RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ETNK1Q9HBU6 452 aa6.24□□□□□ -1.41
RTN4-213ENST00000485749 NDFIP2Q9NV92 336 aa6.24□□□□□ -1.41
RTN4-213ENST00000485749 DNAAF2Q9NVR5 837 aaKnown RBP6.24□□□□□ -1.41
RTN4-213ENST00000485749 ATXN7O15265 892 aaPredicted RBP6.23□□□□□ -1.41
RTN4-213ENST00000485749 BNIP3LO60238 219 aa6.23□□□□□ -1.41
RTN4-213ENST00000485749 ICMTO60725 284 aa6.23□□□□□ -1.41
RTN4-213ENST00000485749 INHAP05111 366 aa6.23□□□□□ -1.41
RTN4-213ENST00000485749 THBS1P07996 1170 aa6.23□□□□□ -1.41
RTN4-213ENST00000485749 GDF10P55107 478 aa6.23□□□□□ -1.41
RTN4-213ENST00000485749 XP32Q5T750 250 aa6.23□□□□□ -1.41
RTN4-213ENST00000485749 C1orf229Q6ZS94 237 aaPredicted RBP6.23□□□□□ -1.41
RTN4-213ENST00000485749 FBXO33Q7Z6M2 555 aa6.23□□□□□ -1.41
RTN4-213ENST00000485749 AIDAQ96BJ3 306 aa6.23□□□□□ -1.41
RTN4-213ENST00000485749 BTBD6Q96KE9 485 aa6.23□□□□□ -1.41
RTN4-213ENST00000485749 CXXC1Q9P0U4 656 aaPredicted RBP6.23□□□□□ -1.41
RTN4-213ENST00000485749 DKK1O94907 266 aa6.22□□□□□ -1.41
RTN4-213ENST00000485749 COL8A1P27658 744 aa6.22□□□□□ -1.41
RTN4-213ENST00000485749 SEC13P55735 322 aa6.22□□□□□ -1.41
RTN4-213ENST00000485749 CLDN10P78369 228 aa6.22□□□□□ -1.41
RTN4-213ENST00000485749 IRX6P78412 446 aaPredicted RBP6.22□□□□□ -1.41
RTN4-213ENST00000485749 ARSJQ5FYB0 599 aaPredicted RBP6.22□□□□□ -1.41
RTN4-213ENST00000485749 LINC00114Q6XXX2 140 aa6.22□□□□□ -1.41
RTN4-213ENST00000485749 ZSCAN29Q8IWY8 852 aaPredicted RBP6.22□□□□□ -1.41
RTN4-213ENST00000485749 SREK1Q8WXA9 508 aaKnown RBP6.22□□□□□ -1.41
RTN4-213ENST00000485749 ASB16Q96NS5 453 aa6.22□□□□□ -1.41
RTN4-213ENST00000485749 PLCD4Q9BRC7 762 aa6.22□□□□□ -1.41
RTN4-213ENST00000485749 ZCCHC2Q9C0B9 1178 aaKnown RBP6.22□□□□□ -1.41
RTN4-213ENST00000485749 ZDHHC3Q9NYG2 299 aa6.22□□□□□ -1.41
RTN4-213ENST00000485749 RBM19Q9Y4C8 960 aaKnown RBP6.22□□□□□ -1.41
RTN4-213ENST00000485749 NEURL1BA8MQ27 555 aa6.21□□□□□ -1.42
RTN4-213ENST00000485749 ZBTB7BO15156 539 aaPredicted RBP6.21□□□□□ -1.42
RTN4-213ENST00000485749 DGKGP49619 791 aa6.21□□□□□ -1.42
RTN4-213ENST00000485749 SMTNP53814 917 aa6.21□□□□□ -1.42
RTN4-213ENST00000485749 ZC3H6P61129 1189 aaKnown RBP6.21□□□□□ -1.42
RTN4-213ENST00000485749 CTBSQ01459 385 aa6.21□□□□□ -1.42
RTN4-213ENST00000485749 OCLNQ16625 522 aa6.21□□□□□ -1.42
RTN4-213ENST00000485749 DCTN4Q9UJW0 460 aa6.21□□□□□ -1.42
RTN4-213ENST00000485749 PRR12Q9ULL5 1215 aa6.21□□□□□ -1.42
RTN4-213ENST00000485749 C2CD2LO14523 706 aa6.2□□□□□ -1.42
RTN4-213ENST00000485749 C21orf2O43822 256 aa6.2□□□□□ -1.42
RTN4-213ENST00000485749 ALAS2P22557 587 aa6.2□□□□□ -1.42
RTN4-213ENST00000485749 SF3B2Q13435 895 aaKnown RBP6.2□□□□□ -1.42
RTN4-213ENST00000485749 LAMC2Q13753 1193 aa6.2□□□□□ -1.42
RTN4-213ENST00000485749 TSGA10IPQ3SY00 556 aa6.2□□□□□ -1.42
RTN4-213ENST00000485749 CHSY3Q70JA7 882 aa6.2□□□□□ -1.42
RTN4-213ENST00000485749 C1QTNF9BB2RNN3 333 aa6.19□□□□□ -1.42
RTN4-213ENST00000485749 BACH1O14867 736 aa6.19□□□□□ -1.42
RTN4-213ENST00000485749 KHNYNO15037 678 aaKnown RBP6.19□□□□□ -1.42
RTN4-213ENST00000485749 FURINP09958 794 aa6.19□□□□□ -1.42
RTN4-213ENST00000485749 FAM157BP0CG42 384 aa6.19□□□□□ -1.42
RTN4-213ENST00000485749 MAPTP10636 758 aaKnown RBP6.19□□□□□ -1.42
RTN4-213ENST00000485749 FKBP4Q02790 459 aaKnown RBP eCLIP6.19□□□□□ -1.42
RTN4-213ENST00000485749 TMED8Q6PL24 325 aaPredicted RBP6.19□□□□□ -1.42
RTN4-213ENST00000485749 GLYCTKQ8IVS8 523 aa6.19□□□□□ -1.42
RTN4-213ENST00000485749 TEX2Q8IWB9 1127 aa6.19□□□□□ -1.42
RTN4-213ENST00000485749 ANKRD13AQ8IZ07 590 aa6.19□□□□□ -1.42
RTN4-213ENST00000485749 ZNF594Q96JF6 807 aaPredicted RBP6.19□□□□□ -1.42
RTN4-213ENST00000485749 A0A1W2PNR3 127 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 H3BRB1 525 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 M0R2N6 131 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 CDK2AP1O14519 115 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 PTCD1O75127 700 aaKnown RBP6.18□□□□□ -1.42
RTN4-213ENST00000485749 ABL1P00519 1130 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 SPATA31C1P0DKV0 1188 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 ATP4AP20648 1035 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 TNP2Q05952 138 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 SF3A1Q15459 793 aaKnown RBP6.18□□□□□ -1.42
RTN4-213ENST00000485749 SAMD5Q5TGI4 173 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 BICDL1Q6ZP65 573 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 COL26A1Q96A83 441 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 SUV39H2Q9H5I1 410 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 TUT1Q9H6E5 874 aaKnown RBP6.18□□□□□ -1.42
RTN4-213ENST00000485749 MARK1Q9P0L2 795 aa6.18□□□□□ -1.42
RTN4-213ENST00000485749 DCDC2BA2VCK2 349 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 A6NJY4 79 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 PRMT3O60678 531 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 CENPBP07199 599 aaPredicted RBP6.17□□□□□ -1.42
RTN4-213ENST00000485749 MAPK1P28482 360 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 ITGAEP38570 1179 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 SCNN1DP51172 638 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 GTF2IP78347 998 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 NEUROD1Q13562 356 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 ECM1Q16610 540 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 PRRT3Q5FWE3 981 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 ZNF468Q5VIY5 522 aaPredicted RBP6.17□□□□□ -1.42
RTN4-213ENST00000485749 CCDC102BQ68D86 513 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 CD163Q86VB7 1156 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 RGL4Q8IZJ4 473 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 Q8N3U1 123 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 UBXN4Q92575 508 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 SLC4A9Q96Q91 983 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 PRDM16Q9HAZ2 1276 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 NEUROD4Q9HD90 331 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 CABP1Q9NZU7 370 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 GPC6Q9Y625 555 aaPredicted RBP6.17□□□□□ -1.42
RTN4-213ENST00000485749 CLSPNQ9HAW4 1339 aa6.17□□□□□ -1.42
RTN4-213ENST00000485749 RECKO95980 971 aa6.16□□□□□ -1.42
RTN4-213ENST00000485749 HOXB4P17483 251 aaPredicted RBP6.16□□□□□ -1.42
RTN4-213ENST00000485749 GATA4P43694 442 aa6.16□□□□□ -1.42
RTN4-213ENST00000485749 MTFR1Q15390 333 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms