RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 CALD1Q05682 793 aaKnown RBP25.87■■□□□ 1.73
HPS4-213ENST00000483631 GRIPAP1Q4V328 841 aa25.87■■□□□ 1.73
HPS4-213ENST00000483631 COPS6Q7L5N1 327 aa25.86■■□□□ 1.73
HPS4-213ENST00000483631 LAS1LQ9Y4W2 734 aaKnown RBP25.86■■□□□ 1.73
HPS4-213ENST00000483631 SLC10A5Q5PT55 438 aa25.85■■□□□ 1.73
HPS4-213ENST00000483631 RPGRQ92834 1020 aaKnown RBP25.85■■□□□ 1.73
HPS4-213ENST00000483631 CRAMP1Q96RY5 1269 aa25.85■■□□□ 1.73
HPS4-213ENST00000483631 ANXA1P04083 346 aa25.84■■□□□ 1.73
HPS4-213ENST00000483631 ZNF853P0CG23 659 aa25.84■■□□□ 1.73
HPS4-213ENST00000483631 SNED1Q8TER0 1413 aa25.84■■□□□ 1.73
HPS4-213ENST00000483631 XAGE3Q8WTP9 111 aa25.84■■□□□ 1.73
HPS4-213ENST00000483631 UTP14AQ9BVJ6 771 aaKnown RBP25.84■■□□□ 1.73
HPS4-213ENST00000483631 APAF1O14727 1248 aa25.83■■□□□ 1.73
HPS4-213ENST00000483631 KRT24Q2M2I5 525 aa25.83■■□□□ 1.73
HPS4-213ENST00000483631 HDGFL1Q5TGJ6 251 aa25.83■■□□□ 1.73
HPS4-213ENST00000483631 RBM17Q96I25 401 aaKnown RBP25.83■■□□□ 1.73
HPS4-213ENST00000483631 PSMD1Q99460 953 aa25.83■■□□□ 1.73
HPS4-213ENST00000483631 IFT57Q9NWB7 429 aa25.83■■□□□ 1.73
HPS4-213ENST00000483631 DBF4Q9UBU7 674 aaPredicted RBP25.83■■□□□ 1.73
HPS4-213ENST00000483631 POTECB2RU33 542 aa25.82■■□□□ 1.72
HPS4-213ENST00000483631 NLRP3Q96P20 1036 aa25.82■■□□□ 1.72
HPS4-213ENST00000483631 SCN4AP35499 1836 aa25.81■■□□□ 1.72
HPS4-213ENST00000483631 GNAI1P63096 354 aa25.81■■□□□ 1.72
HPS4-213ENST00000483631 TCIRG1Q13488 830 aa25.81■■□□□ 1.72
HPS4-213ENST00000483631 NECTIN2Q92692 538 aa25.81■■□□□ 1.72
HPS4-213ENST00000483631 MBIPQ9NS73 344 aa25.81■■□□□ 1.72
HPS4-213ENST00000483631 CHPF2Q9P2E5 772 aa25.81■■□□□ 1.72
HPS4-213ENST00000483631 AIMP1Q12904 312 aaKnown RBP25.8■■□□□ 1.72
HPS4-213ENST00000483631 NLRP10Q86W26 655 aa25.8■■□□□ 1.72
HPS4-213ENST00000483631 DUSP27Q5VZP5 1158 aa25.79■■□□□ 1.72
HPS4-213ENST00000483631 DNAJC5GQ8N7S2 189 aa25.79■■□□□ 1.72
HPS4-213ENST00000483631 L3MBTL3Q96JM7 780 aaPredicted RBP25.79■■□□□ 1.72
HPS4-213ENST00000483631 HYPKQ9NX55 129 aa25.79■■□□□ 1.72
HPS4-213ENST00000483631 IARSP41252 1262 aaKnown RBP25.78■■□□□ 1.72
HPS4-213ENST00000483631 OLFM4Q6UX06 510 aa25.78■■□□□ 1.72
HPS4-213ENST00000483631 SYNE4Q8N205 404 aa25.78■■□□□ 1.72
HPS4-213ENST00000483631 PLBD2Q8NHP8 589 aa25.78■■□□□ 1.72
HPS4-213ENST00000483631 ZNF277Q9NRM2 450 aaPredicted RBP25.78■■□□□ 1.72
HPS4-213ENST00000483631 IQCA1LA6NCM1 817 aa25.77■■□□□ 1.72
HPS4-213ENST00000483631 DDNO94850 711 aaPredicted RBP25.77■■□□□ 1.72
HPS4-213ENST00000483631 CHMP4AQ9BY43 222 aa25.77■■□□□ 1.72
HPS4-213ENST00000483631 LAMB2P55268 1798 aa25.77■■□□□ 1.72
HPS4-213ENST00000483631 ANKRD13DQ6ZTN6 518 aa25.76■■□□□ 1.71
HPS4-213ENST00000483631 SH3TC1Q8TE82 1336 aa25.75■■□□□ 1.71
HPS4-213ENST00000483631 FZD9O00144 591 aa25.75■■□□□ 1.71
HPS4-213ENST00000483631 PPEF1O14829 653 aaPredicted RBP25.75■■□□□ 1.71
HPS4-213ENST00000483631 NCBP3Q53F19 620 aaKnown RBP25.74■■□□□ 1.71
HPS4-213ENST00000483631 C3orf67Q6ZVT6 689 aa25.74■■□□□ 1.71
HPS4-213ENST00000483631 TRMT112Q9UI30 125 aaKnown RBP25.74■■□□□ 1.71
HPS4-213ENST00000483631 CCDC27Q2M243 656 aa25.73■■□□□ 1.71
HPS4-213ENST00000483631 JDP2Q8WYK2 163 aa25.73■■□□□ 1.71
HPS4-213ENST00000483631 ISCA1Q9BUE6 129 aa25.73■■□□□ 1.71
HPS4-213ENST00000483631 TMX4Q9H1E5 349 aaPredicted RBP25.73■■□□□ 1.71
HPS4-213ENST00000483631 VPS33BQ9H267 617 aa25.73■■□□□ 1.71
HPS4-213ENST00000483631 BBOX1O75936 387 aa25.72■■□□□ 1.71
HPS4-213ENST00000483631 TRIM28Q13263 835 aaKnown RBP25.72■■□□□ 1.71
HPS4-213ENST00000483631 ATP6V0A2Q9Y487 856 aa25.72■■□□□ 1.71
HPS4-213ENST00000483631 ABCC4O15439 1325 aa25.7■■□□□ 1.71
HPS4-213ENST00000483631 ZNF541Q9H0D2 1346 aa25.7■■□□□ 1.71
HPS4-213ENST00000483631 CHADLQ6NUI6 762 aa25.7■■□□□ 1.7
HPS4-213ENST00000483631 KLRG1Q96E93 195 aa25.7■■□□□ 1.7
HPS4-213ENST00000483631 DDX60Q8IY21 1712 aaKnown RBP25.69■■□□□ 1.7
HPS4-213ENST00000483631 ZNF316A6NFI3 1004 aaPredicted RBP25.69■■□□□ 1.7
HPS4-213ENST00000483631 GPC2Q8N158 579 aa25.69■■□□□ 1.7
HPS4-213ENST00000483631 HCLS1P14317 486 aaPredicted RBP25.68■■□□□ 1.7
HPS4-213ENST00000483631 DDX46Q7L014 1031 aaKnown RBP25.68■■□□□ 1.7
HPS4-213ENST00000483631 TMC4Q7Z404 712 aa25.68■■□□□ 1.7
HPS4-213ENST00000483631 TAF1DQ9H5J8 278 aaPredicted RBP25.68■■□□□ 1.7
HPS4-213ENST00000483631 CCDC184Q52MB2 194 aa25.67■■□□□ 1.7
HPS4-213ENST00000483631 LDHDQ86WU2 507 aa25.67■■□□□ 1.7
HPS4-213ENST00000483631 SP8Q8IXZ3 490 aa25.67■■□□□ 1.7
HPS4-213ENST00000483631 SUPT20HQ8NEM7 779 aa25.67■■□□□ 1.7
HPS4-213ENST00000483631 RTFDC1Q9BY42 306 aaPredicted RBP25.67■■□□□ 1.7
HPS4-213ENST00000483631 EIF6P56537 245 aaKnown RBP25.66■■□□□ 1.7
HPS4-213ENST00000483631 GOLGA2Q08379 1002 aa25.66■■□□□ 1.7
HPS4-213ENST00000483631 JMYQ8N9B5 988 aa25.66■■□□□ 1.7
HPS4-213ENST00000483631 HACL1Q9UJ83 578 aa25.66■■□□□ 1.7
HPS4-213ENST00000483631 ANP32CO43423 234 aa25.65■■□□□ 1.7
HPS4-213ENST00000483631 GRAPQ13588 217 aa25.65■■□□□ 1.7
HPS4-213ENST00000483631 CCDC30Q5VVM6 783 aa25.65■■□□□ 1.7
HPS4-213ENST00000483631 LARGE2Q8N3Y3 721 aa25.65■■□□□ 1.7
HPS4-213ENST00000483631 GRAPLQ8TC17 118 aaPredicted RBP25.65■■□□□ 1.7
HPS4-213ENST00000483631 COL4A5P29400 1685 aa25.64■■□□□ 1.7
HPS4-213ENST00000483631 SF3B3Q15393 1217 aaKnown RBP25.64■■□□□ 1.7
HPS4-213ENST00000483631 RIC3Q7Z5B4 369 aa25.64■■□□□ 1.7
HPS4-213ENST00000483631 PNMA8AQ86V59 439 aaPredicted RBP25.64■■□□□ 1.7
HPS4-213ENST00000483631 C8orf58Q8NAV2 365 aa25.64■■□□□ 1.7
HPS4-213ENST00000483631 ADAMTSL1Q8N6G6 1762 aa25.64■■□□□ 1.69
HPS4-213ENST00000483631 IL16Q14005 1332 aa25.63■■□□□ 1.69
HPS4-213ENST00000483631 LRRC37AA6NMS7 1700 aa25.63■■□□□ 1.69
HPS4-213ENST00000483631 HSP90B1P14625 803 aaKnown RBP25.63■■□□□ 1.69
HPS4-213ENST00000483631 HTRA3P83110 453 aa25.63■■□□□ 1.69
HPS4-213ENST00000483631 ATP5J2-PTCD1G3V325 749 aa25.62■■□□□ 1.69
HPS4-213ENST00000483631 ELL2O00472 640 aaPredicted RBP25.62■■□□□ 1.69
HPS4-213ENST00000483631 TCERG1O14776 1098 aaKnown RBP25.62■■□□□ 1.69
HPS4-213ENST00000483631 EPHX2P34913 555 aa25.62■■□□□ 1.69
HPS4-213ENST00000483631 WWC1Q8IX03 1113 aa25.62■■□□□ 1.69
HPS4-213ENST00000483631 NIM1KQ8IY84 436 aa25.62■■□□□ 1.69
HPS4-213ENST00000483631 MRS2Q9HD23 443 aa25.62■■□□□ 1.69
HPS4-213ENST00000483631 PPIP5K2O43314 1243 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms