RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 NLRP10Q86W26 655 aa16.18■□□□□ 0.18
SDHB-207ENST00000485515 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
SDHB-207ENST00000485515 SH3TC1Q8TE82 1336 aa16.18■□□□□ 0.18
SDHB-207ENST00000485515 KLRG2A4D1S0 409 aaPredicted RBP16.17■□□□□ 0.18
SDHB-207ENST00000485515 TCERG1O14776 1098 aaKnown RBP16.17■□□□□ 0.18
SDHB-207ENST00000485515 NEXNQ0ZGT2 675 aa16.17■□□□□ 0.18
SDHB-207ENST00000485515 ATP5J2-PTCD1G3V325 749 aa16.16■□□□□ 0.18
SDHB-207ENST00000485515 TRIM28Q13263 835 aaKnown RBP16.16■□□□□ 0.18
SDHB-207ENST00000485515 KSR2Q6VAB6 950 aa16.16■□□□□ 0.18
SDHB-207ENST00000485515 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
SDHB-207ENST00000485515 BRCA1P38398 1863 aaKnown RBP16.16■□□□□ 0.18
SDHB-207ENST00000485515 FKBP5Q13451 457 aaPredicted RBP16.15■□□□□ 0.18
SDHB-207ENST00000485515 SLC10A5Q5PT55 438 aa16.15■□□□□ 0.18
SDHB-207ENST00000485515 PRPF40BQ6NWY9 871 aaKnown RBP16.15■□□□□ 0.18
SDHB-207ENST00000485515 ANKRD31Q8N7Z5 1873 aa16.15■□□□□ 0.18
SDHB-207ENST00000485515 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
SDHB-207ENST00000485515 MYD88Q99836 296 aa16.15■□□□□ 0.18
SDHB-207ENST00000485515 ISCA1Q9BUE6 129 aa16.15■□□□□ 0.18
SDHB-207ENST00000485515 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
SDHB-207ENST00000485515 ARFGEF1Q9Y6D6 1849 aa16.15■□□□□ 0.18
SDHB-207ENST00000485515 RIC1Q4ADV7 1423 aa16.14■□□□□ 0.17
SDHB-207ENST00000485515 DLEC1Q9Y238 1755 aa16.14■□□□□ 0.17
SDHB-207ENST00000485515 PI4KAP2A4QPH2 592 aa16.14■□□□□ 0.17
SDHB-207ENST00000485515 C21orf2O43822 256 aa16.14■□□□□ 0.17
SDHB-207ENST00000485515 FLIIQ13045 1269 aa16.14■□□□□ 0.17
SDHB-207ENST00000485515 CRY2Q49AN0 593 aa16.14■□□□□ 0.17
SDHB-207ENST00000485515 PI4KAP1Q8N8J0 262 aa16.14■□□□□ 0.17
SDHB-207ENST00000485515 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
SDHB-207ENST00000485515 METTL22Q9BUU2 404 aaPredicted RBP16.14■□□□□ 0.17
SDHB-207ENST00000485515 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
SDHB-207ENST00000485515 ABCC12Q96J65 1359 aa16.13■□□□□ 0.17
SDHB-207ENST00000485515 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
SDHB-207ENST00000485515 CWC25Q9NXE8 425 aaPredicted RBP16.13■□□□□ 0.17
SDHB-207ENST00000485515 ANKRD36CQ5JPF3 1778 aa16.13■□□□□ 0.17
SDHB-207ENST00000485515 ZNF428Q96B54 188 aa16.12■□□□□ 0.17
SDHB-207ENST00000485515 HCLS1P14317 486 aaPredicted RBP16.11■□□□□ 0.17
SDHB-207ENST00000485515 HOXA10P31260 410 aaPredicted RBP16.11■□□□□ 0.17
SDHB-207ENST00000485515 CCDC93Q567U6 631 aa16.11■□□□□ 0.17
SDHB-207ENST00000485515 ZBTB38Q8NAP3 1195 aaPredicted RBP16.11■□□□□ 0.17
SDHB-207ENST00000485515 ZNF784Q8NCA9 323 aaPredicted RBP16.11■□□□□ 0.17
SDHB-207ENST00000485515 FAM89AQ96GI7 184 aa16.11■□□□□ 0.17
SDHB-207ENST00000485515 CRAMP1Q96RY5 1269 aa16.11■□□□□ 0.17
SDHB-207ENST00000485515 CACNA1FO60840 1977 aa16.1■□□□□ 0.17
SDHB-207ENST00000485515 HNRNPUQ00839 825 aaKnown RBP eCLIP16.1■□□□□ 0.17
SDHB-207ENST00000485515 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
SDHB-207ENST00000485515 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
SDHB-207ENST00000485515 C9orf131Q5VYM1 1079 aa16.1■□□□□ 0.17
SDHB-207ENST00000485515 CC2D2BQ6DHV5 1058 aa16.1■□□□□ 0.17
SDHB-207ENST00000485515 DDX46Q7L014 1031 aaKnown RBP16.1■□□□□ 0.17
SDHB-207ENST00000485515 G2E3Q7L622 706 aa16.1■□□□□ 0.17
SDHB-207ENST00000485515 RTKN2Q8IZC4 609 aa16.1■□□□□ 0.17
SDHB-207ENST00000485515 DNAAF4Q8WXU2 420 aa16.1■□□□□ 0.17
SDHB-207ENST00000485515 RNF181Q9P0P0 153 aa16.1■□□□□ 0.17
SDHB-207ENST00000485515 COL11A2P13942 1736 aaPredicted RBP16.1■□□□□ 0.17
SDHB-207ENST00000485515 ARFGEF2Q9Y6D5 1785 aa16.1■□□□□ 0.17
SDHB-207ENST00000485515 IRS4O14654 1257 aaPredicted RBP16.09■□□□□ 0.17
SDHB-207ENST00000485515 CT47B1P0C2W7 299 aaPredicted RBP16.09■□□□□ 0.17
SDHB-207ENST00000485515 LMNB1P20700 586 aa16.09■□□□□ 0.17
SDHB-207ENST00000485515 CDCA7LQ96GN5 454 aa16.09■□□□□ 0.17
SDHB-207ENST00000485515 TAOK3Q9H2K8 898 aa16.09■□□□□ 0.17
SDHB-207ENST00000485515 PCCAP05165 728 aaPredicted RBP16.08■□□□□ 0.16
SDHB-207ENST00000485515 SYNE4Q8N205 404 aa16.08■□□□□ 0.16
SDHB-207ENST00000485515 ADCY9O60503 1353 aa16.08■□□□□ 0.16
SDHB-207ENST00000485515 PPEF1O14829 653 aaPredicted RBP16.07■□□□□ 0.16
SDHB-207ENST00000485515 BBOX1O75936 387 aa16.07■□□□□ 0.16
SDHB-207ENST00000485515 RASSF7Q02833 373 aa16.07■□□□□ 0.16
SDHB-207ENST00000485515 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
SDHB-207ENST00000485515 GPBP1L1Q9HC44 474 aaPredicted RBP16.07■□□□□ 0.16
SDHB-207ENST00000485515 LTBP3Q9NS15 1303 aa16.06■□□□□ 0.16
SDHB-207ENST00000485515 ZC3H4Q9UPT8 1303 aaKnown RBP16.06■□□□□ 0.16
SDHB-207ENST00000485515 NEURL1BA8MQ27 555 aa16.06■□□□□ 0.16
SDHB-207ENST00000485515 PDE8AO60658 829 aa16.06■□□□□ 0.16
SDHB-207ENST00000485515 SF3B3Q15393 1217 aaKnown RBP16.06■□□□□ 0.16
SDHB-207ENST00000485515 ALDH1L2Q3SY69 923 aa16.06■□□□□ 0.16
SDHB-207ENST00000485515 C3orf67Q6ZVT6 689 aa16.06■□□□□ 0.16
SDHB-207ENST00000485515 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
SDHB-207ENST00000485515 TRMT2AQ8IZ69 625 aaKnown RBP16.06■□□□□ 0.16
SDHB-207ENST00000485515 C7orf43Q8WVR3 580 aa16.06■□□□□ 0.16
SDHB-207ENST00000485515 SLX4Q8IY92 1834 aa16.05■□□□□ 0.16
SDHB-207ENST00000485515 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
SDHB-207ENST00000485515 NFKBIEO00221 500 aa16.05■□□□□ 0.16
SDHB-207ENST00000485515 IGKV5-2P06315 115 aa16.05■□□□□ 0.16
SDHB-207ENST00000485515 CWF19L2Q2TBE0 894 aaKnown RBP16.05■□□□□ 0.16
SDHB-207ENST00000485515 CCDC152Q4G0S7 254 aa16.05■□□□□ 0.16
SDHB-207ENST00000485515 ZNF526Q8TF50 670 aaPredicted RBP16.05■□□□□ 0.16
SDHB-207ENST00000485515 CACNA1SQ13698 1873 aa16.04■□□□□ 0.16
SDHB-207ENST00000485515 PTPRCP08575 1304 aa16.04■□□□□ 0.16
SDHB-207ENST00000485515 KDM2BQ8NHM5 1336 aa16.04■□□□□ 0.16
SDHB-207ENST00000485515 CDHR2Q9BYE9 1310 aa16.04■□□□□ 0.16
SDHB-207ENST00000485515 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
SDHB-207ENST00000485515 GRAPQ13588 217 aa16.04■□□□□ 0.16
SDHB-207ENST00000485515 SLC4A10Q6U841 1118 aa16.04■□□□□ 0.16
SDHB-207ENST00000485515 GRAPLQ8TC17 118 aaPredicted RBP16.04■□□□□ 0.16
SDHB-207ENST00000485515 ABCC4O15439 1325 aa16.03■□□□□ 0.16
SDHB-207ENST00000485515 GCKRQ14397 625 aa16.03■□□□□ 0.16
SDHB-207ENST00000485515 DPY19L2Q6NUT2 758 aa16.03■□□□□ 0.16
SDHB-207ENST00000485515 SMC4Q9NTJ3 1288 aa16.03■□□□□ 0.16
SDHB-207ENST00000485515 ATP6V0A2Q9Y487 856 aa16.03■□□□□ 0.16
SDHB-207ENST00000485515 F6X3S4 739 aa16.02■□□□□ 0.16
SDHB-207ENST00000485515 SP8Q8IXZ3 490 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms