RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 C20orf194Q5TEA3 1177 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 ERICH6BQ5W0A0 696 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 CLEC4GQ6UXB4 293 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 MYD88Q99836 296 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 TBC1D2BQ9UPU7 963 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 TNNQ9UQP3 1299 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 COG6Q9Y2V7 657 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 TUBGCP6Q96RT7 1819 aa11.38□□□□□ -0.59
SHROOM4-204ENST00000483955 C19orf67A6NJJ6 358 aa11.38□□□□□ -0.59
SHROOM4-204ENST00000483955 TCIRG1Q13488 830 aa11.38□□□□□ -0.59
SHROOM4-204ENST00000483955 BEND3Q5T5X7 828 aa11.38□□□□□ -0.59
SHROOM4-204ENST00000483955 ARHGEF1Q92888 912 aaKnown RBP11.38□□□□□ -0.59
SHROOM4-204ENST00000483955 CRBNQ96SW2 442 aa11.38□□□□□ -0.59
SHROOM4-204ENST00000483955 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
SHROOM4-204ENST00000483955 IRX6P78412 446 aaPredicted RBP11.37□□□□□ -0.59
SHROOM4-204ENST00000483955 ILDR2Q71H61 639 aa11.37□□□□□ -0.59
SHROOM4-204ENST00000483955 CCDC191Q8NCU4 936 aa11.37□□□□□ -0.59
SHROOM4-204ENST00000483955 HDAC5Q9UQL6 1122 aa11.37□□□□□ -0.59
SHROOM4-204ENST00000483955 NUP98P52948 1817 aa11.37□□□□□ -0.59
SHROOM4-204ENST00000483955 AFDNP55196 1824 aaKnown RBP11.37□□□□□ -0.59
SHROOM4-204ENST00000483955 PNPLA7Q6ZV29 1317 aa11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 NEURL1BA8MQ27 555 aa11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 GABBR2O75899 941 aa11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 GNAI3P08754 354 aa11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 HLFQ16534 295 aa11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 PARP10Q53GL7 1025 aa11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 USPL1Q5W0Q7 1092 aa11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 AMIGO3Q86WK7 504 aa11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 ISCA1Q9BUE6 129 aa11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 ANO8Q9HCE9 1232 aaPredicted RBP11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 CWC25Q9NXE8 425 aaPredicted RBP11.36□□□□□ -0.59
SHROOM4-204ENST00000483955 IGKV5-2P06315 115 aa11.35□□□□□ -0.59
SHROOM4-204ENST00000483955 CWF19L2Q2TBE0 894 aaKnown RBP11.35□□□□□ -0.59
SHROOM4-204ENST00000483955 COL24A1Q17RW2 1714 aa11.35□□□□□ -0.59
SHROOM4-204ENST00000483955 ATP5J2-PTCD1G3V325 749 aa11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 GRM8O00222 908 aa11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 UBTFL1P0CB47 393 aaPredicted RBP11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 GCKRQ14397 625 aa11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 PPP1R42Q7Z4L9 355 aa11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 ZNF34Q8IZ26 560 aa11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 EXOC6Q8TAG9 804 aa11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 C9orf78Q9NZ63 289 aaPredicted RBP11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 SRP68Q9UHB9 627 aaKnown RBP11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 NIP7Q9Y221 180 aaKnown RBP eCLIP11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 UTYO14607 1347 aa11.34□□□□□ -0.59
SHROOM4-204ENST00000483955 CARMIL3Q8ND23 1372 aa11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 ZBTB7BO15156 539 aaPredicted RBP11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 GYS1P13807 737 aa11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 GPTP24298 496 aa11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 TMEM132AQ24JP5 1023 aa11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 NLRP10Q86W26 655 aa11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 COL23A1Q86Y22 540 aaPredicted RBP11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 SETDB2Q96T68 719 aa11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 MEIS3Q99687 375 aa11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 UBN2Q6ZU65 1347 aa11.33□□□□□ -0.6
SHROOM4-204ENST00000483955 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
SHROOM4-204ENST00000483955 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
SHROOM4-204ENST00000483955 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
SHROOM4-204ENST00000483955 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
SHROOM4-204ENST00000483955 TBC1D9BQ66K14 1250 aa11.32□□□□□ -0.6
SHROOM4-204ENST00000483955 SMIM5Q71RC9 77 aa11.32□□□□□ -0.6
SHROOM4-204ENST00000483955 NLGN1Q8N2Q7 840 aa11.32□□□□□ -0.6
SHROOM4-204ENST00000483955 ZBTB38Q8NAP3 1195 aaPredicted RBP11.32□□□□□ -0.6
SHROOM4-204ENST00000483955 SLC16A10Q8TF71 515 aa11.32□□□□□ -0.6
SHROOM4-204ENST00000483955 USP44Q9H0E7 712 aa11.32□□□□□ -0.6
SHROOM4-204ENST00000483955 GNAI2P04899 355 aa11.31□□□□□ -0.6
SHROOM4-204ENST00000483955 PCCAP05165 728 aaPredicted RBP11.31□□□□□ -0.6
SHROOM4-204ENST00000483955 UTP14AQ9BVJ6 771 aaKnown RBP11.31□□□□□ -0.6
SHROOM4-204ENST00000483955 TRMT112Q9UI30 125 aaKnown RBP11.31□□□□□ -0.6
SHROOM4-204ENST00000483955 SH3TC1Q8TE82 1336 aa11.31□□□□□ -0.6
SHROOM4-204ENST00000483955 CDHR2Q9BYE9 1310 aa11.31□□□□□ -0.6
SHROOM4-204ENST00000483955 NBPF7P0C2Y1 421 aaPredicted RBP11.3□□□□□ -0.6
SHROOM4-204ENST00000483955 NFIXQ14938 502 aa11.3□□□□□ -0.6
SHROOM4-204ENST00000483955 UBE3BQ7Z3V4 1068 aa11.3□□□□□ -0.6
SHROOM4-204ENST00000483955 LAMB2P55268 1798 aa11.3□□□□□ -0.6
SHROOM4-204ENST00000483955 CASZ1Q86V15 1759 aa11.29□□□□□ -0.6
SHROOM4-204ENST00000483955 RIC1Q4ADV7 1423 aa11.29□□□□□ -0.6
SHROOM4-204ENST00000483955 H7C1W4 665 aa11.29□□□□□ -0.6
SHROOM4-204ENST00000483955 NPHP1O15259 732 aa11.29□□□□□ -0.6
SHROOM4-204ENST00000483955 NTSR2O95665 410 aa11.29□□□□□ -0.6
SHROOM4-204ENST00000483955 SUSD4Q5VX71 490 aa11.29□□□□□ -0.6
SHROOM4-204ENST00000483955 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
SHROOM4-204ENST00000483955 BICDL1Q6ZP65 573 aa11.29□□□□□ -0.6
SHROOM4-204ENST00000483955 NBPF5PQ86XG9 351 aaPredicted RBP11.29□□□□□ -0.6
SHROOM4-204ENST00000483955 GTF2E1P29083 439 aaPredicted RBP11.28□□□□□ -0.6
SHROOM4-204ENST00000483955 TM4SF1P30408 202 aa11.28□□□□□ -0.6
SHROOM4-204ENST00000483955 CASP7P55210 303 aa11.28□□□□□ -0.6
SHROOM4-204ENST00000483955 RPAP2Q8IXW5 612 aaPredicted RBP11.28□□□□□ -0.6
SHROOM4-204ENST00000483955 CNBD1Q8NA66 436 aa11.28□□□□□ -0.6
SHROOM4-204ENST00000483955 PLA2G12BQ9BX93 195 aa11.28□□□□□ -0.6
SHROOM4-204ENST00000483955 PPP4R2Q9NY27 417 aa11.28□□□□□ -0.6
SHROOM4-204ENST00000483955 LRRFIP2Q9Y608 721 aaKnown RBP11.28□□□□□ -0.6
SHROOM4-204ENST00000483955 POLRMTO00411 1230 aaKnown RBP11.27□□□□□ -0.61
SHROOM4-204ENST00000483955 IRS4O14654 1257 aaPredicted RBP11.27□□□□□ -0.61
SHROOM4-204ENST00000483955 PDE8AO60658 829 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms