RNA–Protein interactions for RNA: ENST00000485976.5

NECAB3-212, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 1,016 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-212ENST00000485976 C21orf2O43822 256 aa29.07■■■□□ 2.24
NECAB3-212ENST00000485976 TSR2Q969E8 191 aaKnown RBP29.07■■■□□ 2.24
NECAB3-212ENST00000485976 LTBP3Q9NS15 1303 aa29.07■■■□□ 2.24
NECAB3-212ENST00000485976 CCDC88AQ3V6T2 1871 aa29.06■■■□□ 2.24
NECAB3-212ENST00000485976 GOLGA2Q08379 1002 aa29.06■■■□□ 2.24
NECAB3-212ENST00000485976 NLRP10Q86W26 655 aa29.06■■■□□ 2.24
NECAB3-212ENST00000485976 CACNA1FO60840 1977 aa29.06■■■□□ 2.24
NECAB3-212ENST00000485976 SLC10A5Q5PT55 438 aa29.05■■■□□ 2.24
NECAB3-212ENST00000485976 NFKBIEO00221 500 aa29.04■■■□□ 2.24
NECAB3-212ENST00000485976 HOXA10P31260 410 aaPredicted RBP29.04■■■□□ 2.24
NECAB3-212ENST00000485976 RASSF7Q02833 373 aa29.04■■■□□ 2.24
NECAB3-212ENST00000485976 RPGRQ92834 1020 aaKnown RBP29.04■■■□□ 2.24
NECAB3-212ENST00000485976 DICER1Q9UPY3 1922 aaKnown RBP29.04■■■□□ 2.24
NECAB3-212ENST00000485976 TWISTNBQ3B726 338 aaPredicted RBP29.03■■■□□ 2.24
NECAB3-212ENST00000485976 TSPYL6Q8N831 410 aa29.03■■■□□ 2.24
NECAB3-212ENST00000485976 C7orf43Q8WVR3 580 aa29.03■■■□□ 2.24
NECAB3-212ENST00000485976 NLRP3Q96P20 1036 aa29.03■■■□□ 2.24
NECAB3-212ENST00000485976 STK31Q9BXU1 1019 aa29.03■■■□□ 2.24
NECAB3-212ENST00000485976 FANCIQ9NVI1 1328 aa29.02■■■□□ 2.24
NECAB3-212ENST00000485976 SENP3-EIF4A1A0A087X0R7 540 aa29.02■■■□□ 2.24
NECAB3-212ENST00000485976 DDX58O95786 925 aaKnown RBP29.02■■■□□ 2.24
NECAB3-212ENST00000485976 CCDC93Q567U6 631 aa29.02■■■□□ 2.24
NECAB3-212ENST00000485976 SH3TC1Q8TE82 1336 aa29.01■■■□□ 2.23
NECAB3-212ENST00000485976 TRIM28Q13263 835 aaKnown RBP29.01■■■□□ 2.23
NECAB3-212ENST00000485976 ISCA1Q9BUE6 129 aa29.01■■■□□ 2.23
NECAB3-212ENST00000485976 TAOK3Q9H2K8 898 aa29.01■■■□□ 2.23
NECAB3-212ENST00000485976 TRMT112Q9UI30 125 aaKnown RBP29.01■■■□□ 2.23
NECAB3-212ENST00000485976 SALL2Q9Y467 1007 aaPredicted RBP29.01■■■□□ 2.23
NECAB3-212ENST00000485976 CCER2I3L3R5 266 aa29■■■□□ 2.23
NECAB3-212ENST00000485976 RIC3Q7Z5B4 369 aa29■■■□□ 2.23
NECAB3-212ENST00000485976 ZNF526Q8TF50 670 aaPredicted RBP29■■■□□ 2.23
NECAB3-212ENST00000485976 RBM17Q96I25 401 aaKnown RBP29■■■□□ 2.23
NECAB3-212ENST00000485976 CRAMP1Q96RY5 1269 aa29■■■□□ 2.23
NECAB3-212ENST00000485976 MYH16Q9H6N6 1097 aa29■■■□□ 2.23
NECAB3-212ENST00000485976 ZNF219Q9P2Y4 722 aaPredicted RBP29■■■□□ 2.23
NECAB3-212ENST00000485976 CC2D2BQ6DHV5 1058 aa28.99■■■□□ 2.23
NECAB3-212ENST00000485976 PHAXQ9H814 394 aaKnown RBP28.99■■■□□ 2.23
NECAB3-212ENST00000485976 TIAM2Q8IVF5 1701 aa28.99■■■□□ 2.23
NECAB3-212ENST00000485976 KDM2BQ8NHM5 1336 aa28.98■■■□□ 2.23
NECAB3-212ENST00000485976 C1QTNF8P60827 252 aa28.98■■■□□ 2.23
NECAB3-212ENST00000485976 GRIPAP1Q4V328 841 aa28.98■■■□□ 2.23
NECAB3-212ENST00000485976 RTKN2Q8IZC4 609 aa28.98■■■□□ 2.23
NECAB3-212ENST00000485976 LAMB2P55268 1798 aa28.97■■■□□ 2.23
NECAB3-212ENST00000485976 PRELPP51888 382 aa28.94■■■□□ 2.22
NECAB3-212ENST00000485976 HSP90B1P14625 803 aaKnown RBP28.93■■■□□ 2.22
NECAB3-212ENST00000485976 FKBP4Q02790 459 aaKnown RBP eCLIP28.93■■■□□ 2.221e-11■■■■■ 50.7
NECAB3-212ENST00000485976 ZNF521Q96K83 1311 aa28.93■■■□□ 2.22
NECAB3-212ENST00000485976 DDX60Q8IY21 1712 aaKnown RBP28.92■■■□□ 2.22
NECAB3-212ENST00000485976 ATP5J2-PTCD1G3V325 749 aa28.92■■■□□ 2.22
NECAB3-212ENST00000485976 CCDC191Q8NCU4 936 aa28.92■■■□□ 2.22
NECAB3-212ENST00000485976 KIF3CO14782 793 aa28.91■■■□□ 2.22
NECAB3-212ENST00000485976 KSR2Q6VAB6 950 aa28.91■■■□□ 2.22
NECAB3-212ENST00000485976 C3orf67Q6ZVT6 689 aa28.91■■■□□ 2.22
NECAB3-212ENST00000485976 METTL22Q9BUU2 404 aaPredicted RBP28.91■■■□□ 2.22
NECAB3-212ENST00000485976 VAMP4O75379 141 aa28.9■■■□□ 2.22
NECAB3-212ENST00000485976 SLC4A2P04920 1241 aa28.9■■■□□ 2.22
NECAB3-212ENST00000485976 HCLS1P14317 486 aaPredicted RBP28.9■■■□□ 2.22
NECAB3-212ENST00000485976 PSMD1Q99460 953 aa28.9■■■□□ 2.22
NECAB3-212ENST00000485976 TMX4Q9H1E5 349 aaPredicted RBP28.9■■■□□ 2.22
NECAB3-212ENST00000485976 SNED1Q8TER0 1413 aa28.89■■■□□ 2.22
NECAB3-212ENST00000485976 GLTPD2A6NH11 291 aa28.89■■■□□ 2.22
NECAB3-212ENST00000485976 PPEF1O14829 653 aaPredicted RBP28.89■■■□□ 2.22
NECAB3-212ENST00000485976 EXOSC9Q06265 439 aaKnown RBP28.89■■■□□ 2.22
NECAB3-212ENST00000485976 ZBTB38Q8NAP3 1195 aaPredicted RBP28.89■■■□□ 2.22
NECAB3-212ENST00000485976 MYD88Q99836 296 aa28.89■■■□□ 2.22
NECAB3-212ENST00000485976 DPY19L2Q6NUT2 758 aa28.88■■■□□ 2.21
NECAB3-212ENST00000485976 DDX46Q7L014 1031 aaKnown RBP28.88■■■□□ 2.21
NECAB3-212ENST00000485976 FAM89AQ96GI7 184 aa28.88■■■□□ 2.21
NECAB3-212ENST00000485976 SPINK5Q9NQ38 1064 aaPredicted RBP28.88■■■□□ 2.21
NECAB3-212ENST00000485976 BBOX1O75936 387 aa28.87■■■□□ 2.21
NECAB3-212ENST00000485976 NEXNQ0ZGT2 675 aa28.87■■■□□ 2.21
NECAB3-212ENST00000485976 SYNE4Q8N205 404 aa28.87■■■□□ 2.21
NECAB3-212ENST00000485976 CWC25Q9NXE8 425 aaPredicted RBP28.87■■■□□ 2.21
NECAB3-212ENST00000485976 MAP3K2Q9Y2U5 619 aa28.87■■■□□ 2.21
NECAB3-212ENST00000485976 ABCC4O15439 1325 aa28.87■■■□□ 2.21
NECAB3-212ENST00000485976 PI4KAP2A4QPH2 592 aa28.86■■■□□ 2.21
NECAB3-212ENST00000485976 SF3B3Q15393 1217 aaKnown RBP28.86■■■□□ 2.21
NECAB3-212ENST00000485976 TMC4Q7Z404 712 aa28.86■■■□□ 2.21
NECAB3-212ENST00000485976 PI4KAP1Q8N8J0 262 aa28.86■■■□□ 2.21
NECAB3-212ENST00000485976 NMRK2Q9NPI5 230 aa28.86■■■□□ 2.21
NECAB3-212ENST00000485976 PCCAP05165 728 aaPredicted RBP28.85■■■□□ 2.21
NECAB3-212ENST00000485976 FLIIQ13045 1269 aa28.85■■■□□ 2.21
NECAB3-212ENST00000485976 IRS4O14654 1257 aaPredicted RBP28.84■■■□□ 2.21
NECAB3-212ENST00000485976 GRAPQ13588 217 aa28.84■■■□□ 2.21
NECAB3-212ENST00000485976 OLFM4Q6UX06 510 aa28.84■■■□□ 2.21
NECAB3-212ENST00000485976 GRAPLQ8TC17 118 aaPredicted RBP28.84■■■□□ 2.21
NECAB3-212ENST00000485976 ATP6V0A2Q9Y487 856 aa28.84■■■□□ 2.21
NECAB3-212ENST00000485976 TCERG1O14776 1098 aaKnown RBP28.83■■■□□ 2.21
NECAB3-212ENST00000485976 TOMM70O94826 608 aa28.83■■■□□ 2.21
NECAB3-212ENST00000485976 E9PSI1 815 aa28.82■■■□□ 2.2
NECAB3-212ENST00000485976 IARSP41252 1262 aaKnown RBP28.82■■■□□ 2.2
NECAB3-212ENST00000485976 C16orf71Q8IYS4 520 aaPredicted RBP28.82■■■□□ 2.2
NECAB3-212ENST00000485976 WDR90Q96KV7 1748 aa28.82■■■□□ 2.2
NECAB3-212ENST00000485976 G2E3Q7L622 706 aa28.81■■■□□ 2.2
NECAB3-212ENST00000485976 ZNF277Q9NRM2 450 aaPredicted RBP28.81■■■□□ 2.2
NECAB3-212ENST00000485976 FKBP5Q13451 457 aaPredicted RBP28.8■■■□□ 2.2
NECAB3-212ENST00000485976 SP8Q8IXZ3 490 aa28.8■■■□□ 2.2
NECAB3-212ENST00000485976 VPS33BQ9H267 617 aa28.8■■■□□ 2.2
NECAB3-212ENST00000485976 CDHR2Q9BYE9 1310 aa28.79■■■□□ 2.2
NECAB3-212ENST00000485976 VEGFAP15692 232 aaPredicted RBP28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms