RNA–Protein interactions for RNA: ENST00000482896.5

CLASP2-215, Transcript of cytoplasmic linker associated protein 2, human

TSL 4

Gene CLASP2, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASP2-215	ENST00000482896	DDR1	Q08345	913 aa		13.67	□□□□□ -0.22
CLASP2-215	ENST00000482896	DOK7	Q18PE1	504 aa		13.67	□□□□□ -0.22
CLASP2-215	ENST00000482896	ZBTB1	Q9Y2K1	713 aa		13.67	□□□□□ -0.22
CLASP2-215	ENST00000482896	NEFM	P07197	916 aa		13.66	□□□□□ -0.22
CLASP2-215	ENST00000482896	PPP2R1A	P30153	589 aa		13.66	□□□□□ -0.22
CLASP2-215	ENST00000482896	NFIX	Q14938	502 aa		13.66	□□□□□ -0.22
CLASP2-215	ENST00000482896	CLEC4G	Q6UXB4	293 aa		13.66	□□□□□ -0.22
CLASP2-215	ENST00000482896	ARHGAP27	Q6ZUM4	889 aa		13.66	□□□□□ -0.22
CLASP2-215	ENST00000482896	DDX12P	Q92771	950 aa		13.66	□□□□□ -0.22
CLASP2-215	ENST00000482896	ZNF496	Q96IT1	587 aa	Predicted RBP	13.66	□□□□□ -0.22
CLASP2-215	ENST00000482896	KCP	Q6ZWJ8	1503 aa		13.65	□□□□□ -0.22
CLASP2-215	ENST00000482896	C4A	P0C0L4	1744 aa		13.65	□□□□□ -0.22
CLASP2-215	ENST00000482896	KIF13B	Q9NQT8	1826 aa		13.65	□□□□□ -0.22
CLASP2-215	ENST00000482896	BTBD11	A6QL63	1104 aa		13.65	□□□□□ -0.22
CLASP2-215	ENST00000482896	TOMM70	O94826	608 aa		13.65	□□□□□ -0.22
CLASP2-215	ENST00000482896	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.65	□□□□□ -0.22
CLASP2-215	ENST00000482896	PRKAR2B	P31323	418 aa		13.65	□□□□□ -0.22
CLASP2-215	ENST00000482896	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
CLASP2-215	ENST00000482896	SCN11A	Q9UI33	1791 aa		13.65	□□□□□ -0.22
CLASP2-215	ENST00000482896	SERPINB2	P05120	415 aa		13.64	□□□□□ -0.23
CLASP2-215	ENST00000482896	HSPA6	P17066	643 aa		13.64	□□□□□ -0.23
CLASP2-215	ENST00000482896	PDE6B	P35913	854 aa		13.64	□□□□□ -0.23
CLASP2-215	ENST00000482896	GPIHBP1	Q8IV16	184 aa		13.64	□□□□□ -0.23
CLASP2-215	ENST00000482896	PNISR	Q8TF01	805 aa	Known RBP	13.64	□□□□□ -0.23
CLASP2-215	ENST00000482896	BRIP1	Q9BX63	1249 aa		13.64	□□□□□ -0.23
CLASP2-215	ENST00000482896	CEP350	Q5VT06	3117 aa		13.63	□□□□□ -0.23
CLASP2-215	ENST00000482896		H0YIN7	160 aa		13.63	□□□□□ -0.23
CLASP2-215	ENST00000482896	RIMBP2	O15034	1052 aa		13.63	□□□□□ -0.23
CLASP2-215	ENST00000482896	SNRPA1	P09661	255 aa	Known RBP	13.63	□□□□□ -0.23
CLASP2-215	ENST00000482896	TTLL6	Q8N841	843 aa		13.63	□□□□□ -0.23
CLASP2-215	ENST00000482896	PHACTR3	Q96KR7	559 aa		13.63	□□□□□ -0.23
CLASP2-215	ENST00000482896	BCL2L12	Q9HB09	334 aa		13.63	□□□□□ -0.23
CLASP2-215	ENST00000482896	MYH14	Q7Z406	1995 aa	Known RBP	13.63	□□□□□ -0.23
CLASP2-215	ENST00000482896	KDM2B	Q8NHM5	1336 aa		13.63	□□□□□ -0.23
CLASP2-215	ENST00000482896	CANX	P27824	592 aa	Known RBP	13.62	□□□□□ -0.23
CLASP2-215	ENST00000482896	ZNF652	Q9Y2D9	606 aa		13.62	□□□□□ -0.23
CLASP2-215	ENST00000482896	CARMIL3	Q8ND23	1372 aa		13.61	□□□□□ -0.23
CLASP2-215	ENST00000482896	HOXB3	P14651	431 aa	Predicted RBP	13.61	□□□□□ -0.23
CLASP2-215	ENST00000482896	OSBP	P22059	807 aa		13.61	□□□□□ -0.23
CLASP2-215	ENST00000482896	TAF7	Q15545	349 aa	Predicted RBP	13.61	□□□□□ -0.23
CLASP2-215	ENST00000482896	SOGA3	Q5TF21	947 aa		13.61	□□□□□ -0.23
CLASP2-215	ENST00000482896	C9orf131	Q5VYM1	1079 aa		13.61	□□□□□ -0.23
CLASP2-215	ENST00000482896	SETDB2	Q96T68	719 aa		13.61	□□□□□ -0.23
CLASP2-215	ENST00000482896	FSTL1	Q12841	308 aa		13.6	□□□□□ -0.23
CLASP2-215	ENST00000482896	RBM46	Q8TBY0	533 aa	Known RBP	13.6	□□□□□ -0.23
CLASP2-215	ENST00000482896	PCDH10	Q9P2E7	1040 aa		13.6	□□□□□ -0.23
CLASP2-215	ENST00000482896	TJP1	Q07157	1748 aa		13.59	□□□□□ -0.23
CLASP2-215	ENST00000482896	LMNB1	P20700	586 aa		13.59	□□□□□ -0.23
CLASP2-215	ENST00000482896	APLP1	P51693	650 aa		13.59	□□□□□ -0.23
CLASP2-215	ENST00000482896	BABAM1	Q9NWV8	329 aa		13.59	□□□□□ -0.23
CLASP2-215	ENST00000482896	CAMTA2	O94983	1202 aa		13.58	□□□□□ -0.24
CLASP2-215	ENST00000482896	CHRNA5	P30532	468 aa		13.58	□□□□□ -0.24
CLASP2-215	ENST00000482896	RALBP1	Q15311	655 aa		13.58	□□□□□ -0.24
CLASP2-215	ENST00000482896	C2CD5	Q86YS7	1000 aa		13.58	□□□□□ -0.24
CLASP2-215	ENST00000482896	ZNF710	Q8N1W2	664 aa		13.58	□□□□□ -0.24
CLASP2-215	ENST00000482896	CNKSR1	Q969H4	720 aa		13.58	□□□□□ -0.24
CLASP2-215	ENST00000482896	FAM163A	Q96GL9	167 aa	Predicted RBP	13.58	□□□□□ -0.24
CLASP2-215	ENST00000482896	ZSWIM6	Q9HCJ5	1215 aa		13.58	□□□□□ -0.24
CLASP2-215	ENST00000482896	ZMYND10	O75800	440 aa		13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	ST5	P78524	1137 aa		13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	TBC1D9B	Q66K14	1250 aa		13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	STYK1	Q6J9G0	422 aa		13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	DZIP3	Q86Y13	1208 aa	Known RBP	13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	CNBD1	Q8NA66	436 aa		13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	ZNF526	Q8TF50	670 aa	Predicted RBP	13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	RNF181	Q9P0P0	153 aa		13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	WWC3	Q9ULE0	1092 aa		13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	LTBP3	Q9NS15	1303 aa		13.57	□□□□□ -0.24
CLASP2-215	ENST00000482896	KLRG2	A4D1S0	409 aa	Predicted RBP	13.56	□□□□□ -0.24
CLASP2-215	ENST00000482896	SNPH	O15079	494 aa		13.56	□□□□□ -0.24
CLASP2-215	ENST00000482896	A1BG	P04217	495 aa		13.56	□□□□□ -0.24
CLASP2-215	ENST00000482896	ARSI	Q5FYB1	569 aa		13.56	□□□□□ -0.24
CLASP2-215	ENST00000482896	PRR5L	Q6MZQ0	368 aa		13.56	□□□□□ -0.24
CLASP2-215	ENST00000482896	TPTE2	Q6XPS3	522 aa		13.56	□□□□□ -0.24
CLASP2-215	ENST00000482896	TBC1D2B	Q9UPU7	963 aa		13.56	□□□□□ -0.24
CLASP2-215	ENST00000482896	USP16	Q9Y5T5	823 aa		13.56	□□□□□ -0.24
CLASP2-215	ENST00000482896	KIAA1551	Q9HCM1	1747 aa		13.56	□□□□□ -0.24
CLASP2-215	ENST00000482896	GLTPD2	A6NH11	291 aa		13.55	□□□□□ -0.24
CLASP2-215	ENST00000482896	ERVV-1	B6SEH8	477 aa		13.55	□□□□□ -0.24
CLASP2-215	ENST00000482896	MASTL	Q96GX5	879 aa		13.55	□□□□□ -0.24
CLASP2-215	ENST00000482896	PLEKHF1	Q96S99	279 aa		13.55	□□□□□ -0.24
CLASP2-215	ENST00000482896	ERBB4	Q15303	1308 aa		13.55	□□□□□ -0.24
CLASP2-215	ENST00000482896	UBR2	Q8IWV8	1755 aa		13.55	□□□□□ -0.24
CLASP2-215	ENST00000482896	NPHP1	O15259	732 aa		13.54	□□□□□ -0.24
CLASP2-215	ENST00000482896	VEGFA	P15692	232 aa	Predicted RBP	13.54	□□□□□ -0.24
CLASP2-215	ENST00000482896	NFE2L2	Q16236	605 aa		13.54	□□□□□ -0.24
CLASP2-215	ENST00000482896	GRIPAP1	Q4V328	841 aa		13.54	□□□□□ -0.24
CLASP2-215	ENST00000482896	MCM10	Q7L590	875 aa		13.54	□□□□□ -0.24
CLASP2-215	ENST00000482896	EPAS1	Q99814	870 aa		13.54	□□□□□ -0.24
CLASP2-215	ENST00000482896	NRXN2	Q9P2S2	1712 aa		13.53	□□□□□ -0.24
CLASP2-215	ENST00000482896	SRGN	P10124	158 aa		13.53	□□□□□ -0.24
CLASP2-215	ENST00000482896	LMOD3	Q0VAK6	560 aa		13.53	□□□□□ -0.24
CLASP2-215	ENST00000482896	CNGB1	Q14028	1251 aa	Predicted RBP	13.53	□□□□□ -0.24
CLASP2-215	ENST00000482896	KCNQ3	O43525	872 aa		13.52	□□□□□ -0.25
CLASP2-215	ENST00000482896	NUDT7	P0C024	238 aa		13.52	□□□□□ -0.25
CLASP2-215	ENST00000482896	GPR153	Q6NV75	609 aa		13.52	□□□□□ -0.25
CLASP2-215	ENST00000482896	BICDL1	Q6ZP65	573 aa		13.52	□□□□□ -0.25
CLASP2-215	ENST00000482896	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.52	□□□□□ -0.25
CLASP2-215	ENST00000482896	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.52	□□□□□ -0.25	2e-6	■■□□□ 14.2

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms