RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 NUP98P52948 1817 aa17.06■□□□□ 0.32
DNMT3A-213ENST00000484184 HOXA10P31260 410 aaPredicted RBP17.06■□□□□ 0.32
DNMT3A-213ENST00000484184 RGS19P49795 217 aa17.06■□□□□ 0.32
DNMT3A-213ENST00000484184 CC2D2BQ6DHV5 1058 aa17.06■□□□□ 0.32
DNMT3A-213ENST00000484184 CYP4F22Q6NT55 531 aa17.06■□□□□ 0.32
DNMT3A-213ENST00000484184 NUTM1Q86Y26 1132 aa17.06■□□□□ 0.32
DNMT3A-213ENST00000484184 TRAF5O00463 557 aa17.05■□□□□ 0.32
DNMT3A-213ENST00000484184 EIF6P56537 245 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-213ENST00000484184 CNGB1Q14028 1251 aaPredicted RBP17.05■□□□□ 0.32
DNMT3A-213ENST00000484184 GPR101Q96P66 508 aaPredicted RBP17.05■□□□□ 0.32
DNMT3A-213ENST00000484184 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
DNMT3A-213ENST00000484184 GTF2E1P29083 439 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-213ENST00000484184 TLL2Q9Y6L7 1015 aa17.04■□□□□ 0.32
DNMT3A-213ENST00000484184 LAMB4A4D0S4 1761 aa17.04■□□□□ 0.32
DNMT3A-213ENST00000484184 UBN2Q6ZU65 1347 aa17.03■□□□□ 0.32
DNMT3A-213ENST00000484184 ERVV-1B6SEH8 477 aa17.03■□□□□ 0.32
DNMT3A-213ENST00000484184 HTATSF1O43719 755 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-213ENST00000484184 LMOD1P29536 600 aaPredicted RBP17.03■□□□□ 0.32
DNMT3A-213ENST00000484184 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
DNMT3A-213ENST00000484184 LARGE2Q8N3Y3 721 aa17.03■□□□□ 0.32
DNMT3A-213ENST00000484184 RTF1Q92541 710 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-213ENST00000484184 PDE4DIPQ5VU43 2346 aa17.03■□□□□ 0.32
DNMT3A-213ENST00000484184 ECE1P42892 770 aa17.02■□□□□ 0.32
DNMT3A-213ENST00000484184 TAF7Q15545 349 aaPredicted RBP17.02■□□□□ 0.32
DNMT3A-213ENST00000484184 TTLL7Q6ZT98 887 aa17.02■□□□□ 0.32
DNMT3A-213ENST00000484184 CRAMP1Q96RY5 1269 aa17.02■□□□□ 0.32
DNMT3A-213ENST00000484184 NYXQ9GZU5 481 aa17.02■□□□□ 0.32
DNMT3A-213ENST00000484184 MIS18AQ9NYP9 233 aa17.02■□□□□ 0.32
DNMT3A-213ENST00000484184 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.31
DNMT3A-213ENST00000484184 MAP3K15Q6ZN16 1313 aa17.01■□□□□ 0.31
DNMT3A-213ENST00000484184 CCDC85CA6NKD9 419 aa17.01■□□□□ 0.31
DNMT3A-213ENST00000484184 AOC2O75106 756 aa17.01■□□□□ 0.31
DNMT3A-213ENST00000484184 GRIPAP1Q4V328 841 aa17.01■□□□□ 0.31
DNMT3A-213ENST00000484184 SUSD4Q5VX71 490 aa17.01■□□□□ 0.31
DNMT3A-213ENST00000484184 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
DNMT3A-213ENST00000484184 TSKSQ9UJT2 592 aa17.01■□□□□ 0.31
DNMT3A-213ENST00000484184 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
DNMT3A-213ENST00000484184 MAP2K2P36507 400 aa17■□□□□ 0.31
DNMT3A-213ENST00000484184 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
DNMT3A-213ENST00000484184 MLLT1Q03111 559 aaPredicted RBP17■□□□□ 0.31
DNMT3A-213ENST00000484184 GRM1Q13255 1194 aa17■□□□□ 0.31
DNMT3A-213ENST00000484184 PAXIP1Q6ZW49 1069 aaPredicted RBP17■□□□□ 0.31
DNMT3A-213ENST00000484184 SAPCD2Q86UD0 394 aa17■□□□□ 0.31
DNMT3A-213ENST00000484184 NGEFQ8N5V2 710 aa17■□□□□ 0.31
DNMT3A-213ENST00000484184 CASP8AP2Q9UKL3 1982 aa17■□□□□ 0.31
DNMT3A-213ENST00000484184 NTSR2O95665 410 aa16.99■□□□□ 0.31
DNMT3A-213ENST00000484184 GPTP24298 496 aa16.99■□□□□ 0.31
DNMT3A-213ENST00000484184 ZNF34Q8IZ26 560 aa16.99■□□□□ 0.31
DNMT3A-213ENST00000484184 RPGRQ92834 1020 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-213ENST00000484184 CFAP53Q96M91 514 aa16.99■□□□□ 0.31
DNMT3A-213ENST00000484184 GPRC5DQ9NZD1 345 aa16.99■□□□□ 0.31
DNMT3A-213ENST00000484184 NUDCQ9Y266 331 aa16.99■□□□□ 0.31
DNMT3A-213ENST00000484184 KDM3BQ7LBC6 1761 aa16.99■□□□□ 0.31
DNMT3A-213ENST00000484184 PPEF1O14829 653 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-213ENST00000484184 NIM1KQ8IY84 436 aa16.98■□□□□ 0.31
DNMT3A-213ENST00000484184 BEGAINQ9BUH8 593 aa16.98■□□□□ 0.31
DNMT3A-213ENST00000484184 ADARB2Q9NS39 739 aaKnown RBP16.98■□□□□ 0.31
DNMT3A-213ENST00000484184 PGAP2Q9UHJ9 254 aa16.98■□□□□ 0.31
DNMT3A-213ENST00000484184 TCERG1O14776 1098 aaKnown RBP16.97■□□□□ 0.31
DNMT3A-213ENST00000484184 PPIP5K2O43314 1243 aa16.97■□□□□ 0.31
DNMT3A-213ENST00000484184 CXCL9Q07325 125 aa16.97■□□□□ 0.31
DNMT3A-213ENST00000484184 AOC3Q16853 763 aa16.97■□□□□ 0.31
DNMT3A-213ENST00000484184 RBM17Q96I25 401 aaKnown RBP16.97■□□□□ 0.31
DNMT3A-213ENST00000484184 TNRC18O15417 2968 aaPredicted RBP16.97■□□□□ 0.31
DNMT3A-213ENST00000484184 PPP2R1AP30153 589 aa16.96■□□□□ 0.31
DNMT3A-213ENST00000484184 EIF4A1P60842 406 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-213ENST00000484184 HHIPL1Q96JK4 782 aa16.96■□□□□ 0.31
DNMT3A-213ENST00000484184 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.31
DNMT3A-213ENST00000484184 GLIS2Q9BZE0 524 aaPredicted RBP16.96■□□□□ 0.31
DNMT3A-213ENST00000484184 MCOLN1Q9GZU1 580 aa16.96■□□□□ 0.31
DNMT3A-213ENST00000484184 VPS33BQ9H267 617 aa16.96■□□□□ 0.31
DNMT3A-213ENST00000484184 ZBTB3Q9H5J0 574 aa16.96■□□□□ 0.31
DNMT3A-213ENST00000484184 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-213ENST00000484184 ATP6V0A2Q9Y487 856 aa16.96■□□□□ 0.31
DNMT3A-213ENST00000484184 DLG5Q8TDM6 1919 aa16.96■□□□□ 0.3
DNMT3A-213ENST00000484184 CELF2O95319 508 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-213ENST00000484184 HIRAP54198 1017 aaPredicted RBP16.95■□□□□ 0.3
DNMT3A-213ENST00000484184 GIGYF2Q6Y7W6 1299 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-213ENST00000484184 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
DNMT3A-213ENST00000484184 ZNRF3Q9ULT6 936 aa16.95■□□□□ 0.3
DNMT3A-213ENST00000484184 MYL6BP14649 208 aa16.94■□□□□ 0.3
DNMT3A-213ENST00000484184 GMPSP49915 693 aaPredicted RBP16.94■□□□□ 0.3
DNMT3A-213ENST00000484184 SLC10A5Q5PT55 438 aa16.94■□□□□ 0.3
DNMT3A-213ENST00000484184 KIF6Q6ZMV9 814 aa16.94■□□□□ 0.3
DNMT3A-213ENST00000484184 CA12O43570 354 aa16.93■□□□□ 0.3
DNMT3A-213ENST00000484184 BRPF1P55201 1214 aaPredicted RBP16.93■□□□□ 0.3
DNMT3A-213ENST00000484184 ZIC5Q96T25 663 aa16.93■□□□□ 0.3
DNMT3A-213ENST00000484184 TRPM4Q8TD43 1214 aa16.92■□□□□ 0.3
DNMT3A-213ENST00000484184 PNISRQ8TF01 805 aaKnown RBP16.92■□□□□ 0.3
DNMT3A-213ENST00000484184 ZC3H15Q8WU90 426 aaKnown RBP16.92■□□□□ 0.3
DNMT3A-213ENST00000484184 ABCC4O15439 1325 aa16.92■□□□□ 0.3
DNMT3A-213ENST00000484184 CDHR2Q9BYE9 1310 aa16.92■□□□□ 0.3
DNMT3A-213ENST00000484184 PDIA6Q15084 440 aa16.91■□□□□ 0.3
DNMT3A-213ENST00000484184 PARP10Q53GL7 1025 aa16.91■□□□□ 0.3
DNMT3A-213ENST00000484184 CIAPIN1Q6FI81 312 aa16.91■□□□□ 0.3
DNMT3A-213ENST00000484184 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
DNMT3A-213ENST00000484184 THUMPD2Q9BTF0 503 aaKnown RBP16.91■□□□□ 0.3
DNMT3A-213ENST00000484184 SHTN1A0MZ66 631 aa16.9■□□□□ 0.3
DNMT3A-213ENST00000484184 KIAA2012Q0VF49 1180 aa16.9■□□□□ 0.3
DNMT3A-213ENST00000484184 PPP1R42Q7Z4L9 355 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms