RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 SLC6A14Q9UN76 642 aa9.05□□□□□ -0.96
RC3H1-205ENST00000484867 ATP1A2P50993 1020 aa9.04□□□□□ -0.96
RC3H1-205ENST00000484867 TRAPPC3LQ5T215 181 aa9.04□□□□□ -0.96
RC3H1-205ENST00000484867 KRTAP1-3Q8IUG1 177 aa9.04□□□□□ -0.96
RC3H1-205ENST00000484867 SIX5Q8N196 739 aa9.04□□□□□ -0.96
RC3H1-205ENST00000484867 STAG2Q8N3U4 1231 aa9.04□□□□□ -0.96
RC3H1-205ENST00000484867 POM121CA8CG34 1229 aa9.03□□□□□ -0.96
RC3H1-205ENST00000484867 TPRNQ4KMQ1 711 aa9.03□□□□□ -0.96
RC3H1-205ENST00000484867 BTLAQ7Z6A9 289 aa9.03□□□□□ -0.96
RC3H1-205ENST00000484867 TXNRD3Q86VQ6 643 aa9.03□□□□□ -0.96
RC3H1-205ENST00000484867 BHMTQ93088 406 aa9.03□□□□□ -0.96
RC3H1-205ENST00000484867 EFCC1Q9HA90 598 aa9.03□□□□□ -0.96
RC3H1-205ENST00000484867 AFF1P51825 1210 aaKnown RBP9.02□□□□□ -0.97
RC3H1-205ENST00000484867 SHISA2Q6UWI4 295 aa9.02□□□□□ -0.97
RC3H1-205ENST00000484867 OGFOD1Q8N543 542 aa9.02□□□□□ -0.97
RC3H1-205ENST00000484867 TSEN2Q8NCE0 465 aaKnown RBP9.02□□□□□ -0.97
RC3H1-205ENST00000484867 C2orf49Q9BVC5 232 aaPredicted RBP9.02□□□□□ -0.97
RC3H1-205ENST00000484867 GSX2Q9BZM3 304 aa9.02□□□□□ -0.97
RC3H1-205ENST00000484867 NAGPAQ9UK23 515 aa9.02□□□□□ -0.97
RC3H1-205ENST00000484867 PALM3A6NDB9 673 aaPredicted RBP9.01□□□□□ -0.97
RC3H1-205ENST00000484867 ALDH16A1Q8IZ83 802 aa9.01□□□□□ -0.97
RC3H1-205ENST00000484867 DMGDHQ9UI17 866 aaKnown RBP9.01□□□□□ -0.97
RC3H1-205ENST00000484867 ATP9BO43861 1147 aa9□□□□□ -0.97
RC3H1-205ENST00000484867 PPP1R12BO60237 982 aaPredicted RBP8.99□□□□□ -0.97
RC3H1-205ENST00000484867 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
RC3H1-205ENST00000484867 NRG1Q02297 640 aaPredicted RBP8.99□□□□□ -0.97
RC3H1-205ENST00000484867 LRP8Q14114 963 aa8.99□□□□□ -0.97
RC3H1-205ENST00000484867 IER5Q5VY09 327 aa8.99□□□□□ -0.97
RC3H1-205ENST00000484867 FMR1NBQ8N0W7 255 aaPredicted RBP8.99□□□□□ -0.97
RC3H1-205ENST00000484867 UBE2OQ9C0C9 1292 aaKnown RBP8.99□□□□□ -0.97
RC3H1-205ENST00000484867 JPH1Q9HDC5 661 aaPredicted RBP8.99□□□□□ -0.97
RC3H1-205ENST00000484867 DNAJB12Q9NXW2 375 aaKnown RBP8.99□□□□□ -0.97
RC3H1-205ENST00000484867 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
RC3H1-205ENST00000484867 CHMP3Q9Y3E7 222 aa8.99□□□□□ -0.97
RC3H1-205ENST00000484867 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
RC3H1-205ENST00000484867 RAC1P63000 192 aa8.98□□□□□ -0.97
RC3H1-205ENST00000484867 NUDT8Q8WV74 236 aa8.98□□□□□ -0.97
RC3H1-205ENST00000484867 BCS1LQ9Y276 419 aa8.98□□□□□ -0.97
RC3H1-205ENST00000484867 GRIK5Q16478 980 aa8.97□□□□□ -0.97
RC3H1-205ENST00000484867 HDGFL1Q5TGJ6 251 aa8.97□□□□□ -0.97
RC3H1-205ENST00000484867 PSAPL1Q6NUJ1 521 aa8.97□□□□□ -0.97
RC3H1-205ENST00000484867 WWC1Q8IX03 1113 aa8.97□□□□□ -0.97
RC3H1-205ENST00000484867 GAS2L2Q8NHY3 880 aa8.97□□□□□ -0.97
RC3H1-205ENST00000484867 HYAL3O43820 417 aaPredicted RBP8.96□□□□□ -0.98
RC3H1-205ENST00000484867 HIF1AQ16665 826 aa8.95□□□□□ -0.98
RC3H1-205ENST00000484867 DMRTC2Q8IXT2 367 aaPredicted RBP8.95□□□□□ -0.98
RC3H1-205ENST00000484867 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.95□□□□□ -0.98
RC3H1-205ENST00000484867 TBC1D8BQ0IIM8 1120 aa8.94□□□□□ -0.98
RC3H1-205ENST00000484867 CCINQ13939 588 aa8.94□□□□□ -0.98
RC3H1-205ENST00000484867 LCE3BQ5TA77 95 aa8.94□□□□□ -0.98
RC3H1-205ENST00000484867 SCG3Q8WXD2 468 aaKnown RBP8.94□□□□□ -0.98
RC3H1-205ENST00000484867 TP53INP1Q96A56 240 aa8.94□□□□□ -0.98
RC3H1-205ENST00000484867 ZNF594Q96JF6 807 aaPredicted RBP8.94□□□□□ -0.98
RC3H1-205ENST00000484867 IGFLR1Q9H665 355 aa8.94□□□□□ -0.98
RC3H1-205ENST00000484867 TGFBR3LH3BV60 316 aa8.93□□□□□ -0.98
RC3H1-205ENST00000484867 MAP3K6O95382 1288 aa8.93□□□□□ -0.98
RC3H1-205ENST00000484867 NFKB1P19838 968 aa8.93□□□□□ -0.98
RC3H1-205ENST00000484867 RTN1Q16799 776 aa8.93□□□□□ -0.98
RC3H1-205ENST00000484867 DTWD1Q8N5C7 304 aa8.93□□□□□ -0.98
RC3H1-205ENST00000484867 ZBTB42B2RXF5 422 aa8.92□□□□□ -0.98
RC3H1-205ENST00000484867 RGS9O75916 674 aaPredicted RBP8.92□□□□□ -0.98
RC3H1-205ENST00000484867 MSL1Q68DK7 614 aa8.92□□□□□ -0.98
RC3H1-205ENST00000484867 NBPF11Q86T75 865 aa8.92□□□□□ -0.98
RC3H1-205ENST00000484867 FBXO11Q86XK2 927 aa8.92□□□□□ -0.98
RC3H1-205ENST00000484867 LPIN3Q9BQK8 851 aa8.92□□□□□ -0.98
RC3H1-205ENST00000484867 INPP5BP32019 993 aa8.91□□□□□ -0.98
RC3H1-205ENST00000484867 PLAURQ03405 335 aa8.91□□□□□ -0.98
RC3H1-205ENST00000484867 FRRS1LQ9P0K9 344 aa8.91□□□□□ -0.98
RC3H1-205ENST00000484867 ZFATQ9P243 1243 aa8.91□□□□□ -0.98
RC3H1-205ENST00000484867 RAD21O60216 631 aa8.9□□□□□ -0.98
RC3H1-205ENST00000484867 SEC13P55735 322 aa8.9□□□□□ -0.98
RC3H1-205ENST00000484867 KRTAP19-1Q8IUB9 90 aa8.9□□□□□ -0.98
RC3H1-205ENST00000484867 TRPM4Q8TD43 1214 aa8.9□□□□□ -0.98
RC3H1-205ENST00000484867 WFDC12Q8WWY7 111 aa8.9□□□□□ -0.98
RC3H1-205ENST00000484867 TTC9Q92623 222 aa8.9□□□□□ -0.98
RC3H1-205ENST00000484867 NGLY1Q96IV0 654 aa8.9□□□□□ -0.98
RC3H1-205ENST00000484867 NOS3P29474 1203 aa8.89□□□□□ -0.99
RC3H1-205ENST00000484867 PERM1Q5SV97 790 aa8.89□□□□□ -0.99
RC3H1-205ENST00000484867 FAM35AQ86V20 835 aa8.89□□□□□ -0.99
RC3H1-205ENST00000484867 C11orf16Q9NQ32 467 aa8.89□□□□□ -0.99
RC3H1-205ENST00000484867 USP21Q9UK80 565 aa8.89□□□□□ -0.99
RC3H1-205ENST00000484867 RASA1P20936 1047 aa8.88□□□□□ -0.99
RC3H1-205ENST00000484867 CHMP7Q8WUX9 453 aaPredicted RBP8.88□□□□□ -0.99
RC3H1-205ENST00000484867 PNMA5Q96PV4 448 aa8.88□□□□□ -0.99
RC3H1-205ENST00000484867 DEAF1O75398 565 aaPredicted RBP8.87□□□□□ -0.99
RC3H1-205ENST00000484867 IGFBP4P22692 258 aa8.87□□□□□ -0.99
RC3H1-205ENST00000484867 PCSK7Q16549 785 aa8.87□□□□□ -0.99
RC3H1-205ENST00000484867 IFT43Q96FT9 208 aa8.87□□□□□ -0.99
RC3H1-205ENST00000484867 RNF112Q9ULX5 631 aa8.87□□□□□ -0.99
RC3H1-205ENST00000484867 MAFBQ9Y5Q3 323 aaPredicted RBP8.87□□□□□ -0.99
RC3H1-205ENST00000484867 CPB1P15086 417 aa8.86□□□□□ -0.99
RC3H1-205ENST00000484867 IREB2P48200 963 aaKnown RBP8.86□□□□□ -0.99
RC3H1-205ENST00000484867 IGF2-ASQ6U949 168 aa8.86□□□□□ -0.99
RC3H1-205ENST00000484867 MEGF10Q96KG7 1140 aa8.86□□□□□ -0.99
RC3H1-205ENST00000484867 TFIP11Q9UBB9 837 aaKnown RBP8.86□□□□□ -0.99
RC3H1-205ENST00000484867 DLL1O00548 723 aa8.85□□□□□ -0.99
RC3H1-205ENST00000484867 UBTFP17480 764 aaKnown RBP8.85□□□□□ -0.99
RC3H1-205ENST00000484867 IDH3AP50213 366 aa8.85□□□□□ -0.99
RC3H1-205ENST00000484867 GPLD1P80108 840 aa8.85□□□□□ -0.99
RC3H1-205ENST00000484867 FLIIQ13045 1269 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms