RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 POTEIP0CG38 1075 aa19.41■□□□□ 0.7
HLA-F-226ENST00000484704 POTEJP0CG39 1038 aa19.41■□□□□ 0.7
HLA-F-226ENST00000484704 PARP10Q53GL7 1025 aa19.41■□□□□ 0.7
HLA-F-226ENST00000484704 MASTLQ96GX5 879 aa19.41■□□□□ 0.7
HLA-F-226ENST00000484704 HYPKQ9NX55 129 aa19.41■□□□□ 0.7
HLA-F-226ENST00000484704 DLEC1Q9Y238 1755 aa19.4■□□□□ 0.7
HLA-F-226ENST00000484704 DDNO94850 711 aaPredicted RBP19.4■□□□□ 0.7
HLA-F-226ENST00000484704 STYK1Q6J9G0 422 aa19.4■□□□□ 0.7
HLA-F-226ENST00000484704 NUTM1Q86Y26 1132 aa19.4■□□□□ 0.7
HLA-F-226ENST00000484704 TSR2Q969E8 191 aaKnown RBP19.4■□□□□ 0.7
HLA-F-226ENST00000484704 SRGNP10124 158 aa19.39■□□□□ 0.69
HLA-F-226ENST00000484704 NPR1P16066 1061 aa19.39■□□□□ 0.69
HLA-F-226ENST00000484704 CCDC88AQ3V6T2 1871 aa19.38■□□□□ 0.69
HLA-F-226ENST00000484704 SUSD4Q5VX71 490 aa19.38■□□□□ 0.69
HLA-F-226ENST00000484704 LRP10Q7Z4F1 713 aa19.38■□□□□ 0.69
HLA-F-226ENST00000484704 ZNF34Q8IZ26 560 aa19.38■□□□□ 0.69
HLA-F-226ENST00000484704 IL16Q14005 1332 aa19.37■□□□□ 0.69
HLA-F-226ENST00000484704 UBN2Q6ZU65 1347 aa19.37■□□□□ 0.69
HLA-F-226ENST00000484704 GOLGA2Q08379 1002 aa19.37■□□□□ 0.69
HLA-F-226ENST00000484704 NCBP3Q53F19 620 aaKnown RBP19.37■□□□□ 0.69
HLA-F-226ENST00000484704 CCDC30Q5VVM6 783 aa19.37■□□□□ 0.69
HLA-F-226ENST00000484704 C8orf58Q8NAV2 365 aa19.37■□□□□ 0.69
HLA-F-226ENST00000484704 UTP14AQ9BVJ6 771 aaKnown RBP19.37■□□□□ 0.69
HLA-F-226ENST00000484704 COL11A2P13942 1736 aaPredicted RBP19.37■□□□□ 0.69
HLA-F-226ENST00000484704 PRPF40BQ6NWY9 871 aaKnown RBP19.36■□□□□ 0.69
HLA-F-226ENST00000484704 ANKRD13DQ6ZTN6 518 aa19.36■□□□□ 0.69
HLA-F-226ENST00000484704 RIC3Q7Z5B4 369 aa19.36■□□□□ 0.69
HLA-F-226ENST00000484704 PLBD2Q8NHP8 589 aa19.36■□□□□ 0.69
HLA-F-226ENST00000484704 RPGRQ92834 1020 aaKnown RBP19.36■□□□□ 0.69
HLA-F-226ENST00000484704 STK31Q9BXU1 1019 aa19.36■□□□□ 0.69
HLA-F-226ENST00000484704 TAOK3Q9H2K8 898 aa19.36■□□□□ 0.69
HLA-F-226ENST00000484704 CACNA1SQ13698 1873 aa19.35■□□□□ 0.69
HLA-F-226ENST00000484704 IBTKQ9P2D0 1353 aaPredicted RBP19.35■□□□□ 0.69
HLA-F-226ENST00000484704 TIAM2Q8IVF5 1701 aa19.35■□□□□ 0.69
HLA-F-226ENST00000484704 ALDH1B1P30837 517 aa19.35■□□□□ 0.69
HLA-F-226ENST00000484704 TCIRG1Q13488 830 aa19.35■□□□□ 0.69
HLA-F-226ENST00000484704 SOGA3Q5TF21 947 aa19.35■□□□□ 0.69
HLA-F-226ENST00000484704 CHADLQ6NUI6 762 aa19.35■□□□□ 0.69
HLA-F-226ENST00000484704 WDR63Q8IWG1 891 aa19.35■□□□□ 0.69
HLA-F-226ENST00000484704 MKRN1Q9UHC7 482 aaKnown RBP19.35■□□□□ 0.69
HLA-F-226ENST00000484704 LTBP3Q9NS15 1303 aa19.34■□□□□ 0.69
HLA-F-226ENST00000484704 TRMT112Q9UI30 125 aaKnown RBP19.34■□□□□ 0.69
HLA-F-226ENST00000484704 ABCC12Q96J65 1359 aa19.33■□□□□ 0.69
HLA-F-226ENST00000484704 NTSR2O95665 410 aa19.33■□□□□ 0.68
HLA-F-226ENST00000484704 TWISTNBQ3B726 338 aaPredicted RBP19.33■□□□□ 0.68
HLA-F-226ENST00000484704 C7orf43Q8WVR3 580 aa19.33■□□□□ 0.68
HLA-F-226ENST00000484704 NLRP3Q96P20 1036 aa19.33■□□□□ 0.68
HLA-F-226ENST00000484704 DDX58O95786 925 aaKnown RBP19.32■□□□□ 0.68
HLA-F-226ENST00000484704 OLFM4Q6UX06 510 aa19.32■□□□□ 0.68
HLA-F-226ENST00000484704 NLRP10Q86W26 655 aa19.32■□□□□ 0.68
HLA-F-226ENST00000484704 TSPYL6Q8N831 410 aa19.32■□□□□ 0.68
HLA-F-226ENST00000484704 RBM17Q96I25 401 aaKnown RBP19.32■□□□□ 0.68
HLA-F-226ENST00000484704 PHAXQ9H814 394 aaKnown RBP19.32■□□□□ 0.68
HLA-F-226ENST00000484704 CREBZFQ9NS37 354 aa19.32■□□□□ 0.68
HLA-F-226ENST00000484704 SLX4Q8IY92 1834 aa19.32■□□□□ 0.68
HLA-F-226ENST00000484704 ANKRD36CQ5JPF3 1778 aa19.32■□□□□ 0.68
HLA-F-226ENST00000484704 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
HLA-F-226ENST00000484704 KLRG2A4D1S0 409 aaPredicted RBP19.31■□□□□ 0.68
HLA-F-226ENST00000484704 CCDC93Q567U6 631 aa19.31■□□□□ 0.68
HLA-F-226ENST00000484704 TMX4Q9H1E5 349 aaPredicted RBP19.31■□□□□ 0.68
HLA-F-226ENST00000484704 MYH16Q9H6N6 1097 aa19.31■□□□□ 0.68
HLA-F-226ENST00000484704 FER1L6Q2WGJ9 1857 aa19.31■□□□□ 0.68
HLA-F-226ENST00000484704 FANCIQ9NVI1 1328 aa19.3■□□□□ 0.68
HLA-F-226ENST00000484704 ATP5J2-PTCD1G3V325 749 aa19.3■□□□□ 0.68
HLA-F-226ENST00000484704 TCERG1O14776 1098 aaKnown RBP19.3■□□□□ 0.68
HLA-F-226ENST00000484704 ZNF428Q96B54 188 aa19.3■□□□□ 0.68
HLA-F-226ENST00000484704 SH3TC1Q8TE82 1336 aa19.29■□□□□ 0.68
HLA-F-226ENST00000484704 RIC1Q4ADV7 1423 aa19.28■□□□□ 0.68
HLA-F-226ENST00000484704 TAF1DQ9H5J8 278 aaPredicted RBP19.28■□□□□ 0.68
HLA-F-226ENST00000484704 ZNF277Q9NRM2 450 aaPredicted RBP19.28■□□□□ 0.68
HLA-F-226ENST00000484704 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.68
HLA-F-226ENST00000484704 HCLS1P14317 486 aaPredicted RBP19.27■□□□□ 0.68
HLA-F-226ENST00000484704 CRY2Q49AN0 593 aa19.27■□□□□ 0.68
HLA-F-226ENST00000484704 MYD88Q99836 296 aa19.27■□□□□ 0.68
HLA-F-226ENST00000484704 PASKQ96RG2 1323 aa19.26■□□□□ 0.67
HLA-F-226ENST00000484704 ZNF541Q9H0D2 1346 aa19.26■□□□□ 0.67
HLA-F-226ENST00000484704 DICER1Q9UPY3 1922 aaKnown RBP19.26■□□□□ 0.67
HLA-F-226ENST00000484704 CCER2I3L3R5 266 aa19.26■□□□□ 0.67
HLA-F-226ENST00000484704 FOXN1O15353 648 aa19.26■□□□□ 0.67
HLA-F-226ENST00000484704 SLC4A2P04920 1241 aa19.26■□□□□ 0.67
HLA-F-226ENST00000484704 EXOSC9Q06265 439 aaKnown RBP19.26■□□□□ 0.67
HLA-F-226ENST00000484704 SLC10A5Q5PT55 438 aa19.26■□□□□ 0.67
HLA-F-226ENST00000484704 RTKN2Q8IZC4 609 aa19.26■□□□□ 0.67
HLA-F-226ENST00000484704 L3MBTL3Q96JM7 780 aaPredicted RBP19.26■□□□□ 0.67
HLA-F-226ENST00000484704 ISCA1Q9BUE6 129 aa19.26■□□□□ 0.67
HLA-F-226ENST00000484704 ITGBL1O95965 494 aaPredicted RBP19.25■□□□□ 0.67
HLA-F-226ENST00000484704 NEXNQ0ZGT2 675 aa19.25■□□□□ 0.67
HLA-F-226ENST00000484704 RTL5Q5HYW3 569 aaPredicted RBP19.25■□□□□ 0.67
HLA-F-226ENST00000484704 LDHDQ86WU2 507 aa19.25■□□□□ 0.67
HLA-F-226ENST00000484704 CRAMP1Q96RY5 1269 aa19.25■□□□□ 0.67
HLA-F-226ENST00000484704 IQCA1LA6NCM1 817 aa19.24■□□□□ 0.67
HLA-F-226ENST00000484704 PPEF1O14829 653 aaPredicted RBP19.24■□□□□ 0.67
HLA-F-226ENST00000484704 FKBP4Q02790 459 aaKnown RBP eCLIP19.24■□□□□ 0.67
HLA-F-226ENST00000484704 EAPPQ56P03 285 aaPredicted RBP19.24■□□□□ 0.67
HLA-F-226ENST00000484704 DDX46Q7L014 1031 aaKnown RBP19.24■□□□□ 0.67
HLA-F-226ENST00000484704 FAM89AQ96GI7 184 aa19.24■□□□□ 0.67
HLA-F-226ENST00000484704 CNTNAP1P78357 1384 aa19.23■□□□□ 0.67
HLA-F-226ENST00000484704 HSP90B1P14625 803 aaKnown RBP19.23■□□□□ 0.67
HLA-F-226ENST00000484704 HOXA10P31260 410 aaPredicted RBP19.23■□□□□ 0.67
HLA-F-226ENST00000484704 VEGFBP49765 207 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms