RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 LBX1P52954 281 aa15.59■□□□□ 0.09
TSPAN1-208ENST00000482928 HDAC1Q13547 482 aaPredicted RBP15.59■□□□□ 0.09
TSPAN1-208ENST00000482928 BEND3Q5T5X7 828 aa15.59■□□□□ 0.09
TSPAN1-208ENST00000482928 ZBTB47Q9UFB7 747 aaPredicted RBP15.59■□□□□ 0.09
TSPAN1-208ENST00000482928 RPAP2Q8IXW5 612 aaPredicted RBP15.58■□□□□ 0.08
TSPAN1-208ENST00000482928 AKT1S1Q96B36 256 aa15.58■□□□□ 0.08
TSPAN1-208ENST00000482928 SLC4A9Q96Q91 983 aa15.58■□□□□ 0.08
TSPAN1-208ENST00000482928 ZBTB3Q9H5J0 574 aa15.58■□□□□ 0.08
TSPAN1-208ENST00000482928 CCNL1Q9UK58 526 aaPredicted RBP15.58■□□□□ 0.08
TSPAN1-208ENST00000482928 KDM2BQ8NHM5 1336 aa15.58■□□□□ 0.08
TSPAN1-208ENST00000482928 IGHDP01880 384 aa15.57■□□□□ 0.08
TSPAN1-208ENST00000482928 HMGB2P26583 209 aaKnown RBP15.57■□□□□ 0.08
TSPAN1-208ENST00000482928 IL6STP40189 918 aaPredicted RBP15.57■□□□□ 0.08
TSPAN1-208ENST00000482928 CRKLP46109 303 aaKnown RBP15.57■□□□□ 0.08
TSPAN1-208ENST00000482928 LRP10Q7Z4F1 713 aa15.57■□□□□ 0.08
TSPAN1-208ENST00000482928 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
TSPAN1-208ENST00000482928 ZBTB1Q9Y2K1 713 aa15.57■□□□□ 0.08
TSPAN1-208ENST00000482928 ARFGEF2Q9Y6D5 1785 aa15.57■□□□□ 0.08
TSPAN1-208ENST00000482928 CWF19L2Q2TBE0 894 aaKnown RBP15.56■□□□□ 0.08
TSPAN1-208ENST00000482928 TTLL7Q6ZT98 887 aa15.56■□□□□ 0.08
TSPAN1-208ENST00000482928 ZNF831Q5JPB2 1677 aa15.56■□□□□ 0.08
TSPAN1-208ENST00000482928 ITPK1Q13572 414 aa15.55■□□□□ 0.08
TSPAN1-208ENST00000482928 HSP90AB3PQ58FF7 597 aa15.55■□□□□ 0.08
TSPAN1-208ENST00000482928 PRPF38BQ5VTL8 546 aaKnown RBP15.55■□□□□ 0.08
TSPAN1-208ENST00000482928 MKRN1Q9UHC7 482 aaKnown RBP15.55■□□□□ 0.08
TSPAN1-208ENST00000482928 A0A087WZG4 1122 aa15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 NEURL1BA8MQ27 555 aa15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 GRM8O00222 908 aa15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 MSH5O43196 834 aa15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 MSL1Q68DK7 614 aa15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 DZIP3Q86Y13 1208 aaKnown RBP15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 ANKRD44Q8N8A2 993 aa15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 GCC1Q96CN9 775 aa15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 USP44Q9H0E7 712 aa15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 LRRFIP2Q9Y608 721 aaKnown RBP15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 AFDNP55196 1824 aaKnown RBP15.54■□□□□ 0.08
TSPAN1-208ENST00000482928 MAP3K15Q6ZN16 1313 aa15.53■□□□□ 0.08
TSPAN1-208ENST00000482928 CEP85Q6P2H3 762 aa15.53■□□□□ 0.08
TSPAN1-208ENST00000482928 LRRC4BQ9NT99 713 aa15.53■□□□□ 0.08
TSPAN1-208ENST00000482928 CWC25Q9NXE8 425 aaPredicted RBP15.53■□□□□ 0.08
TSPAN1-208ENST00000482928 COL5A3P25940 1745 aaPredicted RBP15.52■□□□□ 0.08
TSPAN1-208ENST00000482928 CNTNAP4Q9C0A0 1308 aa15.52■□□□□ 0.08
TSPAN1-208ENST00000482928 ATP5J2-PTCD1G3V325 749 aa15.52■□□□□ 0.08
TSPAN1-208ENST00000482928 GCKRQ14397 625 aa15.52■□□□□ 0.08
TSPAN1-208ENST00000482928 INTS5Q6P9B9 1019 aaKnown RBP15.52■□□□□ 0.08
TSPAN1-208ENST00000482928 IGKV5-2P06315 115 aa15.51■□□□□ 0.07
TSPAN1-208ENST00000482928 NBPF7P0C2Y1 421 aaPredicted RBP15.51■□□□□ 0.07
TSPAN1-208ENST00000482928 LINC00116Q8NCU8 138 aa15.51■□□□□ 0.07
TSPAN1-208ENST00000482928 AK7Q96M32 723 aa15.51■□□□□ 0.07
TSPAN1-208ENST00000482928 RRAGCQ9HB90 399 aa15.51■□□□□ 0.07
TSPAN1-208ENST00000482928 TBC1D2BQ9UPU7 963 aa15.51■□□□□ 0.07
TSPAN1-208ENST00000482928 ZNF652Q9Y2D9 606 aa15.51■□□□□ 0.07
TSPAN1-208ENST00000482928 IBTKQ9P2D0 1353 aaPredicted RBP15.5■□□□□ 0.07
TSPAN1-208ENST00000482928 ERVV-1B6SEH8 477 aa15.5■□□□□ 0.07
TSPAN1-208ENST00000482928 EIF5P55010 431 aaKnown RBP15.5■□□□□ 0.07
TSPAN1-208ENST00000482928 TCIRG1Q13488 830 aa15.5■□□□□ 0.07
TSPAN1-208ENST00000482928 SLC27A3Q5K4L6 730 aa15.5■□□□□ 0.07
TSPAN1-208ENST00000482928 RC3H1Q5TC82 1133 aaKnown RBP15.5■□□□□ 0.07
TSPAN1-208ENST00000482928 CCDC191Q8NCU4 936 aa15.5■□□□□ 0.07
TSPAN1-208ENST00000482928 LY75O60449 1722 aa15.5■□□□□ 0.07
TSPAN1-208ENST00000482928 COL15A1P39059 1388 aa15.49■□□□□ 0.07
TSPAN1-208ENST00000482928 GNPATO15228 680 aa15.49■□□□□ 0.07
TSPAN1-208ENST00000482928 RGS3P49796 1198 aa15.49■□□□□ 0.07
TSPAN1-208ENST00000482928 KCNQ4P56696 695 aa15.49■□□□□ 0.07
TSPAN1-208ENST00000482928 ATP8B2P98198 1209 aa15.49■□□□□ 0.07
TSPAN1-208ENST00000482928 GIGYF2Q6Y7W6 1299 aaKnown RBP15.49■□□□□ 0.07
TSPAN1-208ENST00000482928 SMC5Q8IY18 1101 aa15.49■□□□□ 0.07
TSPAN1-208ENST00000482928 PDZRN3Q9UPQ7 1066 aa15.49■□□□□ 0.07
TSPAN1-208ENST00000482928 RTCBQ9Y3I0 505 aaKnown RBP15.49■□□□□ 0.07
TSPAN1-208ENST00000482928 UTYO14607 1347 aa15.48■□□□□ 0.07
TSPAN1-208ENST00000482928 DLL1O00548 723 aa15.48■□□□□ 0.07
TSPAN1-208ENST00000482928 SRGAP3O43295 1099 aa15.48■□□□□ 0.07
TSPAN1-208ENST00000482928 UBE3BQ7Z3V4 1068 aa15.48■□□□□ 0.07
TSPAN1-208ENST00000482928 ANKRD45Q5TZF3 282 aa15.47■□□□□ 0.07
TSPAN1-208ENST00000482928 SIRT2Q8IXJ6 389 aa15.47■□□□□ 0.07
TSPAN1-208ENST00000482928 ZPR1O75312 459 aa15.46■□□□□ 0.07
TSPAN1-208ENST00000482928 RPS6KA4O75676 772 aa15.46■□□□□ 0.07
TSPAN1-208ENST00000482928 HSPA8P11142 646 aaKnown RBP15.46■□□□□ 0.07
TSPAN1-208ENST00000482928 GPTP24298 496 aa15.46■□□□□ 0.07
TSPAN1-208ENST00000482928 HSP90AB4PQ58FF6 505 aa15.46■□□□□ 0.07
TSPAN1-208ENST00000482928 PPP1R42Q7Z4L9 355 aa15.46■□□□□ 0.07
TSPAN1-208ENST00000482928 SUCLG2Q96I99 432 aa15.46■□□□□ 0.07
TSPAN1-208ENST00000482928 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.07
TSPAN1-208ENST00000482928 DCTPP1Q9H773 170 aa15.46■□□□□ 0.07
TSPAN1-208ENST00000482928 ANKRD36CQ5JPF3 1778 aa15.45■□□□□ 0.06
TSPAN1-208ENST00000482928 APBB1O00213 710 aa15.45■□□□□ 0.06
TSPAN1-208ENST00000482928 NUCB1Q02818 461 aa15.45■□□□□ 0.06
TSPAN1-208ENST00000482928 TRIM28Q13263 835 aaKnown RBP15.45■□□□□ 0.06
TSPAN1-208ENST00000482928 OS9Q13438 667 aaPredicted RBP15.45■□□□□ 0.06
TSPAN1-208ENST00000482928 CHD1LQ86WJ1 897 aa15.45■□□□□ 0.06
TSPAN1-208ENST00000482928 BCL11AQ9H165 835 aa15.45■□□□□ 0.06
TSPAN1-208ENST00000482928 BICC1Q9H694 974 aaKnown RBP15.45■□□□□ 0.06
TSPAN1-208ENST00000482928 C4BP0C0L5 1744 aa15.44■□□□□ 0.06
TSPAN1-208ENST00000482928 HLFQ16534 295 aa15.44■□□□□ 0.06
TSPAN1-208ENST00000482928 RTL5Q5HYW3 569 aaPredicted RBP15.44■□□□□ 0.06
TSPAN1-208ENST00000482928 CHMP3Q9Y3E7 222 aa15.44■□□□□ 0.06
TSPAN1-208ENST00000482928 TAF1LQ8IZX4 1826 aa15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 PNMA6EA0A0J9YXQ4 647 aa15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 H7C1W4 665 aa15.43■□□□□ 0.06
TSPAN1-208ENST00000482928 PHF14O94880 888 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms