RNA–Protein interactions for RNA: ENST00000483579.1

CAPN2-208, Transcript of calpain 2, human

TSL 2

Gene CAPN2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN2-208	ENST00000483579	RIC1	Q4ADV7	1423 aa		27.9	■■■□□ 2.06
CAPN2-208	ENST00000483579	LAMB2	P55268	1798 aa		27.89	■■■□□ 2.06
CAPN2-208	ENST00000483579	ALDH1B1	P30837	517 aa		27.89	■■■□□ 2.06
CAPN2-208	ENST00000483579	TCIRG1	Q13488	830 aa		27.89	■■■□□ 2.06
CAPN2-208	ENST00000483579	PLBD2	Q8NHP8	589 aa		27.89	■■■□□ 2.06
CAPN2-208	ENST00000483579	CRY2	Q49AN0	593 aa		27.88	■■■□□ 2.05
CAPN2-208	ENST00000483579	ANKRD13D	Q6ZTN6	518 aa		27.88	■■■□□ 2.05
CAPN2-208	ENST00000483579	NLRP10	Q86W26	655 aa		27.88	■■■□□ 2.05
CAPN2-208	ENST00000483579	RPGR	Q92834	1020 aa	Known RBP	27.88	■■■□□ 2.05
CAPN2-208	ENST00000483579	TAOK3	Q9H2K8	898 aa		27.88	■■■□□ 2.05
CAPN2-208	ENST00000483579	KIF3C	O14782	793 aa		27.87	■■■□□ 2.05
CAPN2-208	ENST00000483579	NMRK2	Q9NPI5	230 aa		27.87	■■■□□ 2.05
CAPN2-208	ENST00000483579	CCDC93	Q567U6	631 aa		27.86	■■■□□ 2.05
CAPN2-208	ENST00000483579	TSPYL6	Q8N831	410 aa		27.86	■■■□□ 2.05
CAPN2-208	ENST00000483579	C7orf43	Q8WVR3	580 aa		27.86	■■■□□ 2.05
CAPN2-208	ENST00000483579	KDM2B	Q8NHM5	1336 aa		27.86	■■■□□ 2.05
CAPN2-208	ENST00000483579	ZC3H4	Q9UPT8	1303 aa	Known RBP	27.86	■■■□□ 2.05
CAPN2-208	ENST00000483579	NCBP3	Q53F19	620 aa	Known RBP	27.85	■■■□□ 2.05
CAPN2-208	ENST00000483579	ZNF428	Q96B54	188 aa		27.85	■■■□□ 2.05
CAPN2-208	ENST00000483579	TRMT112	Q9UI30	125 aa	Known RBP	27.85	■■■□□ 2.05
CAPN2-208	ENST00000483579	LTBP3	Q9NS15	1303 aa		27.85	■■■□□ 2.05
CAPN2-208	ENST00000483579	OLFM4	Q6UX06	510 aa		27.84	■■■□□ 2.05
CAPN2-208	ENST00000483579	C3orf67	Q6ZVT6	689 aa		27.84	■■■□□ 2.05
CAPN2-208	ENST00000483579	NLRP3	Q96P20	1036 aa		27.84	■■■□□ 2.05
CAPN2-208	ENST00000483579	PHAX	Q9H814	394 aa	Known RBP	27.84	■■■□□ 2.05
CAPN2-208	ENST00000483579	IL16	Q14005	1332 aa		27.84	■■■□□ 2.05
CAPN2-208	ENST00000483579	RNF123	Q5XPI4	1314 aa		27.84	■■■□□ 2.05
CAPN2-208	ENST00000483579	CCDC30	Q5VVM6	783 aa		27.83	■■■□□ 2.05
CAPN2-208	ENST00000483579	RBM17	Q96I25	401 aa	Known RBP	27.83	■■■□□ 2.05
CAPN2-208	ENST00000483579	CHMP4A	Q9BY43	222 aa		27.83	■■■□□ 2.05
CAPN2-208	ENST00000483579	GOLGA2	Q08379	1002 aa		27.82	■■■□□ 2.04
CAPN2-208	ENST00000483579	RIC3	Q7Z5B4	369 aa		27.82	■■■□□ 2.04
CAPN2-208	ENST00000483579	ATP5J2-PTCD1	G3V325	749 aa		27.81	■■■□□ 2.04
CAPN2-208	ENST00000483579	HOXA10	P31260	410 aa	Predicted RBP	27.81	■■■□□ 2.04
CAPN2-208	ENST00000483579	SLC10A5	Q5PT55	438 aa		27.81	■■■□□ 2.04
CAPN2-208	ENST00000483579	SYNE4	Q8N205	404 aa		27.81	■■■□□ 2.04
CAPN2-208	ENST00000483579	DDX60	Q8IY21	1712 aa	Known RBP	27.81	■■■□□ 2.04
CAPN2-208	ENST00000483579	HCLS1	P14317	486 aa	Predicted RBP	27.8	■■■□□ 2.04
CAPN2-208	ENST00000483579	SH3TC1	Q8TE82	1336 aa		27.8	■■■□□ 2.04
CAPN2-208	ENST00000483579	TAF1	P21675	1872 aa		27.8	■■■□□ 2.04
CAPN2-208	ENST00000483579	CACNA1F	O60840	1977 aa		27.8	■■■□□ 2.04
CAPN2-208	ENST00000483579	TWISTNB	Q3B726	338 aa	Predicted RBP	27.79	■■■□□ 2.04
CAPN2-208	ENST00000483579	WDR63	Q8IWG1	891 aa		27.79	■■■□□ 2.04
CAPN2-208	ENST00000483579	RTKN2	Q8IZC4	609 aa		27.79	■■■□□ 2.04
CAPN2-208	ENST00000483579	ISCA1	Q9BUE6	129 aa		27.79	■■■□□ 2.04
CAPN2-208	ENST00000483579	RRAGC	Q9HB90	399 aa		27.79	■■■□□ 2.04
CAPN2-208	ENST00000483579	GLTPD2	A6NH11	291 aa		27.78	■■■□□ 2.04
CAPN2-208	ENST00000483579	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.78	■■■□□ 2.04
CAPN2-208	ENST00000483579	CRAMP1	Q96RY5	1269 aa		27.78	■■■□□ 2.04
CAPN2-208	ENST00000483579	FANCI	Q9NVI1	1328 aa		27.77	■■■□□ 2.04
CAPN2-208	ENST00000483579	TCERG1	O14776	1098 aa	Known RBP	27.77	■■■□□ 2.04
CAPN2-208	ENST00000483579	STK31	Q9BXU1	1019 aa		27.77	■■■□□ 2.04
CAPN2-208	ENST00000483579	C16orf71	Q8IYS4	520 aa	Predicted RBP	27.76	■■■□□ 2.03
CAPN2-208	ENST00000483579	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.76	■■■□□ 2.03
CAPN2-208	ENST00000483579	PPEF1	O14829	653 aa	Predicted RBP	27.75	■■■□□ 2.03
CAPN2-208	ENST00000483579	TOMM70	O94826	608 aa		27.75	■■■□□ 2.03
CAPN2-208	ENST00000483579	FAM89A	Q96GI7	184 aa		27.75	■■■□□ 2.03
CAPN2-208	ENST00000483579	CEP350	Q5VT06	3117 aa		27.75	■■■□□ 2.03
CAPN2-208	ENST00000483579	DDX58	O95786	925 aa	Known RBP	27.74	■■■□□ 2.03
CAPN2-208	ENST00000483579	RTL5	Q5HYW3	569 aa	Predicted RBP	27.74	■■■□□ 2.03
CAPN2-208	ENST00000483579	DPY19L2	Q6NUT2	758 aa		27.74	■■■□□ 2.03
CAPN2-208	ENST00000483579	MYD88	Q99836	296 aa		27.74	■■■□□ 2.03
CAPN2-208	ENST00000483579	ABCC4	O15439	1325 aa		27.73	■■■□□ 2.03
CAPN2-208	ENST00000483579	CC2D2B	Q6DHV5	1058 aa		27.73	■■■□□ 2.03
CAPN2-208	ENST00000483579	TRIM28	Q13263	835 aa	Known RBP	27.72	■■■□□ 2.03
CAPN2-208	ENST00000483579	DDX46	Q7L014	1031 aa	Known RBP	27.71	■■■□□ 2.03
CAPN2-208	ENST00000483579	SLC51A	Q86UW1	340 aa		27.71	■■■□□ 2.03
CAPN2-208	ENST00000483579	SNED1	Q8TER0	1413 aa		27.71	■■■□□ 2.03
CAPN2-208	ENST00000483579	WDR90	Q96KV7	1748 aa		27.71	■■■□□ 2.03
CAPN2-208	ENST00000483579	PSMD1	Q99460	953 aa		27.7	■■■□□ 2.02
CAPN2-208	ENST00000483579	TMX4	Q9H1E5	349 aa	Predicted RBP	27.7	■■■□□ 2.02
CAPN2-208	ENST00000483579	SLC4A2	P04920	1241 aa		27.69	■■■□□ 2.02
CAPN2-208	ENST00000483579	IARS	P41252	1262 aa	Known RBP	27.69	■■■□□ 2.02
CAPN2-208	ENST00000483579	EXOSC9	Q06265	439 aa	Known RBP	27.69	■■■□□ 2.02
CAPN2-208	ENST00000483579	METTL22	Q9BUU2	404 aa	Predicted RBP	27.69	■■■□□ 2.02
CAPN2-208	ENST00000483579	SPINK5	Q9NQ38	1064 aa	Predicted RBP	27.69	■■■□□ 2.02
CAPN2-208	ENST00000483579	MAP3K2	Q9Y2U5	619 aa		27.69	■■■□□ 2.02
CAPN2-208	ENST00000483579	VEGFA	P15692	232 aa	Predicted RBP	27.68	■■■□□ 2.02
CAPN2-208	ENST00000483579	PI4KAP2	A4QPH2	592 aa		27.67	■■■□□ 2.02
CAPN2-208	ENST00000483579	IRS4	O14654	1257 aa	Predicted RBP	27.67	■■■□□ 2.02
CAPN2-208	ENST00000483579	GRIPAP1	Q4V328	841 aa		27.67	■■■□□ 2.02
CAPN2-208	ENST00000483579	KSR2	Q6VAB6	950 aa		27.67	■■■□□ 2.02
CAPN2-208	ENST00000483579	G2E3	Q7L622	706 aa		27.67	■■■□□ 2.02
CAPN2-208	ENST00000483579	PI4KAP1	Q8N8J0	262 aa		27.67	■■■□□ 2.02
CAPN2-208	ENST00000483579	RBM46	Q8TBY0	533 aa	Known RBP	27.67	■■■□□ 2.02
CAPN2-208	ENST00000483579	MYH16	Q9H6N6	1097 aa		27.67	■■■□□ 2.02
CAPN2-208	ENST00000483579	ATP6V0A2	Q9Y487	856 aa		27.67	■■■□□ 2.02
CAPN2-208	ENST00000483579	BBOX1	O75936	387 aa		27.66	■■■□□ 2.02
CAPN2-208	ENST00000483579	DDN	O94850	711 aa	Predicted RBP	27.66	■■■□□ 2.02
CAPN2-208	ENST00000483579	HSPA6	P17066	643 aa		27.66	■■■□□ 2.02
CAPN2-208	ENST00000483579	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.66	■■■□□ 2.02
CAPN2-208	ENST00000483579	CCDC191	Q8NCU4	936 aa		27.66	■■■□□ 2.02
CAPN2-208	ENST00000483579	CWC25	Q9NXE8	425 aa	Predicted RBP	27.66	■■■□□ 2.02
CAPN2-208	ENST00000483579	GRAP	Q13588	217 aa		27.65	■■■□□ 2.02
CAPN2-208	ENST00000483579	GRAPL	Q8TC17	118 aa	Predicted RBP	27.65	■■■□□ 2.02
CAPN2-208	ENST00000483579	VAMP4	O75379	141 aa		27.64	■■■□□ 2.02
CAPN2-208	ENST00000483579	MYH3	P11055	1940 aa		27.64	■■■□□ 2.02
CAPN2-208	ENST00000483579	JDP2	Q8WYK2	163 aa		27.63	■■■□□ 2.01
CAPN2-208	ENST00000483579	SCN4A	P35499	1836 aa		27.62	■■■□□ 2.01
CAPN2-208	ENST00000483579	PCCA	P05165	728 aa	Predicted RBP	27.62	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms