RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
APTX-226ENST00000483148 APAF1O14727 1248 aa12.4□□□□□ -0.42
APTX-226ENST00000483148 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.42
APTX-226ENST00000483148 MFAP1P55081 439 aaKnown RBP12.4□□□□□ -0.42
APTX-226ENST00000483148 AMOTQ4VCS5 1084 aa12.4□□□□□ -0.42
APTX-226ENST00000483148 PDLIM2Q96JY6 352 aa12.4□□□□□ -0.42
APTX-226ENST00000483148 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
APTX-226ENST00000483148 PCDHB15Q9Y5E8 787 aa12.4□□□□□ -0.42
APTX-226ENST00000483148 COL5A3P25940 1745 aaPredicted RBP12.4□□□□□ -0.42
APTX-226ENST00000483148 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
APTX-226ENST00000483148 KIF20AO95235 890 aa12.39□□□□□ -0.43
APTX-226ENST00000483148 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
APTX-226ENST00000483148 PLEKHO1Q53GL0 409 aaPredicted RBP12.39□□□□□ -0.43
APTX-226ENST00000483148 USP42Q9H9J4 1324 aaKnown RBP12.39□□□□□ -0.43
APTX-226ENST00000483148 ZNF831Q5JPB2 1677 aa12.38□□□□□ -0.43
APTX-226ENST00000483148 GLTPD2A6NH11 291 aa12.38□□□□□ -0.43
APTX-226ENST00000483148 POTECB2RU33 542 aa12.38□□□□□ -0.43
APTX-226ENST00000483148 VEGFAP15692 232 aaPredicted RBP12.38□□□□□ -0.43
APTX-226ENST00000483148 CABP4P57796 275 aa12.38□□□□□ -0.43
APTX-226ENST00000483148 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
APTX-226ENST00000483148 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
APTX-226ENST00000483148 ZKSCAN5Q9Y2L8 839 aa12.38□□□□□ -0.43
APTX-226ENST00000483148 KDM6AO15550 1401 aaPredicted RBP12.38□□□□□ -0.43
APTX-226ENST00000483148 MTHFSDQ2M296 383 aaKnown RBP12.38□□□□□ -0.43
APTX-226ENST00000483148 RUNDC1Q96C34 613 aa12.38□□□□□ -0.43
APTX-226ENST00000483148 CCDC39Q9UFE4 941 aa12.38□□□□□ -0.43
APTX-226ENST00000483148 TNRC6CQ9HCJ0 1690 aaKnown RBP12.37□□□□□ -0.43
APTX-226ENST00000483148 RARSP54136 660 aaKnown RBP12.37□□□□□ -0.43
APTX-226ENST00000483148 LETM1O95202 739 aaPredicted RBP12.36□□□□□ -0.43
APTX-226ENST00000483148 HDAC1Q13547 482 aaPredicted RBP12.36□□□□□ -0.43
APTX-226ENST00000483148 ZNF530Q6P9A1 599 aaPredicted RBP12.36□□□□□ -0.43
APTX-226ENST00000483148 CCDC146Q8IYE0 955 aa12.36□□□□□ -0.43
APTX-226ENST00000483148 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
APTX-226ENST00000483148 GAS2L2Q8NHY3 880 aa12.36□□□□□ -0.43
APTX-226ENST00000483148 LMNB1P20700 586 aa12.35□□□□□ -0.43
APTX-226ENST00000483148 TAF3Q5VWG9 929 aa12.35□□□□□ -0.43
APTX-226ENST00000483148 USPL1Q5W0Q7 1092 aa12.35□□□□□ -0.43
APTX-226ENST00000483148 PDE4CQ08493 712 aa12.35□□□□□ -0.43
APTX-226ENST00000483148 AKAP4Q5JQC9 854 aa12.35□□□□□ -0.43
APTX-226ENST00000483148 DDX49Q9Y6V7 483 aaKnown RBP12.35□□□□□ -0.43
APTX-226ENST00000483148 PCNTO95613 3336 aa12.34□□□□□ -0.43
APTX-226ENST00000483148 DLG5Q8TDM6 1919 aa12.34□□□□□ -0.43
APTX-226ENST00000483148 ADAMTS7Q9UKP4 1686 aa12.34□□□□□ -0.43
APTX-226ENST00000483148 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
APTX-226ENST00000483148 NFIXQ14938 502 aa12.34□□□□□ -0.43
APTX-226ENST00000483148 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
APTX-226ENST00000483148 WDR63Q8IWG1 891 aa12.34□□□□□ -0.43
APTX-226ENST00000483148 WWC1Q8IX03 1113 aa12.34□□□□□ -0.43
APTX-226ENST00000483148 DNAJC10Q8IXB1 793 aa12.34□□□□□ -0.43
APTX-226ENST00000483148 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
APTX-226ENST00000483148 KIF16BQ96L93 1317 aa12.34□□□□□ -0.43
APTX-226ENST00000483148 ZC3H4Q9UPT8 1303 aaKnown RBP12.34□□□□□ -0.43
APTX-226ENST00000483148 K7ELQ4 463 aaPredicted RBP12.33□□□□□ -0.44
APTX-226ENST00000483148 ZSCAN20P17040 1043 aaPredicted RBP12.33□□□□□ -0.44
APTX-226ENST00000483148 TMPOP42166 694 aaKnown RBP12.33□□□□□ -0.44
APTX-226ENST00000483148 NFKBIEO00221 500 aa12.33□□□□□ -0.44
APTX-226ENST00000483148 CT47B1P0C2W7 299 aaPredicted RBP12.33□□□□□ -0.44
APTX-226ENST00000483148 C1orf141Q5JVX7 400 aa12.33□□□□□ -0.44
APTX-226ENST00000483148 MYRIPQ8NFW9 859 aa12.33□□□□□ -0.44
APTX-226ENST00000483148 PRIMPOLQ96LW4 560 aa12.33□□□□□ -0.44
APTX-226ENST00000483148 BCL2L12Q9HB09 334 aa12.33□□□□□ -0.44
APTX-226ENST00000483148 GNAT3A8MTJ3 354 aa12.32□□□□□ -0.44
APTX-226ENST00000483148 ZPR1O75312 459 aa12.32□□□□□ -0.44
APTX-226ENST00000483148 BAG4O95429 457 aaKnown RBP12.32□□□□□ -0.44
APTX-226ENST00000483148 HMGN5P82970 282 aaKnown RBP12.32□□□□□ -0.44
APTX-226ENST00000483148 TTLL6Q8N841 843 aa12.32□□□□□ -0.44
APTX-226ENST00000483148 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
APTX-226ENST00000483148 CCDC88AQ3V6T2 1871 aa12.32□□□□□ -0.44
APTX-226ENST00000483148 SOS1Q07889 1333 aaPredicted RBP12.32□□□□□ -0.44
APTX-226ENST00000483148 SCN11AQ9UI33 1791 aa12.32□□□□□ -0.44
APTX-226ENST00000483148 TJP1Q07157 1748 aa12.31□□□□□ -0.44
APTX-226ENST00000483148 FOXN1O15353 648 aa12.31□□□□□ -0.44
APTX-226ENST00000483148 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
APTX-226ENST00000483148 SERPINB2P05120 415 aa12.31□□□□□ -0.44
APTX-226ENST00000483148 NUCB2P80303 420 aa12.31□□□□□ -0.44
APTX-226ENST00000483148 C2CD5Q86YS7 1000 aa12.31□□□□□ -0.44
APTX-226ENST00000483148 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
APTX-226ENST00000483148 AFDNP55196 1824 aaKnown RBP12.3□□□□□ -0.44
APTX-226ENST00000483148 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
APTX-226ENST00000483148 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
APTX-226ENST00000483148 CYP19A1P11511 503 aaPredicted RBP12.3□□□□□ -0.44
APTX-226ENST00000483148 GTF2F1P35269 517 aaKnown RBP eCLIP12.3□□□□□ -0.44
APTX-226ENST00000483148 CCDC27Q2M243 656 aa12.3□□□□□ -0.44
APTX-226ENST00000483148 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
APTX-226ENST00000483148 MRC1P22897 1456 aa12.3□□□□□ -0.44
APTX-226ENST00000483148 RLBP1P12271 317 aa12.3□□□□□ -0.44
APTX-226ENST00000483148 IL17REQ8NFR9 667 aa12.3□□□□□ -0.44
APTX-226ENST00000483148 NARFQ9UHQ1 456 aa12.3□□□□□ -0.44
APTX-226ENST00000483148 RRP7AQ9Y3A4 280 aaKnown RBP12.3□□□□□ -0.44
APTX-226ENST00000483148 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
APTX-226ENST00000483148 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
APTX-226ENST00000483148 ZSCAN23Q3MJ62 389 aa12.29□□□□□ -0.44
APTX-226ENST00000483148 PPP4R3BQ5MIZ7 849 aa12.29□□□□□ -0.44
APTX-226ENST00000483148 ZKSCAN2Q63HK3 967 aa12.29□□□□□ -0.44
APTX-226ENST00000483148 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
APTX-226ENST00000483148 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
APTX-226ENST00000483148 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
APTX-226ENST00000483148 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
APTX-226ENST00000483148 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
APTX-226ENST00000483148 CARMIL3Q8ND23 1372 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms