RNA–Protein interactions for RNA: ENST00000482967.5

CDK5RAP1-213, Transcript of CDK5 regulatory subunit associated protein 1, human

TSL 3

Gene CDK5RAP1, Length 840 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP1-213	ENST00000482967	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	GTF2E1	P29083	439 aa	Predicted RBP	11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	ALDH1B1	P30837	517 aa		11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	MAP2K1	Q02750	393 aa	Predicted RBP	11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	GRM1	Q13255	1194 aa		11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	C3orf67	Q6ZVT6	689 aa		11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	JDP2	Q8WYK2	163 aa		11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	CAPNS2	Q96L46	248 aa		11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	CFAP53	Q96M91	514 aa		11.47	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	RIC1	Q4ADV7	1423 aa		11.46	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	GPT	P24298	496 aa		11.46	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	EIF6	P56537	245 aa	Known RBP	11.46	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	CYP4F22	Q6NT55	531 aa		11.46	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	TTLL7	Q6ZT98	887 aa		11.46	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	TSKS	Q9UJT2	592 aa		11.46	□□□□□ -0.57
CDK5RAP1-213	ENST00000482967	MAP3K15	Q6ZN16	1313 aa		11.45	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	TCERG1	O14776	1098 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	SLC34A2	O95436	690 aa		11.45	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	LMOD1	P29536	600 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	CST9	Q5W186	159 aa		11.45	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	LARGE2	Q8N3Y3	721 aa		11.45	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	RPGR	Q92834	1020 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	NYX	Q9GZU5	481 aa		11.45	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	ZBTB3	Q9H5J0	574 aa		11.45	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	LAMB4	A4D0S4	1761 aa		11.45	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	PPEF1	O14829	653 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	PPP2R1A	P30153	589 aa		11.44	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	HOXA10	P31260	410 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	SUSD4	Q5VX71	490 aa		11.44	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	NUDC	Q9Y266	331 aa		11.44	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	ERVV-1	B6SEH8	477 aa		11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	AOC2	O75106	756 aa		11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	NTSR2	O95665	410 aa		11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	MYL6B	P14649	208 aa		11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	TAF7	Q15545	349 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	AOC3	Q16853	763 aa		11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	CC2D2B	Q6DHV5	1058 aa		11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	NIM1K	Q8IY84	436 aa		11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	GPR101	Q96P66	508 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	THUMPD2	Q9BTF0	503 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	RRP7A	Q9Y3A4	280 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	TLL2	Q9Y6L7	1015 aa		11.43	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	CCDC85C	A6NKD9	419 aa		11.42	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	PPIP5K2	O43314	1243 aa		11.42	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	HTATSF1	O43719	755 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	ECE1	P42892	770 aa		11.42	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	KIF6	Q6ZMV9	814 aa		11.42	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	USP50	Q70EL3	339 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	RBM17	Q96I25	401 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	EIF4A1	P60842	406 aa	Known RBP	11.41	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	ZNF34	Q8IZ26	560 aa		11.41	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	CRAMP1	Q96RY5	1269 aa		11.41	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	BEGAIN	Q9BUH8	593 aa		11.41	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	GPRC5D	Q9NZD1	345 aa		11.41	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	KDM3B	Q7LBC6	1761 aa		11.41	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	ABCC4	O15439	1325 aa		11.4	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	CELF2	O95319	508 aa	Known RBP	11.4	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	GMPS	P49915	693 aa	Predicted RBP	11.4	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	SAPCD2	Q86UD0	394 aa		11.4	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	ADARB2	Q9NS39	739 aa	Known RBP	11.4	□□□□□ -0.58
CDK5RAP1-213	ENST00000482967	SHTN1	A0MZ66	631 aa		11.39	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	MLLT1	Q03111	559 aa	Predicted RBP	11.39	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	CXCL9	Q07325	125 aa		11.39	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	GRIPAP1	Q4V328	841 aa		11.39	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.39	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	TRPM4	Q8TD43	1214 aa		11.39	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	ATP6V0A2	Q9Y487	856 aa		11.39	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	NUP98	P52948	1817 aa		11.39	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	ANXA1	P04083	346 aa		11.38	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	HIRA	P54198	1017 aa	Predicted RBP	11.38	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	PROSER3	Q2NL68	480 aa		11.38	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	LRP10	Q7Z4F1	713 aa		11.38	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	PNISR	Q8TF01	805 aa	Known RBP	11.38	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	MCOLN1	Q9GZU1	580 aa		11.38	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	ZNF408	Q9H9D4	720 aa		11.38	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	ZNRF3	Q9ULT6	936 aa		11.38	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	RAD17	O75943	681 aa		11.37	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	MAP2K2	P36507	400 aa		11.37	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	RGS19	P49795	217 aa		11.37	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	PDIA6	Q15084	440 aa		11.37	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	DLK2	Q6UY11	383 aa		11.37	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	PLEKHF1	Q96S99	279 aa		11.37	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	ZIC5	Q96T25	663 aa		11.37	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.37	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	TRPM7	Q96QT4	1865 aa		11.37	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	YDJC	A8MPS7	323 aa		11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	HCLS1	P14317	486 aa	Predicted RBP	11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	NFE2L2	Q16236	605 aa		11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	PARP10	Q53GL7	1025 aa		11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	CIAPIN1	Q6FI81	312 aa		11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	DPP8	Q6V1X1	898 aa	Predicted RBP	11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	PPP1R42	Q7Z4L9	355 aa		11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	ZNF428	Q96B54	188 aa		11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	CFAP44	Q96MT7	982 aa		11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	NLRP3	Q96P20	1036 aa		11.36	□□□□□ -0.59
CDK5RAP1-213	ENST00000482967	UTP14A	Q9BVJ6	771 aa	Known RBP	11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms