RNA–Protein interactions for RNA: ENST00000482396.5

SFMBT1-204, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 2

Gene SFMBT1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-204ENST00000482396 DDX60Q8IY21 1712 aaKnown RBP25.63■■□□□ 1.69
SFMBT1-204ENST00000482396 CRY2Q49AN0 593 aa25.62■■□□□ 1.69
SFMBT1-204ENST00000482396 C3orf67Q6ZVT6 689 aa25.62■■□□□ 1.69
SFMBT1-204ENST00000482396 NPR1P16066 1061 aa25.61■■□□□ 1.69
SFMBT1-204ENST00000482396 GTF2E1P29083 439 aaPredicted RBP25.61■■□□□ 1.69
SFMBT1-204ENST00000482396 PPP1R42Q7Z4L9 355 aa25.61■■□□□ 1.69
SFMBT1-204ENST00000482396 SYNE4Q8N205 404 aa25.61■■□□□ 1.69
SFMBT1-204ENST00000482396 C7orf43Q8WVR3 580 aa25.61■■□□□ 1.69
SFMBT1-204ENST00000482396 CNKSR1Q969H4 720 aa25.61■■□□□ 1.69
SFMBT1-204ENST00000482396 TCERG1O14776 1098 aaKnown RBP25.6■■□□□ 1.69
SFMBT1-204ENST00000482396 VAMP4O75379 141 aa25.6■■□□□ 1.69
SFMBT1-204ENST00000482396 RASSF7Q02833 373 aa25.6■■□□□ 1.69
SFMBT1-204ENST00000482396 EXOSC9Q06265 439 aaKnown RBP25.6■■□□□ 1.69
SFMBT1-204ENST00000482396 SLC10A5Q5PT55 438 aa25.6■■□□□ 1.69
SFMBT1-204ENST00000482396 PRPF40BQ6NWY9 871 aaKnown RBP25.6■■□□□ 1.69
SFMBT1-204ENST00000482396 UTP14AQ9BVJ6 771 aaKnown RBP25.6■■□□□ 1.69
SFMBT1-204ENST00000482396 DICER1Q9UPY3 1922 aaKnown RBP25.6■■□□□ 1.69
SFMBT1-204ENST00000482396 NFKBIEO00221 500 aa25.59■■□□□ 1.69
SFMBT1-204ENST00000482396 C21orf2O43822 256 aa25.59■■□□□ 1.69
SFMBT1-204ENST00000482396 TAF1P21675 1872 aa25.58■■□□□ 1.69
SFMBT1-204ENST00000482396 G2E3Q7L622 706 aa25.58■■□□□ 1.69
SFMBT1-204ENST00000482396 ZNF219Q9P2Y4 722 aaPredicted RBP25.58■■□□□ 1.69
SFMBT1-204ENST00000482396 ATP5J2-PTCD1G3V325 749 aa25.57■■□□□ 1.68
SFMBT1-204ENST00000482396 C9orf131Q5VYM1 1079 aa25.57■■□□□ 1.68
SFMBT1-204ENST00000482396 DIEXFQ68CQ4 756 aaKnown RBP25.57■■□□□ 1.68
SFMBT1-204ENST00000482396 ZNF428Q96B54 188 aa25.57■■□□□ 1.68
SFMBT1-204ENST00000482396 HOXA10P31260 410 aaPredicted RBP25.56■■□□□ 1.68
SFMBT1-204ENST00000482396 GOLGA2Q08379 1002 aa25.56■■□□□ 1.68
SFMBT1-204ENST00000482396 TRIM28Q13263 835 aaKnown RBP25.56■■□□□ 1.68
SFMBT1-204ENST00000482396 MIER1Q8N108 512 aa25.56■■□□□ 1.68
SFMBT1-204ENST00000482396 CHMP4AQ9BY43 222 aa25.56■■□□□ 1.68
SFMBT1-204ENST00000482396 RNF123Q5XPI4 1314 aa25.56■■□□□ 1.68
SFMBT1-204ENST00000482396 RIC3Q7Z5B4 369 aa25.54■■□□□ 1.68
SFMBT1-204ENST00000482396 TRMT112Q9UI30 125 aaKnown RBP25.54■■□□□ 1.68
SFMBT1-204ENST00000482396 TIAM2Q8IVF5 1701 aa25.54■■□□□ 1.68
SFMBT1-204ENST00000482396 SNED1Q8TER0 1413 aa25.54■■□□□ 1.68
SFMBT1-204ENST00000482396 SLC4A2P04920 1241 aa25.53■■□□□ 1.68
SFMBT1-204ENST00000482396 OLFM4Q6UX06 510 aa25.53■■□□□ 1.68
SFMBT1-204ENST00000482396 MYH16Q9H6N6 1097 aa25.53■■□□□ 1.68
SFMBT1-204ENST00000482396 HCLS1P14317 486 aaPredicted RBP25.52■■□□□ 1.68
SFMBT1-204ENST00000482396 ALDH1B1P30837 517 aa25.52■■□□□ 1.68
SFMBT1-204ENST00000482396 RNF181Q9P0P0 153 aa25.52■■□□□ 1.68
SFMBT1-204ENST00000482396 SLC51AQ86UW1 340 aa25.51■■□□□ 1.67
SFMBT1-204ENST00000482396 NLRP3Q96P20 1036 aa25.51■■□□□ 1.67
SFMBT1-204ENST00000482396 METTL22Q9BUU2 404 aaPredicted RBP25.51■■□□□ 1.67
SFMBT1-204ENST00000482396 STK31Q9BXU1 1019 aa25.51■■□□□ 1.67
SFMBT1-204ENST00000482396 SH3TC1Q8TE82 1336 aa25.51■■□□□ 1.67
SFMBT1-204ENST00000482396 PI4KAP2A4QPH2 592 aa25.5■■□□□ 1.67
SFMBT1-204ENST00000482396 LMNB1P20700 586 aa25.5■■□□□ 1.67
SFMBT1-204ENST00000482396 KSR2Q6VAB6 950 aa25.5■■□□□ 1.67
SFMBT1-204ENST00000482396 PI4KAP1Q8N8J0 262 aa25.5■■□□□ 1.67
SFMBT1-204ENST00000482396 FAM89AQ96GI7 184 aa25.5■■□□□ 1.67
SFMBT1-204ENST00000482396 CRAMP1Q96RY5 1269 aa25.5■■□□□ 1.67
SFMBT1-204ENST00000482396 MYD88Q99836 296 aa25.5■■□□□ 1.67
SFMBT1-204ENST00000482396 LTBP3Q9NS15 1303 aa25.5■■□□□ 1.67
SFMBT1-204ENST00000482396 MAP3K2Q9Y2U5 619 aa25.5■■□□□ 1.67
SFMBT1-204ENST00000482396 COL4A1P02462 1669 aa25.48■■□□□ 1.67
SFMBT1-204ENST00000482396 ZNF526Q8TF50 670 aaPredicted RBP25.48■■□□□ 1.67
SFMBT1-204ENST00000482396 RPGRQ92834 1020 aaKnown RBP25.48■■□□□ 1.67
SFMBT1-204ENST00000482396 DDX58O95786 925 aaKnown RBP25.47■■□□□ 1.67
SFMBT1-204ENST00000482396 IGKV5-2P06315 115 aa25.47■■□□□ 1.67
SFMBT1-204ENST00000482396 SLFN5Q08AF3 891 aa25.47■■□□□ 1.67
SFMBT1-204ENST00000482396 FLIIQ13045 1269 aa25.47■■□□□ 1.67
SFMBT1-204ENST00000482396 CCDC93Q567U6 631 aa25.46■■□□□ 1.67
SFMBT1-204ENST00000482396 SOGA3Q5TF21 947 aa25.46■■□□□ 1.67
SFMBT1-204ENST00000482396 CCDC191Q8NCU4 936 aa25.46■■□□□ 1.67
SFMBT1-204ENST00000482396 CDCA7LQ96GN5 454 aa25.46■■□□□ 1.67
SFMBT1-204ENST00000482396 RBM17Q96I25 401 aaKnown RBP25.46■■□□□ 1.67
SFMBT1-204ENST00000482396 ABCC4O15439 1325 aa25.45■■□□□ 1.66
SFMBT1-204ENST00000482396 RTL5Q5HYW3 569 aaPredicted RBP25.45■■□□□ 1.66
SFMBT1-204ENST00000482396 TRMT2AQ8IZ69 625 aaKnown RBP25.45■■□□□ 1.66
SFMBT1-204ENST00000482396 TAOK3Q9H2K8 898 aa25.45■■□□□ 1.66
SFMBT1-204ENST00000482396 GPBP1L1Q9HC44 474 aaPredicted RBP25.45■■□□□ 1.66
SFMBT1-204ENST00000482396 E9PSI1 815 aa25.44■■□□□ 1.66
SFMBT1-204ENST00000482396 ZBTB38Q8NAP3 1195 aaPredicted RBP25.44■■□□□ 1.66
SFMBT1-204ENST00000482396 MYH3P11055 1940 aa25.43■■□□□ 1.66
SFMBT1-204ENST00000482396 IRS4O14654 1257 aaPredicted RBP25.42■■□□□ 1.66
SFMBT1-204ENST00000482396 PCCAP05165 728 aaPredicted RBP25.42■■□□□ 1.66
SFMBT1-204ENST00000482396 SF3B3Q15393 1217 aaKnown RBP25.42■■□□□ 1.66
SFMBT1-204ENST00000482396 JARID2Q92833 1246 aaPredicted RBP25.42■■□□□ 1.66
SFMBT1-204ENST00000482396 CWC25Q9NXE8 425 aaPredicted RBP25.42■■□□□ 1.66
SFMBT1-204ENST00000482396 ZC3H4Q9UPT8 1303 aaKnown RBP25.41■■□□□ 1.66
SFMBT1-204ENST00000482396 LRRC37AA6NMS7 1700 aa25.41■■□□□ 1.66
SFMBT1-204ENST00000482396 KIF3CO14782 793 aa25.41■■□□□ 1.66
SFMBT1-204ENST00000482396 FKBP4Q02790 459 aaKnown RBP eCLIP25.41■■□□□ 1.66
SFMBT1-204ENST00000482396 CWF19L2Q2TBE0 894 aaKnown RBP25.41■■□□□ 1.66
SFMBT1-204ENST00000482396 PPEF1O14829 653 aaPredicted RBP25.4■■□□□ 1.66
SFMBT1-204ENST00000482396 RTKN2Q8IZC4 609 aa25.4■■□□□ 1.66
SFMBT1-204ENST00000482396 NEURL1BA8MQ27 555 aa25.39■■□□□ 1.66
SFMBT1-204ENST00000482396 FKBP5Q13451 457 aaPredicted RBP25.39■■□□□ 1.66
SFMBT1-204ENST00000482396 CC2D2BQ6DHV5 1058 aa25.39■■□□□ 1.66
SFMBT1-204ENST00000482396 NMRK2Q9NPI5 230 aa25.39■■□□□ 1.66
SFMBT1-204ENST00000482396 COL4A5P29400 1685 aa25.39■■□□□ 1.65
SFMBT1-204ENST00000482396 DNAAF4Q8WXU2 420 aa25.38■■□□□ 1.65
SFMBT1-204ENST00000482396 ZNF277Q9NRM2 450 aaPredicted RBP25.38■■□□□ 1.65
SFMBT1-204ENST00000482396 ATP6V0A2Q9Y487 856 aa25.38■■□□□ 1.65
SFMBT1-204ENST00000482396 GRAPQ13588 217 aa25.37■■□□□ 1.65
SFMBT1-204ENST00000482396 GRAPLQ8TC17 118 aaPredicted RBP25.37■■□□□ 1.65
SFMBT1-204ENST00000482396 PSMD1Q99460 953 aa25.37■■□□□ 1.65
SFMBT1-204ENST00000482396 CDHR2Q9BYE9 1310 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms