□ 2.15
HLA-F-228ENST00000486194 TNRC6CQ9HCJ0 1690 aaKnown RBP28.49■■■□□ 2.15
HLA-F-228ENST00000486194 TCIRG1Q13488 830 aa28.49■■■□□ 2.15
HLA-F-228ENST00000486194 RBM46Q8TBY0 533 aaKnown RBP28.49■■■□□ 2.15
HLA-F-228ENST00000486194 RRAGCQ9HB90 399 aa28.49■■■□□ 2.15
HLA-F-228ENST00000486194 CACNA1SQ13698 1873 aa28.49■■■□□ 2.15
HLA-F-228ENST00000486194 HOXA10P31260 410 aaPredicted RBP28.48■■■□□ 2.15
HLA-F-228ENST00000486194 PLBD2Q8NHP8 589 aa28.48■■■□□ 2.15
HLA-F-228ENST00000486194 RBM17Q96I25 401 aaKnown RBP28.48■■■□□ 2.15
HLA-F-228ENST00000486194 NLRP3Q96P20 1036 aa28.48■■■□□ 2.15
HLA-F-228ENST00000486194 TIAM2Q8IVF5 1701 aa28.48■■■□□ 2.15
HLA-F-228ENST00000486194 FKBP4Q02790 459 aaKnown RBP eCLIP28.47■■■□□ 2.15
HLA-F-228ENST00000486194 CCDC27Q2M243 656 aa28.47■■■□□ 2.15
HLA-F-228ENST00000486194 CC2D2BQ6DHV5 1058 aa28.47■■■□□ 2.15
HLA-F-228ENST00000486194 SLC10A5Q5PT55 438 aa28.46■■■□□ 2.15
HLA-F-228ENST00000486194 ANKRD13DQ6ZTN6 518 aa28.46■■■□□ 2.15
HLA-F-228ENST00000486194 NLRP10Q86W26 655 aa28.46■■■□□ 2.15
HLA-F-228ENST00000486194 VEGFAP15692 232 aaPredicted RBP28.45■■■□□ 2.14
HLA-F-228ENST00000486194 GRIPAP1Q4V328 841 aa28.45■■■□□ 2.14
HLA-F-228ENST00000486194 NCBP3Q53F19 620 aaKnown RBP28.45■■■□□ 2.14
HLA-F-228ENST00000486194 CRAMP1Q96RY5 1269 aa28.45■■■□□ 2.14
HLA-F-228ENST00000486194 CCDC88AQ3V6T2 1871 aa28.44■■■□□ 2.14
HLA-F-228ENST00000486194 FSTL1Q12841 308 aa28.43■■■□□ 2.14
HLA-F-228ENST00000486194 TRMT112Q9UI30 125 aaKnown RBP28.43■■■□□ 2.14
HLA-F-228ENST00000486194 ANKRD36CQ5JPF3 1778 aa28.42■■■□□ 2.14
HLA-F-228ENST00000486194 DICER1Q9UPY3 1922 aaKnown RBP28.41■■■□□ 2.14
HLA-F-228ENST00000486194 ELL2O00472 640 aaPredicted RBP28.41■■■□□ 2.14
HLA-F-228ENST00000486194 SH3TC1Q8TE82 1336 aa28.41■■■□□ 2.14
HLA-F-228ENST00000486194 WWC1Q8IX03 1113 aa28.4■■■□□ 2.14
HLA-F-228ENST00000486194 PSMD1Q99460 953 aa28.4■■■□□ 2.14
HLA-F-228ENST00000486194 TMX4Q9H1E5 349 aaPredicted RBP28.4■■■□□ 2.14
HLA-F-228ENST00000486194 GOLGA2Q08379 1002 aa28.39■■■□□ 2.14
HLA-F-228ENST00000486194 CCDC30Q5VVM6 783 aa28.39■■■□□ 2.14
HLA-F-228ENST00000486194 OLFM4Q6UX06 510 aa28.39■■■□□ 2.14
HLA-F-228ENST00000486194 PPEF1O14829 653 aaPredicted RBP28.38■■■□□ 2.13
HLA-F-228ENST00000486194 APLP1P51693 650 aa28.38■■■□□ 2.13
HLA-F-228ENST00000486194 SYNE4Q8N205 404 aa28.38■■■□□ 2.13
HLA-F-228ENST00000486194 C8orf58Q8NAV2 365 aa28.38■■■□□ 2.13
HLA-F-228ENST00000486194 ZNF277Q9NRM2 450 aaPredicted RBP28.38■■■□□ 2.13
HLA-F-228ENST00000486194 IL16Q14005 1332 aa28.38■■■□□ 2.13
HLA-F-228ENST00000486194 C3orf67Q6ZVT6 689 aa28.37■■■□□ 2.13
HLA-F-228ENST00000486194 SMC1BQ8NDV3 1235 aa28.37■■■□□ 2.13
HLA-F-228ENST00000486194 ISCA1Q9BUE6 129 aa28.37■■■□□ 2.13
HLA-F-228ENST00000486194 IARSP41252 1262 aaKnown RBP28.36■■■□□ 2.13
HLA-F-228ENST00000486194 RIC3Q7Z5B4 369 aa28.36■■■□□ 2.13
HLA-F-228ENST00000486194 WDR90Q96KV7 1748 aa28.35■■■□□ 2.13
HLA-F-228ENST00000486194 HCLS1P14317 486 aaPredicted RBP28.35■■■□□ 2.13
HLA-F-228ENST00000486194 TRIM28Q13263 835 aaKnown RBP28.35■■■□□ 2.13
HLA-F-228ENST00000486194 DDX58O95786 925 aaKnown RBP28.34■■■□□ 2.13
HLA-F-228ENST00000486194 SNED1Q8TER0 1413 aa28.34■■■□□ 2.13
HLA-F-228ENST00000486194 BBOX1O75936 387 aa28.33■■■□□ 2.13
HLA-F-228ENST00000486194 DDX46Q7L014 1031 aaKnown RBP28.33■■■□□ 2.13
HLA-F-228ENST00000486194 JDP2Q8WYK2 163 aa28.33■■■□□ 2.13
HLA-F-228ENST00000486194 TSR2Q969E8 191 aaKnown RBP28.33■■■□□ 2.13
HLA-F-228ENST00000486194 PHAXQ9H814 394 aaKnown RBP28.33■■■□□ 2.13
HLA-F-228ENST00000486194 ATP5J2-PTCD1G3V325 749 aa28.32■■■□□ 2.12
HLA-F-228ENST00000486194 DDNO94850 711 aaPredicted RBP28.32■■■□□ 2.12
HLA-F-228ENST00000486194 ATP6V0A2Q9Y487 856 aa28.32■■■□□ 2.12
HLA-F-228ENST00000486194 ABCC4O15439 1325 aa28.32■■■□□ 2.12
HLA-F-228ENST00000486194 IQCA1LA6NCM1 817 aa28.31■■■□□ 2.12
HLA-F-228ENST00000486194 STK31Q9BXU1 1019 aa28.31■■■□□ 2.12
HLA-F-228ENST00000486194 POTECB2RU33 542 aa28.3■■■□□ 2.12
HLA-F-228ENST00000486194 TCERG1O14776 1098 aaKnown RBP28.3■■■□□ 2.12
HLA-F-228ENST00000486194 HSP90B1P14625 803 aaKnown RBP28.3■■■□□ 2.12
HLA-F-228ENST00000486194 TSPYL6Q8N831 410 aa28.3■■■□□ 2.12
HLA-F-228ENST00000486194 WDR63Q8IWG1 891 aa28.29■■■□□ 2.12
HLA-F-228ENST00000486194 FAM89AQ96GI7 184 aa28.29■■■□□ 2.12
HLA-F-228ENST00000486194 L3MBTL3Q96JM7 780 aaPredicted RBP28.29■■■□□ 2.12
HLA-F-228ENST00000486194 FZD9O00144 591 aa28.28■■■□□ 2.12
HLA-F-228ENST00000486194 GRAPQ13588 217 aa28.28■■■□□ 2.12
HLA-F-228ENST00000486194 TWISTNBQ3B726 338 aaPredicted RBP28.28■■■□□ 2.12
HLA-F-228ENST00000486194 TMC4Q7Z404 712 aa28.28■■■□□ 2.12
HLA-F-228ENST00000486194 GRAPLQ8TC17 118 aaPredicted RBP28.28■■■□□ 2.12
HLA-F-228ENST00000486194 VPS33BQ9H267 617 aa28.28■■■□□ 2.12
HLA-F-228ENST00000486194 SP8Q8IXZ3 490 aa28.27■■■□□ 2.12
HLA-F-228ENST00000486194 SUPT20HQ8NEM7 779 aa28.27■■■□□ 2.12
HLA-F-228ENST00000486194 LARGE2Q8N3Y3 721 aa28.26■■■□□ 2.11
HLA-F-228ENST00000486194 ZBTB38Q8NAP3 1195 aaPredicted RBP28.26■■■□□ 2.11
HLA-F-228ENST00000486194 CCDC191Q8NCU4 936 aa28.26■■■□□ 2.11
HLA-F-228ENST00000486194 MYD88Q99836 296 aa28.26■■■□□ 2.11
HLA-F-228ENST00000486194 ZNF541Q9H0D2 1346 aa28.25■■■□□ 2.11
HLA-F-228ENST00000486194 EIF6P56537 245 aaKnown RBP28.25■■■□□ 2.11
HLA-F-228ENST00000486194 SF3B3Q15393 1217 aaKnown RBP28.25■■■□□ 2.11
HLA-F-228ENST00000486194 FAM9BQ8IZU0 186 aa28.25■■■□□ 2.11
HLA-F-228ENST00000486194 METTL22Q9BUU2 404 aaPredicted RBP28.25■■■□□ 2.11
HLA-F-228ENST00000486194 LAMB2P55268 1798 aa28.24■■■□□ 2.11
HLA-F-228ENST00000486194 IRS4O14654 1257 aaPredicted RBP28.24■■■□□ 2.11
HLA-F-228ENST00000486194 ZNF428Q96B54 188 aa28.24■■■□□ 2.11
HLA-F-228ENST00000486194 SALL2Q9Y467 1007 aaPredicted RBP28.24■■■□□ 2.11
HLA-F-228ENST00000486194 DPP8Q6V1X1 898 aaPredicted RBP28.23■■■□□ 2.11
HLA-F-228ENST00000486194 GPC2Q8N158 579 aa28.23■■■□□ 2.11
HLA-F-228ENST00000486194 FANCIQ9NVI1 1328 aa28.22■■■□□ 2.11
HLA-F-228ENST00000486194 RTL5Q5HYW3 569 aaPredicted RBP28.22■■■□□ 2.11
HLA-F-228ENST00000486194 KSR2Q6VAB6 950 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms