RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 KIAA1211Q6ZU35 1233 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 COPS6Q7L5N1 327 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 XAGE3Q8WTP9 111 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 EVI5LQ96CN4 794 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 INTS4Q96HW7 963 aaKnown RBP8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 KAZALD1Q96I82 304 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 SUCLG2Q96I99 432 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 PHF12Q96QT6 1004 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 RAD50Q92878 1312 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 SHANK3Q9BYB0 1731 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 NUP188Q5SRE5 1749 aa8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 CYP2E1P05181 493 aaPredicted RBP8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 IL2RBP14784 551 aa8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 NEK4P51957 841 aa8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 AIMP1Q12904 312 aaKnown RBP8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 CUL4AQ13619 759 aa8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 TOM1L2Q6ZVM7 507 aa8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 TICAM2Q86XR7 235 aa8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 UNC5CLQ8IV45 518 aa8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 PLBD2Q8NHP8 589 aa8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 BICC1Q9H694 974 aaKnown RBP8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 COPRSQ9NQ92 184 aa8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 METRNQ9UJH8 293 aa8.95□□□□□ -0.98
SHROOM3-206ENST00000484236 FSD2A1L4K1 749 aa8.94□□□□□ -0.98
SHROOM3-206ENST00000484236 RABL6Q3YEC7 729 aaPredicted RBP8.94□□□□□ -0.98
SHROOM3-206ENST00000484236 MYD88Q99836 296 aa8.94□□□□□ -0.98
SHROOM3-206ENST00000484236 USP16Q9Y5T5 823 aa8.94□□□□□ -0.98
SHROOM3-206ENST00000484236 TNS2Q63HR2 1409 aa8.94□□□□□ -0.98
SHROOM3-206ENST00000484236 KCPQ6ZWJ8 1503 aa8.94□□□□□ -0.98
SHROOM3-206ENST00000484236 GOLGA6L3A6NEY3 463 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 SASH1O94885 1247 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 BAG4O95429 457 aaKnown RBP8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 MYL6BP14649 208 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 SSFA2P28290 1259 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 MAMSTRQ6ZN01 415 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 AACSQ86V21 672 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 KCNB2Q92953 911 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 TMX3Q96JJ7 454 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 LSG1Q9H089 658 aaKnown RBP8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 SNRKQ9NRH2 765 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 DIAPH3Q9NSV4 1193 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 RFX7Q2KHR2 1363 aa8.93□□□□□ -0.98
SHROOM3-206ENST00000484236 KLHL40Q2TBA0 621 aa8.92□□□□□ -0.98
SHROOM3-206ENST00000484236 TEX13AQ9BXU3 409 aaPredicted RBP8.92□□□□□ -0.98
SHROOM3-206ENST00000484236 TM6SF1Q9BZW5 370 aa8.92□□□□□ -0.98
SHROOM3-206ENST00000484236 PALD1Q9ULE6 856 aa8.92□□□□□ -0.98
SHROOM3-206ENST00000484236 PA2G4Q9UQ80 394 aaKnown RBP8.92□□□□□ -0.98
SHROOM3-206ENST00000484236 COL14A1Q05707 1796 aaKnown RBP8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 LRP6O75581 1613 aa8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 ZNF335Q9H4Z2 1342 aaPredicted RBP8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 H7C1W4 665 aa8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 RFX5P48382 616 aaPredicted RBP8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 MRE11P49959 708 aa8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 CASP7P55210 303 aa8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 EVA1CP58658 441 aa8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 VSIG10Q8N0Z9 540 aa8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 EAF2Q96CJ1 260 aaPredicted RBP8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 TJP1Q07157 1748 aa8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 TOGARAM1Q9Y4F4 1720 aa8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 PLCH1Q4KWH8 1693 aa8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 COL22A1Q8NFW1 1626 aaPredicted RBP8.91□□□□□ -0.98
SHROOM3-206ENST00000484236 A0A087WZG4 1122 aa8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 KDM4FA0A1W2PPD8 638 aa8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 MAP4K4O95819 1239 aaPredicted RBP8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 PDIA4P13667 645 aaKnown RBP8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 ATP5JP18859 108 aa8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 PTPN12Q05209 780 aaKnown RBP8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 CWC27Q6UX04 472 aaKnown RBP8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 CCDC191Q8NCU4 936 aa8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 GPR108Q9NPR9 543 aa8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 CREBZFQ9NS37 354 aa8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 ATG3Q9NT62 314 aa8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 CWC25Q9NXE8 425 aaPredicted RBP8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 SNX14Q9Y5W7 946 aa8.9□□□□□ -0.98
SHROOM3-206ENST00000484236 CCDC171Q6TFL3 1326 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 NBPF26B4DH59 902 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 BRD1O95696 1058 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 C7P10643 843 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 EPHA10Q5JZY3 1008 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 NBPF14Q5TI25 921 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 VPS53Q5VIR6 699 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 NBPF10Q6P3W6 841 aaKnown RBP8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 UBE3BQ7Z3V4 1068 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 CDAN1Q8IWY9 1227 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 ZGPATQ8N5A5 531 aaKnown RBP8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 NBPF15Q8N660 670 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 ZSCAN31Q96LW9 406 aaPredicted RBP8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 TTC14Q96N46 770 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 IL25Q9H293 177 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 ITGB4P16144 1822 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 SPEF2Q9C093 1822 aa8.89□□□□□ -0.99
SHROOM3-206ENST00000484236 JCADQ9P266 1359 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 AHDC1Q5TGY3 1603 aaPredicted RBP8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 ZKSCAN1P17029 563 aaPredicted RBP8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 PSMA5P28066 241 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 TRIM28Q13263 835 aaKnown RBP8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 NECTIN1Q15223 517 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 TNNI3KQ59H18 835 aa8.88□□□□□ -0.99
SHROOM3-206ENST00000484236 RNF20Q5VTR2 975 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms