RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 RNF123Q5XPI4 1314 aa20.29■□□□□ 0.84
COL16A1-212ENST00000482478 LTBP3Q9NS15 1303 aa20.29■□□□□ 0.84
COL16A1-212ENST00000482478 CRY2Q49AN0 593 aa20.29■□□□□ 0.84
COL16A1-212ENST00000482478 TSR2Q969E8 191 aaKnown RBP20.29■□□□□ 0.84
COL16A1-212ENST00000482478 HYPKQ9NX55 129 aa20.29■□□□□ 0.84
COL16A1-212ENST00000482478 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
COL16A1-212ENST00000482478 ALDH1B1P30837 517 aa20.28■□□□□ 0.84
COL16A1-212ENST00000482478 GOLGA2Q08379 1002 aa20.28■□□□□ 0.84
COL16A1-212ENST00000482478 CCDC27Q2M243 656 aa20.27■□□□□ 0.84
COL16A1-212ENST00000482478 NLRP10Q86W26 655 aa20.27■□□□□ 0.84
COL16A1-212ENST00000482478 PLBD2Q8NHP8 589 aa20.27■□□□□ 0.84
COL16A1-212ENST00000482478 ZNF428Q96B54 188 aa20.27■□□□□ 0.84
COL16A1-212ENST00000482478 RBM17Q96I25 401 aaKnown RBP20.27■□□□□ 0.84
COL16A1-212ENST00000482478 TCIRG1Q13488 830 aa20.26■□□□□ 0.83
COL16A1-212ENST00000482478 OLFM4Q6UX06 510 aa20.26■□□□□ 0.83
COL16A1-212ENST00000482478 C3orf67Q6ZVT6 689 aa20.26■□□□□ 0.83
COL16A1-212ENST00000482478 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
COL16A1-212ENST00000482478 TRMT112Q9UI30 125 aaKnown RBP20.26■□□□□ 0.83
COL16A1-212ENST00000482478 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
COL16A1-212ENST00000482478 SH3TC1Q8TE82 1336 aa20.26■□□□□ 0.83
COL16A1-212ENST00000482478 DICER1Q9UPY3 1922 aaKnown RBP20.25■□□□□ 0.83
COL16A1-212ENST00000482478 PPEF1O14829 653 aaPredicted RBP20.25■□□□□ 0.83
COL16A1-212ENST00000482478 FAM9BQ8IZU0 186 aa20.25■□□□□ 0.83
COL16A1-212ENST00000482478 C8orf58Q8NAV2 365 aa20.25■□□□□ 0.83
COL16A1-212ENST00000482478 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
COL16A1-212ENST00000482478 LAMB2P55268 1798 aa20.25■□□□□ 0.83
COL16A1-212ENST00000482478 TOMM70O94826 608 aa20.24■□□□□ 0.83
COL16A1-212ENST00000482478 FKBP4Q02790 459 aaKnown RBP eCLIP20.24■□□□□ 0.83
COL16A1-212ENST00000482478 ANKRD13DQ6ZTN6 518 aa20.24■□□□□ 0.83
COL16A1-212ENST00000482478 RIC3Q7Z5B4 369 aa20.24■□□□□ 0.83
COL16A1-212ENST00000482478 RTKN2Q8IZC4 609 aa20.24■□□□□ 0.83
COL16A1-212ENST00000482478 CCDC30Q5VVM6 783 aa20.23■□□□□ 0.83
COL16A1-212ENST00000482478 C7orf43Q8WVR3 580 aa20.23■□□□□ 0.83
COL16A1-212ENST00000482478 RRAGCQ9HB90 399 aa20.23■□□□□ 0.83
COL16A1-212ENST00000482478 ZNF277Q9NRM2 450 aaPredicted RBP20.23■□□□□ 0.83
COL16A1-212ENST00000482478 DDX60Q8IY21 1712 aaKnown RBP20.22■□□□□ 0.83
COL16A1-212ENST00000482478 GLTPD2A6NH11 291 aa20.22■□□□□ 0.83
COL16A1-212ENST00000482478 ATP5J2-PTCD1G3V325 749 aa20.22■□□□□ 0.83
COL16A1-212ENST00000482478 TCERG1O14776 1098 aaKnown RBP20.22■□□□□ 0.83
COL16A1-212ENST00000482478 HCLS1P14317 486 aaPredicted RBP20.22■□□□□ 0.83
COL16A1-212ENST00000482478 STK31Q9BXU1 1019 aa20.22■□□□□ 0.83
COL16A1-212ENST00000482478 CHMP4AQ9BY43 222 aa20.22■□□□□ 0.83
COL16A1-212ENST00000482478 TMX4Q9H1E5 349 aaPredicted RBP20.22■□□□□ 0.83
COL16A1-212ENST00000482478 ABCC4O15439 1325 aa20.22■□□□□ 0.83
COL16A1-212ENST00000482478 IL16Q14005 1332 aa20.22■□□□□ 0.83
COL16A1-212ENST00000482478 FANCIQ9NVI1 1328 aa20.22■□□□□ 0.83
COL16A1-212ENST00000482478 HSPA6P17066 643 aa20.21■□□□□ 0.83
COL16A1-212ENST00000482478 DPY19L2Q6NUT2 758 aa20.21■□□□□ 0.83
COL16A1-212ENST00000482478 TSPYL6Q8N831 410 aa20.21■□□□□ 0.83
COL16A1-212ENST00000482478 PHAXQ9H814 394 aaKnown RBP20.21■□□□□ 0.83
COL16A1-212ENST00000482478 WDR90Q96KV7 1748 aa20.21■□□□□ 0.83
COL16A1-212ENST00000482478 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
COL16A1-212ENST00000482478 HOXA10P31260 410 aaPredicted RBP20.2■□□□□ 0.82
COL16A1-212ENST00000482478 CRAMP1Q96RY5 1269 aa20.2■□□□□ 0.82
COL16A1-212ENST00000482478 SNED1Q8TER0 1413 aa20.19■□□□□ 0.82
COL16A1-212ENST00000482478 IARSP41252 1262 aaKnown RBP20.19■□□□□ 0.82
COL16A1-212ENST00000482478 TWISTNBQ3B726 338 aaPredicted RBP20.19■□□□□ 0.82
COL16A1-212ENST00000482478 CC2D2BQ6DHV5 1058 aa20.19■□□□□ 0.82
COL16A1-212ENST00000482478 RBM46Q8TBY0 533 aaKnown RBP20.19■□□□□ 0.82
COL16A1-212ENST00000482478 MYD88Q99836 296 aa20.19■□□□□ 0.82
COL16A1-212ENST00000482478 ISCA1Q9BUE6 129 aa20.19■□□□□ 0.82
COL16A1-212ENST00000482478 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
COL16A1-212ENST00000482478 DDX46Q7L014 1031 aaKnown RBP20.18■□□□□ 0.82
COL16A1-212ENST00000482478 SLC51AQ86UW1 340 aa20.18■□□□□ 0.82
COL16A1-212ENST00000482478 SYNE4Q8N205 404 aa20.18■□□□□ 0.82
COL16A1-212ENST00000482478 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
COL16A1-212ENST00000482478 SLC10A5Q5PT55 438 aa20.17■□□□□ 0.82
COL16A1-212ENST00000482478 FAM89AQ96GI7 184 aa20.17■□□□□ 0.82
COL16A1-212ENST00000482478 PSMD1Q99460 953 aa20.17■□□□□ 0.82
COL16A1-212ENST00000482478 ZNF541Q9H0D2 1346 aa20.17■□□□□ 0.82
COL16A1-212ENST00000482478 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
COL16A1-212ENST00000482478 SMC1BQ8NDV3 1235 aa20.15■□□□□ 0.82
COL16A1-212ENST00000482478 GRAPQ13588 217 aa20.14■□□□□ 0.81
COL16A1-212ENST00000482478 GRIPAP1Q4V328 841 aa20.14■□□□□ 0.81
COL16A1-212ENST00000482478 WDR63Q8IWG1 891 aa20.14■□□□□ 0.81
COL16A1-212ENST00000482478 GRAPLQ8TC17 118 aaPredicted RBP20.14■□□□□ 0.81
COL16A1-212ENST00000482478 JDP2Q8WYK2 163 aa20.14■□□□□ 0.81
COL16A1-212ENST00000482478 MAP3K2Q9Y2U5 619 aa20.14■□□□□ 0.81
COL16A1-212ENST00000482478 LRRC37AA6NMS7 1700 aa20.13■□□□□ 0.81
COL16A1-212ENST00000482478 IRS4O14654 1257 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-212ENST00000482478 DDNO94850 711 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-212ENST00000482478 FSTL1Q12841 308 aa20.13■□□□□ 0.81
COL16A1-212ENST00000482478 LARGE2Q8N3Y3 721 aa20.13■□□□□ 0.81
COL16A1-212ENST00000482478 CWC25Q9NXE8 425 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-212ENST00000482478 ATP6V0A2Q9Y487 856 aa20.13■□□□□ 0.81
COL16A1-212ENST00000482478 COL4A5P29400 1685 aa20.13■□□□□ 0.81
COL16A1-212ENST00000482478 PPIP5K2O43314 1243 aa20.12■□□□□ 0.81
COL16A1-212ENST00000482478 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
COL16A1-212ENST00000482478 IQCA1LA6NCM1 817 aa20.11■□□□□ 0.81
COL16A1-212ENST00000482478 HSP90B1P14625 803 aaKnown RBP20.11■□□□□ 0.81
COL16A1-212ENST00000482478 APLP1P51693 650 aa20.11■□□□□ 0.81
COL16A1-212ENST00000482478 NEXNQ0ZGT2 675 aa20.11■□□□□ 0.81
COL16A1-212ENST00000482478 DPP8Q6V1X1 898 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-212ENST00000482478 NIM1KQ8IY84 436 aa20.11■□□□□ 0.81
COL16A1-212ENST00000482478 ZBTB38Q8NAP3 1195 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-212ENST00000482478 METTL22Q9BUU2 404 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-212ENST00000482478 PI4KAP2A4QPH2 592 aa20.1■□□□□ 0.81
COL16A1-212ENST00000482478 TRIM28Q13263 835 aaKnown RBP20.1■□□□□ 0.81
COL16A1-212ENST00000482478 KSR2Q6VAB6 950 aa20.1■□□□□ 0.81
COL16A1-212ENST00000482478 PI4KAP1Q8N8J0 262 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms